RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 OR5AC1P0C628 307 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 CISD3P0C7P0 127 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 C8orf88P0DMB2 117 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR5H8P0DN80 308 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF17P17021 662 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 FGF7P21781 194 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 NFYBP25208 207 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 DDTP30046 118 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 RPL12P30050 165 aaKnown RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 GABRA3P34903 492 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 KIR2DS4P43632 304 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 LPAR6P43657 344 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 RND2P52198 227 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 CCL23P55773 120 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 CLDN17P56750 224 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 RAB38P57729 211 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF121P58317 390 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 RAP1BP61224 184 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 IGLV3-21P80748 117 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 MRPS11P82912 194 aaKnown RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 RPL19P84098 196 aaKnown RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 PRDX4Q13162 271 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 KIAA0141Q14154 515 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF266Q14584 549 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 UBE2V2Q15819 145 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 POU2AF1Q16633 256 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 DEFB115Q30KQ5 88 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 SCGB2B2Q4G0G5 96 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 C14orf28Q4W4Y0 310 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 PDZD11Q5EBL8 140 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 GLYATL3Q5SZD4 288 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 Q6ZT83 130 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC25A48Q6ZT89 311 aaKnown RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 Q71RC1 249 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 TRAPPC6BQ86SZ2 158 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 GKN2Q86XP6 184 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 TGIF2LYQ8IUE0 185 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 LGI3Q8N145 548 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 ABHD12Q8N2K0 398 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 POM121L12Q8N7R1 296 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR5L1Q8NGL2 311 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR5D14Q8NGL3 314 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR8S1Q8NH09 359 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR4K15Q8NH41 348 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 NPRL2Q8WTW4 380 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 MUCL1Q96DR8 90 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 RBMXL1Q96E39 390 aaKnown RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 GNPNAT1Q96EK6 184 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC25A44Q96H78 314 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 ACY3Q96HD9 319 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 C14orf144Q96I85 54 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 SEC22AQ96IW7 307 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 C2orf48Q96LS8 159 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 SCRT1Q9BWW7 348 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 SUCNR1Q9BXA5 334 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 TBL1XR1Q9BZK7 514 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 NXF5Q9H1B4 397 aaKnown RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 LINC00597Q9H2U6 94 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 GNB4Q9HAV0 340 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 DHCR7Q9UBM7 475 aaKnown RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 PRODH2Q9UF12 536 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF230Q9UIE0 474 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF391Q9UJN7 358 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 DKKL1Q9UK85 242 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 VPREB3Q9UKI3 123 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 NTNG1Q9Y2I2 539 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 HDGFL3Q9Y3E1 203 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 R4GMQ9 66 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 DENND4CQ5VZ89 1909 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 ADAMTS9Q9P2N4 1935 aa2.89□□□□□ -1.95
HMGB3P23-201ENST00000414981 OBSL1O75147 1896 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 TRBV24-1A0A075B6N3 115 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 TRAV36DV7A0A075B6V5 113 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 DUXBA0A1W2PPF3 345 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 A0A1W2PQD3 144 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 FAM231BA6NCW3 169 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 A8MWP6 167 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 EEF1E1-BLOC1S5C9J1V9 151 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 PPP5D1E7EU14 171 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 XKRYO14609 159 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF354AO60765 605 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 ALOX12BO75342 701 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 CYB5R3P00387 301 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 KLK3P07288 261 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 CTSDP07339 412 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR8U9P0C7N5 309 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 METTL15P1P0C7V9 234 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 PTHLHP12272 177 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H1DP16402 221 aaKnown RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 GZMHP20718 246 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 HRH1P35367 487 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 RBMXP38159 391 aaKnown RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 LEPP41159 167 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 AKR1C2P52895 323 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 RPL27P61353 136 aaKnown RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 RPL32P62910 135 aaKnown RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC35A1P78382 337 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 SRPXP78539 464 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 AKR1C1Q04828 323 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 456.9 ms