RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 IGHV3-35A0A0C4DH35 117 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 ERVH48-1M5A8F1 160 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 SUMO1P63165 101 aaKnown RBP15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 LILRB1Q8NHL6 650 aaPredicted RBP15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 SH3BGRL3Q9H299 93 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 LINC00862A6NCI5 91 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 MIC13Q5XKP0 118 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 NRIP2Q9BQI9 281 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 FAM103A1Q9BTL3 118 aaKnown RBP15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 PLSCR4Q9NRQ2 329 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 MIOXQ9UGB7 285 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 CEACAM18A8MTB9 384 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 LIPFP07098 398 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 RANP62826 216 aaKnown RBP15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 ZNF880Q6PDB4 577 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 FAM89BQ8N5H3 189 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 EAF1Q96JC9 268 aaPredicted RBP15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 VAX2Q9UIW0 290 aa15.14■□□□□ 0.01
PTPDC1-202ENST00000375360 CTXND1A0A1B0GTU2 59 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 C7orf77A4D0Y5 90 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 Q8WTZ3 238 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 LURAP1Q96LR2 239 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 AQP10Q96PS8 301 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 PXMP4Q9Y6I8 212 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 Q6ZS92 163 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 LYRM2Q9NU23 88 aaPredicted RBP15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 HGFACQ04756 655 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 DPF1Q92782 380 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 CAMPP49913 170 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 SULT1A2P50226 295 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 C10orf113Q5VZT2 155 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 MMD2Q8IY49 270 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 TCTEX1D1Q8N7M0 179 aa15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 TAF15Q92804 592 aaKnown RBP eCLIP15.13■□□□□ 0.01
PTPDC1-202ENST00000375360 TSTD3H0UI37 97 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 J3KRW8 73 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 KBTBD11O94819 623 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 GALR1P47211 349 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 RND2P52198 227 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 LCN2P80188 198 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 RPRMLQ8N4K4 120 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 RNASE6Q93091 150 aaKnown RBP15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 CLEC7AQ9BXN2 247 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 TMEM167BQ9NRX6 74 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 ZNF581Q9P0T4 197 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 FBLN5Q9UBX5 448 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 E9PLN8 166 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 CDK2AP1O14519 115 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 LY6EQ16553 131 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 VKORC1Q9BQB6 163 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 PCDH15Q96QU1 1955 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 OR4C13Q8NGP0 309 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 CHRDL1Q9BU40 450 aa15.12■□□□□ 0.01
PTPDC1-202ENST00000375360 HIST3H3Q16695 136 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 POM121Q96HA1 1249 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 TIMP3P35625 211 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 PRR30Q53SZ7 412 aaPredicted RBP15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 LINC00869P0C866 280 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 SERF2P84101 59 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 NAT8BQ9UHF3 227 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 XKRY2A2RUG3 117 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 FABP4P15090 132 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 C1QTNF12Q5T7M4 302 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 DHRS11Q6UWP2 260 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 ZNF788Q6ZQV5 615 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 CYB561D1Q8N8Q1 229 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 GALNT14Q96FL9 552 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 PERPQ96FX8 193 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 QTRT1Q9BXR0 403 aaKnown RBP15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 TUBD1Q9UJT1 453 aa15.11■□□□□ 0.01
PTPDC1-202ENST00000375360 AARDQ4LEZ3 155 aa15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 H1FOOQ8IZA3 346 aaPredicted RBP15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 H3BQ15 152 aa15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 RD3LP0DJH9 198 aa15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 UCP1P25874 307 aa15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 DLK1P80370 383 aa15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 PEAR1Q5VY43 1037 aaPredicted RBP15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 FAM210BQ96KR6 192 aa15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 WFIKKN1Q96NZ8 548 aa15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 KBTBD11-OT1A0A1B0GTJ5 212 aa15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 DHRS7BQ6IAN0 325 aaPredicted RBP15.1■□□□□ 0.01
PTPDC1-202ENST00000375360 NAGKQ9UJ70 344 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 DOCK11Q5JSL3 2073 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 GATCO43716 136 aaKnown RBP15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 ZNF735P0CB33 412 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 FAM106CPP0CH98 169 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 GUCA2BQ16661 112 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 TMEM186Q96B77 213 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 DNASE2O00115 360 aaPredicted RBP15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 PSPNO60542 156 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 MMP9P14780 707 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 MS4A10Q96PG2 267 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 P2RX4Q99571 388 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 RSRP1Q9BUV0 290 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 TRAPPC1Q9Y5R8 145 aa15.09■□□□□ 0.01
PTPDC1-202ENST00000375360 ARFGEF3Q5TH69 2177 aa15.08■□□□□ 0.01
PTPDC1-202ENST00000375360 CD8AP01732 235 aa15.08■□□□□ 0.01
PTPDC1-202ENST00000375360 PF4V1P10720 104 aa15.08■□□□□ 0.01
PTPDC1-202ENST00000375360 NUP210Q8TEM1 1887 aaPredicted RBP15.08■□□□□ 0
PTPDC1-202ENST00000375360 A0A0G2JNJ9 132 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms