RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SIGLEC5O15389 551 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.44□□□□□ -0.42
PTPN13-203ENST00000427191 CIARTQ8N365 385 aaPredicted RBP12.44□□□□□ -0.42
PTPN13-203ENST00000427191 KIR3DL3Q8N743 410 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 DNASE2BQ8WZ79 361 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 OR2H2O95918 312 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 PF4V1P10720 104 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 PUSL1Q8N0Z8 303 aaKnown RBP12.44□□□□□ -0.42
PTPN13-203ENST00000427191 DUX5Q96PT3 197 aa12.44□□□□□ -0.42
PTPN13-203ENST00000427191 MRPS18BQ9Y676 258 aaKnown RBP12.44□□□□□ -0.42
PTPN13-203ENST00000427191 SPTBN1Q01082 2364 aaKnown RBP12.44□□□□□ -0.42
PTPN13-203ENST00000427191 ODAMA1E959 279 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 PHLDA1Q8WV24 401 aaPredicted RBP12.43□□□□□ -0.42
PTPN13-203ENST00000427191 NPDC1Q9NQX5 325 aaPredicted RBP12.43□□□□□ -0.42
PTPN13-203ENST00000427191 CLDN16Q9Y5I7 305 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 PLAURQ03405 335 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 UNQ5815/PRO19632Q6UWF5 114 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 FGFRL1Q8N441 504 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 MYEOVQ96EZ4 313 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 IGHV3OR15-7A0A075B7D8 119 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 NPIPB11E5RHQ5 1161 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 TSPAN2O60636 221 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 FTH1P19P0C7X4 201 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 CXorf66Q5JRM2 361 aaPredicted RBP12.43□□□□□ -0.42
PTPN13-203ENST00000427191 DCAF10Q5QP82 559 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 OR9G1Q8NH87 305 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 TMEM170BQ5T4T1 132 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 DPH3Q96FX2 82 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 FOXJ2Q9P0K8 574 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 SELENOHQ8IZQ5 122 aaKnown RBP12.43□□□□□ -0.42
PTPN13-203ENST00000427191 A0A1B0GUT8 65 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 PGLYRP1O75594 196 aaPredicted RBP12.43□□□□□ -0.42
PTPN13-203ENST00000427191 HLA-DQB1P01920 261 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 FAM214BQ7L5A3 538 aa12.43□□□□□ -0.42
PTPN13-203ENST00000427191 A0A0G2JLM5 398 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 PTP4A3O75365 173 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 EIF3GO75821 320 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTPN13-203ENST00000427191 SSTR5P35346 364 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 GBF1Q92538 1859 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 NACAE9PAV3 2078 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 RRHO14718 337 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 RUNX1Q01196 453 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 OR4X2Q8NGF9 303 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 FREM3P0C091 2139 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 VSIG10L2P0DP72 767 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 MIC13Q5XKP0 118 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 AMER3Q8N944 861 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 ZNF418Q8TF45 676 aaPredicted RBP12.42□□□□□ -0.42
PTPN13-203ENST00000427191 CLEC7AQ9BXN2 247 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 DUSP15Q9H1R2 295 aaPredicted RBP12.42□□□□□ -0.42
PTPN13-203ENST00000427191 LOC390937A0A1W2PQ73 354 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 RND2P52198 227 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 C5orf30Q96GV9 206 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 ZNF488Q96MN9 340 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 CALYQ9NYX4 217 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 PRR7Q8TB68 274 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 CD8AP01732 235 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 CENPWQ5EE01 88 aa12.42□□□□□ -0.42
PTPN13-203ENST00000427191 BEX4Q9NWD9 120 aaPredicted RBP12.42□□□□□ -0.42
PTPN13-203ENST00000427191 APELAP0DMC3 54 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 GPR146Q96CH1 333 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 TTTY12Q9BZ98 90 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 TMEM160Q9NX00 188 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 PLXNA1Q9UIW2 1896 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 TM4SF5O14894 197 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 C2orf68Q2NKX9 166 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 LIMS2Q7Z4I7 341 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 IGHV5-10-1A0A0J9YXX1 117 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 CCL21O00585 134 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 ACSF3Q4G176 576 aaPredicted RBP12.41□□□□□ -0.42
PTPN13-203ENST00000427191 SSBP4Q9BWG4 385 aaPredicted RBP12.41□□□□□ -0.42
PTPN13-203ENST00000427191 TRBV7-9A0A0J9YWB2 115 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 KLK2P20151 261 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 RND3P61587 244 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 NHLRC3Q5JS37 347 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 FAM219BQ5XKK7 198 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 ZNF721Q8TF20 911 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 SDF2L1Q9HCN8 221 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 CEP290O15078 2479 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 CBLN4Q9NTU7 201 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 REG1BP48304 166 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 WNT2BQ93097 391 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 CCL3P10147 92 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 C9orf40Q8IXQ3 194 aa12.41□□□□□ -0.42
PTPN13-203ENST00000427191 FHITP49789 147 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 CFAP161Q6P656 301 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 CHODLQ9H9P2 273 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 FOXD3Q9UJU5 478 aaPredicted RBP12.4□□□□□ -0.42
PTPN13-203ENST00000427191 PARP14Q460N5 1801 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 ORMDL3Q8N138 153 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 ARL6IP6Q8N6S5 226 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.4□□□□□ -0.42
PTPN13-203ENST00000427191 DRD3P35462 400 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 MGAT2Q10469 447 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 IL36BQ9NZH7 164 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 IGHMP01871 453 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 COX6B1P14854 86 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 SLC25A2Q9BXI2 301 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 ADAMTSL1Q8N6G6 1762 aa12.4□□□□□ -0.42
PTPN13-203ENST00000427191 SYNGR3O43761 229 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms