RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 PRSS3P2Q8NHM4 247 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 TMEM18Q96B42 140 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 OR2A7Q96R45 310 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 FBXL15Q9H469 300 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 WDR61Q9GZS3 305 aaKnown RBP12.31□□□□□ -0.44
PSME4-201ENST00000389993 TOLLIPQ9H0E2 274 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 PARD6AQ9NPB6 346 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 GOLT1BQ9Y3E0 138 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 DENND4CQ5VZ89 1909 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 ARL14EPLP0DKL9 152 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 APOBEC3AP31941 199 aaPredicted RBP12.3□□□□□ -0.44
PSME4-201ENST00000389993 LINC00205P59089 165 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 SIGIRRQ6IA17 410 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 HIGD1AQ9Y241 93 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 NPIPB7O75200 414 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 SFTPCP11686 197 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 TFF3Q07654 80 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 MANBALQ9NQG1 85 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 OR5R1Q8NH85 324 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 RSPO3Q9BXY4 272 aaPredicted RBP12.3□□□□□ -0.44
PSME4-201ENST00000389993 ZNF407Q9C0G0 2248 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 FAM74A7A6NL05 159 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 CXorf1O96002 111 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 FAM74A3Q4VXF1 159 aa12.3□□□□□ -0.44
PSME4-201ENST00000389993 C17orf82Q86X59 251 aaPredicted RBP12.3□□□□□ -0.44
PSME4-201ENST00000389993 MUC21A0A0G2JKD1 596 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 MUC21A0A140T8X8 626 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 SH2D7A6NKC9 451 aaPredicted RBP12.29□□□□□ -0.44
PSME4-201ENST00000389993 P01737 135 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 IGFBP3P17936 291 aaPredicted RBP12.29□□□□□ -0.44
PSME4-201ENST00000389993 BTCP35070 178 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 MUC21Q5SSG8 566 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 GCSAMQ8N6F7 178 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 OR5AU1Q8NGC0 362 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 NPVFQ9HCQ7 196 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 CACFD1Q9UGQ2 172 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 RPRMLQ8N4K4 120 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 ZBTB34Q8NCN2 500 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 PIMREGQ9BSJ6 248 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 ALX4Q9H161 411 aaPredicted RBP12.29□□□□□ -0.44
PSME4-201ENST00000389993 C1RLQ9NZP8 487 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 IGSF23A1L1A6 192 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 GLRXP35754 106 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 HEATR5AQ86XA9 2040 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 IGKV1-27A0A075B6S5 117 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 CD55P08174 381 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 HOXD4P09016 255 aaPredicted RBP12.29□□□□□ -0.44
PSME4-201ENST00000389993 TBR1Q16650 682 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 TAF15Q92804 592 aaKnown RBP eCLIP12.29□□□□□ -0.44
PSME4-201ENST00000389993 CHRDL1Q9BU40 450 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 TMEM167BQ9NRX6 74 aa12.29□□□□□ -0.44
PSME4-201ENST00000389993 E9PLN8 166 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 WDFY1Q8IWB7 410 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 OR2T10Q8NGZ9 312 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 DYNLRB2Q8TF09 96 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 IGKV1-12A0A0C4DH73 117 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 IGKV1D-12P01611 117 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 COX5BP10606 129 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 POM121Q96HA1 1249 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 RRHO14718 337 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 G0S2P27469 103 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 KHDC3LQ587J8 217 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 DOLPP1Q86YN1 238 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 STPG2Q8N412 459 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 NPIPB3Q92617 1050 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 SLC25A28Q96A46 364 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 LURAP1Q96LR2 239 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 IGKV1D-33P01593 117 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 IGKV1-33P01594 117 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 CD74P04233 296 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 FAM106CPP0CH98 169 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 PQLC2LA1A4F0 135 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 POC1AQ8NBT0 407 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 NEUROG1Q92886 237 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 LYRM2Q9NU23 88 aaPredicted RBP12.28□□□□□ -0.44
PSME4-201ENST00000389993 METRNQ9UJH8 293 aa12.28□□□□□ -0.44
PSME4-201ENST00000389993 CTXND1A0A1B0GTU2 59 aa12.27□□□□□ -0.44
PSME4-201ENST00000389993 HSD17B13Q7Z5P4 300 aaPredicted RBP12.27□□□□□ -0.44
PSME4-201ENST00000389993 MRPL20Q9BYC9 149 aaKnown RBP12.27□□□□□ -0.44
PSME4-201ENST00000389993 DIDO1Q9BTC0 2240 aaKnown RBP12.27□□□□□ -0.44
PSME4-201ENST00000389993 OR5AL1P0C617 328 aa12.27□□□□□ -0.44
PSME4-201ENST00000389993 SPCS3P61009 180 aa12.27□□□□□ -0.44
PSME4-201ENST00000389993 TCF19Q9Y242 345 aa12.27□□□□□ -0.44
PSME4-201ENST00000389993 AUP1Q9Y679 476 aa12.27□□□□□ -0.44
PSME4-201ENST00000389993 NBASA2RRP1 2371 aa12.27□□□□□ -0.44
PSME4-201ENST00000389993 A0A1W2PRX2 142 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 CA2P00918 260 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 SEC11CQ9BY50 192 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 YLPM1P49750 1951 aaKnown RBP12.27□□□□□ -0.45
PSME4-201ENST00000389993 SNURFLB1AK76 121 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 BMPERQ8N8U9 685 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 GRAMD2BQ96HH9 432 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 LINC00527Q9UJ94 153 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 TGIF2-C20orf24A0A0A6YYL0 155 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.27□□□□□ -0.45
PSME4-201ENST00000389993 PGPA6NDG6 321 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 HYPMO75409 117 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 ZNF345Q14585 488 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 ZNF343Q6P1L6 599 aa12.27□□□□□ -0.45
PSME4-201ENST00000389993 PQLC2Q6ZP29 291 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms