RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 KCNIP1Q9NZI2 227 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 RNF7Q9UBF6 113 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 INSIG2Q9Y5U4 225 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 SESN1Q9Y6P5 492 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 DNAH3Q8TD57 4116 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 A0A1B0GU03 582 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 I3L521 148 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 LGALS8O00214 317 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 ZNF737O75373 536 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 M6PRP20645 277 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 GZMHP20718 246 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 ZP3P21754 424 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 PRDX2P32119 198 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 OR3A1P47881 315 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 S100A10P60903 97 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 HTD2P86397 168 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 COL10A1Q03692 680 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 GNMTQ14749 295 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 KLF17Q5JT82 389 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-202ENST00000428704 C5orf24Q7Z6I8 188 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 CCDC28AQ8IWP9 274 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 OR52M1Q8NGK5 317 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 GALMQ96C23 342 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 EAF1Q96JC9 268 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-202ENST00000428704 SNX22Q96L94 193 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 SSBP3Q9BWW4 388 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-202ENST00000428704 MS4A7Q9GZW8 240 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-202ENST00000428704 AURKAIP1Q9NWT8 199 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-202ENST00000428704 MIOXQ9UGB7 285 aa7.05□□□□□ -1.28
HDAC1-202ENST00000428704 IGHV2-70DA0A0C4DH43 119 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 A6NLC8 198 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 C22orf46C9J442 243 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 HSD17B6O14756 317 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 SEC11BP0C7V7 166 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 IRF2P14316 349 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 PVALBP20472 110 aaPredicted RBP7.04□□□□□ -1.28
HDAC1-202ENST00000428704 CEACAM6P40199 344 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 NKX2-1P43699 371 aaPredicted RBP7.04□□□□□ -1.28
HDAC1-202ENST00000428704 SULT1A2P50226 295 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 GNB2P62879 340 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 PAX8Q06710 450 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 EIF4EBP1Q13541 118 aaPredicted RBP7.04□□□□□ -1.28
HDAC1-202ENST00000428704 TEX36Q5VZQ5 186 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 WDR25Q64LD2 544 aaPredicted RBP7.04□□□□□ -1.28
HDAC1-202ENST00000428704 DUX4L9Q6RFH8 374 aaPredicted RBP7.04□□□□□ -1.28
HDAC1-202ENST00000428704 BOLLQ8N9W6 283 aaKnown RBP7.04□□□□□ -1.28
HDAC1-202ENST00000428704 OR8B3Q8NGG8 313 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 LRRC29Q8WV35 223 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 PCNPQ8WW12 178 aaKnown RBP7.04□□□□□ -1.28
HDAC1-202ENST00000428704 MARC2Q969Z3 335 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 COQ2Q96H96 371 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 SMIM8Q96KF7 97 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 OR8B2Q96RD0 313 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 COA4Q9NYJ1 87 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 OR1A1Q9P1Q5 309 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 GAB2Q9UQC2 676 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 LSM5Q9Y4Y9 91 aaKnown RBP7.04□□□□□ -1.28
HDAC1-202ENST00000428704 RNF114Q9Y508 228 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 PCLOQ9Y6V0 5065 aa7.04□□□□□ -1.28
HDAC1-202ENST00000428704 IGHV3OR15-7A0A075B7D8 119 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 BORCS7-ASMTA0A0B4J1R7 106 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 C12orf77C9JDV5 145 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 C15orf65H3BRN8 121 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 TEX46H3BTG2 121 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 ITGB1BP1O14713 200 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 MGST3O14880 152 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 HSPA12AO43301 675 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 NDUFA7O95182 113 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 CGB3P0DN86 165 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 CGB7P0DN87 165 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 PSG2P11465 335 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 BLOC1S1P78537 153 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 RPL7L1Q6DKI1 246 aaKnown RBP7.03□□□□□ -1.28
HDAC1-202ENST00000428704 FGFRL1Q8N441 504 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 OR2C3Q8N628 320 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 DRAM1Q8N682 238 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 CD177Q8N6Q3 437 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 ZNF645Q8N7E2 425 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 LYPD6BQ8NI32 183 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 GINS3Q9BRX5 216 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 SLC25A31Q9H0C2 315 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 TNFRSF19Q9NS68 423 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 LIN7CQ9NUP9 197 aaKnown RBP7.03□□□□□ -1.28
HDAC1-202ENST00000428704 C1RLQ9NZP8 487 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 CLN8Q9UBY8 286 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 FBXL17Q9UF56 701 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 OR14J1Q9UGF5 321 aa7.03□□□□□ -1.28
HDAC1-202ENST00000428704 RCL1Q9Y2P8 373 aaKnown RBP7.03□□□□□ -1.28
HDAC1-202ENST00000428704 IGKV1D-17A0A075B6S4 117 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 TRAV38-1A0A0B4J264 116 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 FAM90A26D6RGX4 464 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 K7N7A8 449 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 HOXA3O43365 443 aaPredicted RBP7.02□□□□□ -1.29
HDAC1-202ENST00000428704 ADAM20O43506 726 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 YPEL1O60688 119 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 ATG12O94817 140 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 SCGB1D2O95969 90 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 HBZP02008 142 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 GYPAP02724 150 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 OPN1MWP04001 364 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms