RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 PTRHD1Q6GMV3 140 aaKnown RBP1.59□□□□□ -2.15
CLK1-208ENST00000464454 SBSNQ6UWP8 590 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 LRRN1Q6UXK5 716 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 SLC35E3Q7Z769 313 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 COMMD7Q86VX2 200 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 OR13C8Q8NGS7 320 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 OR5J2Q8NH18 312 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 CCL13Q99616 98 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 SPZ1Q9BXG8 430 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 PRO2289Q9P1D8 64 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 TAAR3PQ9P1P4 343 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 V9GYY5 206 aaPredicted RBP1.59□□□□□ -2.15
CLK1-208ENST00000464454 NCKAP5O14513 1909 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 KIF15Q9NS87 1388 aa1.59□□□□□ -2.16
CLK1-208ENST00000464454 PLB1Q6P1J6 1458 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 SORL1Q92673 2214 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 C9JCJ5 164 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 H0Y980 276 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 J3QQQ9 107 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 BPGMP07738 259 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 SERPINA6P08185 405 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 RPL12P30050 165 aaKnown RBP1.58□□□□□ -2.16
CLK1-208ENST00000464454 HAAOP46952 286 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 TAS2R20P59543 309 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 RPL26P61254 145 aaKnown RBP1.58□□□□□ -2.16
CLK1-208ENST00000464454 ERHP84090 104 aaKnown RBP1.58□□□□□ -2.16
CLK1-208ENST00000464454 PRDX4Q13162 271 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 SAPCD1Q5SSQ6 148 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 C8orf74Q6P047 294 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 C5orf46Q6UWT4 87 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 RASSF6Q6ZTQ3 369 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 OR8J2Q8NGG1 315 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 RAB2BQ8WUD1 216 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 TMA16Q96EY4 203 aaKnown RBP1.58□□□□□ -2.16
CLK1-208ENST00000464454 OR51I2Q9H344 312 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 FKBP14Q9NWM8 211 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 RPL26L1Q9UNX3 145 aaKnown RBP1.58□□□□□ -2.16
CLK1-208ENST00000464454 HHLA3Q9XRX5 114 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 DOCK10Q96BY6 2186 aa1.58□□□□□ -2.16
CLK1-208ENST00000464454 WDR90Q96KV7 1748 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 PXDNLA1KZ92 1463 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 DENND4BO75064 1496 aaPredicted RBP1.57□□□□□ -2.16
CLK1-208ENST00000464454 MDC1Q14676 2089 aaKnown RBP1.57□□□□□ -2.16
CLK1-208ENST00000464454 TRAV41A0A0B4J266 112 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 A0A1B0GW54 56 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 DISC1C4P0D8 188 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 COX7A2LO14548 114 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 PEBP1P30086 187 aaKnown RBP1.57□□□□□ -2.16
CLK1-208ENST00000464454 SLCO1A2P46721 670 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 RAP1GDS1P52306 607 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 AP2S1P53680 142 aaPredicted RBP1.57□□□□□ -2.16
CLK1-208ENST00000464454 MYL6P60660 151 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 AP1S1P61966 158 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 RSU1Q15404 277 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 BATFQ16520 125 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 Q6ZTI0 123 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 GPHB5Q86YW7 130 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 PACRGLQ8N7B6 248 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 OR2T27Q8NH04 317 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 ZNF675Q8TD23 568 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 GNPNAT1Q96EK6 184 aaPredicted RBP1.57□□□□□ -2.16
CLK1-208ENST00000464454 HRASLSQ9HDD0 168 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 C3orf18Q9UK00 162 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 ANAPC10Q9UM13 185 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 ABCC12Q96J65 1359 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 NUP160Q12769 1436 aa1.57□□□□□ -2.16
CLK1-208ENST00000464454 SIPA1L1O43166 1804 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 C21orf140B9A014 251 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 KRT75O95678 551 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 REG1AP05451 166 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 S100A5P33763 92 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 FXYD7P58549 80 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 MAGOHP61326 146 aaKnown RBP1.56□□□□□ -2.16
CLK1-208ENST00000464454 TPRXLQ17RH7 258 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 LRRC75BQ2VPJ9 315 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 KRTAP13-4Q3LI77 160 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 C1orf195Q5TG92 126 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 HIST2H3AQ71DI3 136 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 TESCQ96BS2 214 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 TIMM21Q9BVV7 248 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 TTTY13Q9BZ97 58 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 UBAP1Q9NZ09 502 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 ZNF532Q9HCE3 1301 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 C9orf84Q5VXU9 1444 aa1.56□□□□□ -2.16
CLK1-208ENST00000464454 IGHV1-69-2A0A0G2JMI3 117 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 ZNF860A6NHJ4 632 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 RFPL4AA6NLU0 287 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 RFPL4AL1F8VTS6 287 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 NEFHP12036 1026 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 UCHL3P15374 230 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 RPS12P25398 132 aaKnown RBP1.55□□□□□ -2.16
CLK1-208ENST00000464454 CA5AP35218 305 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 RELAQ04206 551 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 FADDQ13158 208 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 MIAQ16674 131 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 CDKL4Q5MAI5 379 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 CLVS2Q5SYC1 327 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 C1orf194Q5T5A4 169 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 UMODL1-AS1Q8N2C9 162 aa1.55□□□□□ -2.16
CLK1-208ENST00000464454 ANKRD7Q92527 254 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms