RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 SMUG1Q53HV7 270 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 PPP1R32Q7Z5V6 425 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 TIMP4Q99727 224 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 CCL19Q99731 98 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 NABP2Q9BQ15 211 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 TLNRD1Q9H1K6 362 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 CHODLQ9H9P2 273 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 SHANK3Q9BYB0 1731 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 MCM3APO60318 1980 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 FBLL1A6NHQ2 334 aaKnown RBP10.92□□□□□ -0.66
LDB3-205ENST00000429277 ZG16O60844 167 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 DANCRP0C864 163 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 C5orf66Q9H5L9 145 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 ARL14EPLP0DKL9 152 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 ZNF25P17030 456 aaPredicted RBP10.92□□□□□ -0.66
LDB3-205ENST00000429277 DCTN5Q9BTE1 182 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 KCNE5Q9UJ90 142 aa10.92□□□□□ -0.66
LDB3-205ENST00000429277 FAM159AQ6UWV7 190 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 CLDND2Q8NHS1 167 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 SRSF12Q8WXF0 261 aaKnown RBP10.91□□□□□ -0.66
LDB3-205ENST00000429277 MRPS18CQ9Y3D5 142 aaKnown RBP10.91□□□□□ -0.66
LDB3-205ENST00000429277 RECKO95980 971 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 THY1P04216 161 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 MEF2CQ06413 473 aaPredicted RBP10.91□□□□□ -0.66
LDB3-205ENST00000429277 DRAM1Q8N682 238 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 PIN1P1O15428 100 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 RND3P61587 244 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 SLC25A34Q6PIV7 304 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 CENPVQ7Z7K6 275 aaPredicted RBP10.91□□□□□ -0.66
LDB3-205ENST00000429277 ATXN7O15265 892 aaPredicted RBP10.91□□□□□ -0.66
LDB3-205ENST00000429277 DLX6P56179 175 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 KIAA1217Q5T5P2 1943 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 C1QTNF12Q5T7M4 302 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 PNKDQ8N490 385 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 MEGF10Q96KG7 1140 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 A0A0B4J293 547 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 PLAUP00749 431 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 GLIPR1P48060 266 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 PGLYRP4Q96LB8 373 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 ZNF703Q9H7S9 590 aaPredicted RBP10.91□□□□□ -0.66
LDB3-205ENST00000429277 DPM3Q9P2X0 92 aa10.91□□□□□ -0.66
LDB3-205ENST00000429277 GAGE10A6NGK3 116 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 SCGB1A1P11684 91 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 C2orf68Q2NKX9 166 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 SPATA45Q537H7 98 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 OR10S1Q8NGN2 331 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 GEMIN7Q9H840 131 aaKnown RBP10.9□□□□□ -0.66
LDB3-205ENST00000429277 ZNF818PQ6ZRF7 136 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 TM2D1Q9BX74 207 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 TPRP12270 2363 aaKnown RBP10.9□□□□□ -0.66
LDB3-205ENST00000429277 DNAJC13O75165 2243 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 TRGC2P03986 189 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 GPX4P36969 197 aaPredicted RBP10.9□□□□□ -0.66
LDB3-205ENST00000429277 POC1AQ8NBT0 407 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 TMEM106BQ9NUM4 274 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 PLXNB2O15031 1838 aa10.9□□□□□ -0.66
LDB3-205ENST00000429277 PF4P02776 101 aa10.9□□□□□ -0.67
LDB3-205ENST00000429277 GPR61Q9BZJ8 451 aa10.9□□□□□ -0.67
LDB3-205ENST00000429277 SOX21Q9Y651 276 aaPredicted RBP10.9□□□□□ -0.67
LDB3-205ENST00000429277 A0A1B0GW15 77 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 GCHFRP30047 84 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 FOXL2P58012 376 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 APCDD1LQ8NCL9 501 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 SCN3AQ9NY46 2000 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 LNP1A1A4G5 178 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 ZNF98A6NK75 572 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 CYP2G1PQ6ZSU1 146 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 PUSL1Q8N0Z8 303 aaKnown RBP10.89□□□□□ -0.67
LDB3-205ENST00000429277 CRYBB3P26998 211 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 IFITM3Q01628 133 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 NPIPB3Q92617 1050 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 EAF1Q96JC9 268 aaPredicted RBP10.89□□□□□ -0.67
LDB3-205ENST00000429277 GDF15Q99988 308 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 LOC101059948A0A1B0GTJ6 334 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 IGLV3-19P01714 112 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 CD8AP01732 235 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 FAM209BQ5JX69 171 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 ACP7Q6ZNF0 438 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 ALKBH7Q9BT30 221 aaPredicted RBP10.89□□□□□ -0.67
LDB3-205ENST00000429277 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 KIF13BQ9NQT8 1826 aa10.89□□□□□ -0.67
LDB3-205ENST00000429277 LOC107984156A0A0G2JMH3 177 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 IL4P05112 153 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 HBBP68871 147 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 PRSS53Q2L4Q9 553 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 DNLZQ5SXM8 178 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 Q6AWC8 147 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 ARL17AQ8IVW1 177 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 IGHV3OR16-12A0A075B7B8 117 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 LMX1BO60663 402 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 TGIF1Q15583 401 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 ZNF56Q15929 161 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 C4orf51C9J302 202 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 NPFFO15130 113 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 CEACAM1P13688 526 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 MEIG1Q5JSS6 88 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 OR4A47Q6IF82 309 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 UBR3Q6ZT12 1888 aa10.88□□□□□ -0.67
LDB3-205ENST00000429277 TAS2R60P59551 318 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms