RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ZNF718Q3SXZ3 478 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 IGHG3P01860 377 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 GPR12P47775 334 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 EDDM3AQ14507 147 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 GUSBP1Q15486 140 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 LTC4SQ16873 150 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 PLA2G2CQ5R387 149 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 DIRC2Q96SL1 478 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 PCGF1Q9BSM1 259 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 ELOVL1Q9BW60 279 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 CECR9P0C854 216 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 CLEC12BQ2HXU8 276 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 ZNF664Q8N3J9 261 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 C1orf162Q8NEQ5 155 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 OR6C3Q9NZP0 311 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 WDR83OSQ9Y284 106 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 PRR14LQ5THK1 2151 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 C15orf65H3BRN8 121 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 EREGO14944 169 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 FCGR3BO75015 233 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 OR9G9P0C7N8 305 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 DUTP33316 252 aaKnown RBP13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 JOSD1Q15040 202 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 VWA1Q6PCB0 445 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 OR1P1Q8NH06 330 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 LOXL4Q96JB6 756 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 LOC400499M0QZD8 3231 aa13.73□□□□□ -0.21
SEMA3B-207ENST00000441915 SOX15O60248 233 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 HPRT1P00492 218 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 KIR2DL2P43627 348 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 RPP30P78346 268 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 OR2T10Q8NGZ9 312 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 LRRC29Q8WV35 223 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 DCTN5Q9BTE1 182 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 GNG12Q9UBI6 72 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 A0A1W2PPV4 95 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 PDE6DO43924 150 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 PRDX2P32119 198 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 PAX5Q02548 391 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 PRAMEF5Q5TYX0 476 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 CD177Q8N6Q3 437 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 Q8N7P7 452 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 RAB1CQ92928 201 aa13.72□□□□□ -0.21
SEMA3B-207ENST00000441915 TRAV38-1A0A0B4J264 116 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 XKRY2A2RUG3 117 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 SRP14P37108 136 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 MZT1Q08AG7 82 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 KCNIP4Q6PIL6 250 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 OR5T1Q8NG75 326 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 OR4A16Q8NH70 328 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 PLPPR2Q96GM1 343 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 ACY3Q96HD9 319 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 DVL1O14640 695 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 MPDU1O75352 247 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 NPPCP23582 126 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 EDDM3BP56851 147 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 COA6Q5JTJ3 125 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 DEFB123Q8N688 67 aa13.71□□□□□ -0.21
SEMA3B-207ENST00000441915 FAM90A9PA6NNJ1 464 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 GGCTO75223 188 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 GZMBP10144 247 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 TMEM249Q2WGJ8 235 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 AARDQ4LEZ3 155 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 GCSAMLQ5JQS6 135 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 CST9LP1Q5W188 147 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 C9orf106Q8NAJ2 232 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 RNASEH2CQ8TDP1 164 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 TMEM170AQ8WVE7 144 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 JPT1Q9UK76 154 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 PROP1O75360 226 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 AMBPP02760 352 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 MORN2Q502X0 79 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 MBNL2Q5VZF2 373 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 HEYLQ9NQ87 328 aaPredicted RBP13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 PTPRBP23467 1997 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 CCL11P51671 97 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 UBE2G2P60604 165 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 CISD2Q8N5K1 135 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 FUT9Q9Y231 359 aa13.7□□□□□ -0.22
SEMA3B-207ENST00000441915 HEATR1Q9H583 2144 aaKnown RBP13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 WISP2O76076 250 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 CRYAAP02489 173 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 ZNF25P17030 456 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 ERVK-16P61578 105 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 P2RY6Q15077 328 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 ACTL10Q5JWF8 245 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 LINC01551Q86U37 167 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 OR2Z1Q8NG97 314 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 PPP1R35Q8TAP8 253 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 FAM234AQ9H0X4 552 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 KCNIP2Q9NS61 270 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 HCFC1P51610 2035 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 PCNX2A6NKB5 2137 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 IGHV2OR16-5A0A0B4J2B6 119 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 M0R1X1 148 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 TMPRSS2O15393 492 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 IGLV1-44P01699 117 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 TYMSP04818 313 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 CHRNA7P36544 502 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 ATP5G3P48201 142 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms