RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 IGKV1D-8A0A087WSZ0 117 aa19.01■□□□□ 0.63
CTDSPL-206ENST00000443503 HYPMO75409 117 aa19.01■□□□□ 0.63
CTDSPL-206ENST00000443503 C11orf42Q8N5U0 333 aa19.01■□□□□ 0.63
CTDSPL-206ENST00000443503 OR1L6Q8NGR2 347 aa19.01■□□□□ 0.63
CTDSPL-206ENST00000443503 TNFRSF19Q9NS68 423 aa19.01■□□□□ 0.63
CTDSPL-206ENST00000443503 ZFHX2Q9C0A1 2572 aaPredicted RBP19■□□□□ 0.63
CTDSPL-206ENST00000443503 IGKV3-7A0A075B6H7 116 aa19■□□□□ 0.63
CTDSPL-206ENST00000443503 MMD2Q8IY49 270 aa19■□□□□ 0.63
CTDSPL-206ENST00000443503 TMEM171Q8WVE6 324 aa19■□□□□ 0.63
CTDSPL-206ENST00000443503 IGHV2OR16-5A0A0B4J2B6 119 aa19■□□□□ 0.63
CTDSPL-206ENST00000443503 RNF115Q9Y4L5 304 aa19■□□□□ 0.63
CTDSPL-206ENST00000443503 IFNL4K9M1U5 179 aa19■□□□□ 0.63
CTDSPL-206ENST00000443503 RND2P52198 227 aa19■□□□□ 0.63
CTDSPL-206ENST00000443503 OR13A1Q8NGR1 328 aa19■□□□□ 0.63
CTDSPL-206ENST00000443503 FOXD3Q9UJU5 478 aaPredicted RBP19■□□□□ 0.63
CTDSPL-206ENST00000443503 ZNF98A6NK75 572 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 KBTBD11O94819 623 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 SMIM17P0DL12 118 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 SLC35B1P78383 322 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 HLA-DRB5Q30154 266 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 NAGKQ9UJ70 344 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 SMIM6P0DI80 62 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 TMPRSS3P57727 454 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 ACSF3Q4G176 576 aaPredicted RBP18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 GRAMD2BQ96HH9 432 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 ZNF729A6NN14 1252 aaPredicted RBP18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 NDUFA2O43678 99 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 TRGC2P03986 189 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 HNRNPA3P51991 378 aaKnown RBP18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 COX19Q49B96 90 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 MIOXQ9UGB7 285 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 PITPNC1Q9UKF7 332 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 CLDN16Q9Y5I7 305 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 TRAV34A0A0B4J273 112 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 CD59P13987 128 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 PLAURQ03405 335 aa18.99■□□□□ 0.63
CTDSPL-206ENST00000443503 CRYGSP22914 178 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 OR5AU1Q8NGC0 362 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 METTL1Q9UBP6 276 aaKnown RBP18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 IGKV1D-13A0A0B4J2D9 117 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 IGKV1-13P0DP09 117 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 SELENOTP62341 195 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 SMUG1Q53HV7 270 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 GGNQ86UU5 652 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 C1orf162Q8NEQ5 155 aaPredicted RBP18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 OR2D3Q8NGH3 330 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 RNF126Q9BV68 326 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 SEMA5BQ9P283 1151 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 GBF1Q92538 1859 aa18.98■□□□□ 0.63
CTDSPL-206ENST00000443503 ANAPC1Q9H1A4 1944 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 IGHV3-48P01763 117 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 FAM3BP58499 235 aaPredicted RBP18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 C17orf98A8MV24 154 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 H0YIZ8 118 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 ARF6P62330 175 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 HIST3H3Q16695 136 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 PQLC2Q6ZP29 291 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 PTBP3O95758 552 aaKnown RBP18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 PLPPR1Q8TBJ4 325 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 NABP1Q96AH0 204 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 VOPP1Q96AW1 172 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 IGKV1-12A0A0C4DH73 117 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 IGKV1D-12P01611 117 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 CEACAM1P13688 526 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 ZNF788Q6ZQV5 615 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 C5orf17Q8NAS9 161 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 ABHD17AQ96GS6 310 aa18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 QTRT1Q9BXR0 403 aaKnown RBP18.97■□□□□ 0.63
CTDSPL-206ENST00000443503 FAM216BQ8N7L0 139 aa18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 C5orf63A6NC05 138 aa18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 MFAP2P55001 183 aa18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 OR9G1Q8NH87 305 aa18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 SCN8AQ9UQD0 1980 aa18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 CD40P25942 277 aa18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 HIGD1AQ9Y241 93 aa18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 HIST1H1EP10412 219 aaKnown RBP18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 TMEM183BQ1AE95 376 aa18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 STARD4Q96DR4 205 aa18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 RCC1LQ96I51 464 aaKnown RBP18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 YTHDF2Q9Y5A9 579 aaKnown RBP18.96■□□□□ 0.63
CTDSPL-206ENST00000443503 HIST1H1BP16401 226 aaKnown RBP18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 WDR25Q64LD2 544 aaPredicted RBP18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 P2RX4Q99571 388 aa18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 TXNDC17Q9BRA2 123 aa18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 TMSB15BA0A087X1C1 80 aa18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 PPIAL4CA0A0B4J2A2 164 aa18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 GFRA3O60609 400 aa18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 PPIAL4GP0DN37 164 aa18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 FHL1Q13642 323 aa18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 LINC01560Q8TB33 94 aa18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 DLL1O00548 723 aa18.95■□□□□ 0.62
CTDSPL-206ENST00000443503 OR4C13Q8NGP0 309 aa18.94■□□□□ 0.62
CTDSPL-206ENST00000443503 A8MXK9 166 aa18.94■□□□□ 0.62
CTDSPL-206ENST00000443503 IQCF6A8MYZ5 107 aa18.94■□□□□ 0.62
CTDSPL-206ENST00000443503 ORM1P02763 201 aa18.94■□□□□ 0.62
CTDSPL-206ENST00000443503 OR5AL1P0C617 328 aa18.94■□□□□ 0.62
CTDSPL-206ENST00000443503 MUC15Q8N387 334 aa18.94■□□□□ 0.62
CTDSPL-206ENST00000443503 IGHV1-69-2A0A0G2JMI3 117 aa18.94■□□□□ 0.62
CTDSPL-206ENST00000443503 ARL14EPLP0DKL9 152 aa18.94■□□□□ 0.62
CTDSPL-206ENST00000443503 NHLH1Q02575 133 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms