RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 KIR2DL4Q99706 377 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 SMOC1Q9H4F8 434 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 PLAUP00749 431 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 APELAP0DMC3 54 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 FGF5P12034 268 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 HTN1P15515 57 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 SNAI3Q3KNW1 292 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 ASPHD2Q6ICH7 369 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 TMEM186Q96B77 213 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 KCNS1Q96KK3 526 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 F11RQ9Y624 299 aaKnown RBP11.09□□□□□ -0.63
RNF43-201ENST00000407977 A0A1W2PQM1 296 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 SLC25A17O43808 307 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 SHISA5Q8N114 240 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 DYNLRB2Q8TF09 96 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 DLEC1Q9Y238 1755 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 TM4SF20Q53R12 229 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 DNM1P46Q6ZS02 220 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 C1orf210Q8IVY1 113 aa11.09□□□□□ -0.63
RNF43-201ENST00000407977 ADAMTSL3P82987 1691 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 HCP5Q6MZN7 132 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 DEFB123Q8N688 67 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 CLDND2Q8NHS1 167 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 CLDN16Q9Y5I7 305 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 TRIP11Q15643 1979 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 IGKV3-7A0A075B6H7 116 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 A0A1B0GTI1 187 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 A0A1W2PQF6 199 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 PRSS8Q16651 343 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 FCGR2BP31994 310 aaPredicted RBP11.08□□□□□ -0.64
RNF43-201ENST00000407977 TMEM170AQ8WVE7 144 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 WNT5BQ9H1J7 359 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 UBE2CO00762 179 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 LRTM2Q8N967 370 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 FAM131CQ96AQ9 280 aa11.08□□□□□ -0.64
RNF43-201ENST00000407977 ATRAIDQ6UW56 229 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 FAM169BQ8N8A8 192 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 ZNF441Q8N8Z8 693 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 LAMTOR2Q9Y2Q5 125 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 CDK5RAP2Q96SN8 1893 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 TMEM229AB2RXF0 380 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 IL6RP08887 468 aaPredicted RBP11.07□□□□□ -0.64
RNF43-201ENST00000407977 DLX6P56179 175 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 TBR1Q16650 682 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 IGHV1-45A0A0A0MS14 117 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 AHRRA9YTQ3 701 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 IGHV4-34P06331 123 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 TRAV14DV4A0A0A6YYC5 116 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 MBNL2Q5VZF2 373 aaKnown RBP11.07□□□□□ -0.64
RNF43-201ENST00000407977 GPR82Q96P67 336 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 TGIF1Q15583 401 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 ABHD12Q8N2K0 398 aa11.07□□□□□ -0.64
RNF43-201ENST00000407977 PRR33A8MZF0 331 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 F8VVB4 439 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 F8VWA3 439 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 OR9G1Q8NH87 305 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 ALKBH7Q9BT30 221 aaPredicted RBP11.06□□□□□ -0.64
RNF43-201ENST00000407977 FGF16O43320 207 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 ZNF324BQ6AW86 544 aaPredicted RBP11.06□□□□□ -0.64
RNF43-201ENST00000407977 ITLN1Q8WWA0 313 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 TMEM54Q969K7 222 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 C5orf30Q96GV9 206 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 MRPL16Q9NX20 251 aaKnown RBP11.06□□□□□ -0.64
RNF43-201ENST00000407977 A0A1B0GWB2 263 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 DNAL4O96015 105 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 C10orf126Q8N4M7 172 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 FBLN5Q9UBX5 448 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 LY75O60449 1722 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 UBE2L6O14933 153 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 TSPOP30536 169 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 GOLT1AQ6ZVE7 132 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.06□□□□□ -0.64
RNF43-201ENST00000407977 DEFB124Q8NES8 71 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 C14orf144Q96I85 54 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 MOB4Q9Y3A3 225 aa11.06□□□□□ -0.64
RNF43-201ENST00000407977 USP54Q70EL1 1684 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 TRBV20OR9-2A0A075B6H5 130 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 A0A1B0GUT8 65 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 SNRPCP09234 159 aaKnown RBP11.05□□□□□ -0.64
RNF43-201ENST00000407977 GPR6P46095 362 aaPredicted RBP11.05□□□□□ -0.64
RNF43-201ENST00000407977 CCL8P80075 99 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 C1orf185Q5T7R7 199 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 WFDC3Q8IUB2 231 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 RTBDNQ9BSG5 229 aaPredicted RBP11.05□□□□□ -0.64
RNF43-201ENST00000407977 SSBP3Q9BWW4 388 aaPredicted RBP11.05□□□□□ -0.64
RNF43-201ENST00000407977 WNT10AQ9GZT5 417 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 GFRA1P56159 465 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 FOXC1Q12948 553 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 PRELID3AQ96N28 172 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 OPN3Q9H1Y3 402 aaPredicted RBP11.05□□□□□ -0.64
RNF43-201ENST00000407977 CHODLQ9H9P2 273 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 JKAMPQ9P055 326 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 NPIPB3Q92617 1050 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 AKIRIN1Q9H9L7 192 aaPredicted RBP11.05□□□□□ -0.64
RNF43-201ENST00000407977 SCN4AP35499 1836 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 IZUMO1RA6ND01 250 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 RP1P56715 2156 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 DNAJC13O75165 2243 aa11.05□□□□□ -0.64
RNF43-201ENST00000407977 TSPAN13O95857 204 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms