RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FAM90A12PA8MX19 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A5PA8MXJ8 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A23PA8MXZ1 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A15PP0C7V4 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A13PP0C7W8 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A14PP0C7W9 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A24PP0C7X0 464 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 LRRC75BQ2VPJ9 315 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 HCP5Q6MZN7 132 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 INO80CQ6PI98 192 aaPredicted RBP5.55□□□□□ -1.52
SMC1A-202ENST00000375340 ZBTB34Q8NCN2 500 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 ITLN1Q8WWA0 313 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 EAF1Q96JC9 268 aaPredicted RBP5.55□□□□□ -1.52
SMC1A-202ENST00000375340 LTBRP36941 435 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 UQCRFS1P47985 274 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 SLC25A53Q5H9E4 307 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 SSBP3Q9BWW4 388 aaPredicted RBP5.55□□□□□ -1.52
SMC1A-202ENST00000375340 BET1LQ9NYM9 111 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 RNF24Q9Y225 148 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 IGKV1-12A0A0C4DH73 117 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 PPIHO43447 177 aaKnown RBP5.55□□□□□ -1.52
SMC1A-202ENST00000375340 IGKV1D-12P01611 117 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 PTGDSP41222 190 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 IBA57Q5T440 356 aaKnown RBP5.55□□□□□ -1.52
SMC1A-202ENST00000375340 DOLPP1Q86YN1 238 aa5.55□□□□□ -1.52
SMC1A-202ENST00000375340 SPAARA0A1B0GVQ0 90 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 BMPR1BO00238 502 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 SOD3P08294 240 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 CRYBB3P26998 211 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 NUBP1P53384 320 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 MUC15Q8N387 334 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 MAP1LC3CQ9BXW4 147 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HEATR1Q9H583 2144 aaKnown RBP5.54□□□□□ -1.52
SMC1A-202ENST00000375340 SDK2Q58EX2 2172 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST1H2BKO60814 126 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 NPIPB7O75200 414 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST1H2BJP06899 126 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST1H2BOP23527 126 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST1H2BBP33778 126 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST1H2BDP58876 126 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST1H2BCP62807 126 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST2H2BEQ16778 126 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.54□□□□□ -1.52
SMC1A-202ENST00000375340 LHFPL4Q7Z7J7 247 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 C1QL4Q86Z23 238 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST1H2BHQ93079 126 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST1H2BNQ99877 126 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST1H2BMQ99879 126 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 C1QTNF5Q9BXJ0 243 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 ZNF703Q9H7S9 590 aaPredicted RBP5.54□□□□□ -1.52
SMC1A-202ENST00000375340 UFC1Q9Y3C8 167 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 C1QTNF9BB2RNN3 333 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 CA11O75493 328 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 ACP1P24666 158 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 SRIP30626 198 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 FAM201AQ5SY85 155 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 ZNF525Q8N782 197 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 NDFIP1Q9BT67 221 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 C21orf140B9A014 251 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 S100A7P31151 101 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 BRS3P32247 399 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 STARD6P59095 220 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 TAS2R60P59551 318 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 SPCS3P61009 180 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 TMEM97Q5BJF2 176 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 GCSAMLQ5JQS6 135 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 FAM166AQ6J272 317 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 SRCAPQ6ZRS2 3230 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 ADMP35318 185 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HIST3H3Q16695 136 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 NABP1Q96AH0 204 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 PKIBQ9C010 78 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 TMEM56-RWDD3S4R434 201 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 PGPEP1LA6NFU8 196 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 CEACAM18A8MTB9 384 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 CCL8P80075 99 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 PRB3Q04118 309 aaPredicted RBP5.54□□□□□ -1.52
SMC1A-202ENST00000375340 FAM162BQ5T6X4 162 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 ERASQ7Z444 233 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 GBGT1Q8N5D6 347 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 OR8G5Q8NG78 346 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 ABCA7Q8IZY2 2146 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 A0A1W2PN81 502 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 C5orf52A6NGY3 159 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 M0QZK8 103 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 NKX2-8O15522 239 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 GGCTO75223 188 aaKnown RBP5.54□□□□□ -1.52
SMC1A-202ENST00000375340 CD81P60033 236 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 DEPPQ9NTK1 212 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 K7N7A8 449 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 RRHO14718 337 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 CA2P00918 260 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 IL6RP08887 468 aaPredicted RBP5.54□□□□□ -1.52
SMC1A-202ENST00000375340 HOXA5P20719 270 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 MST1LQ2TV78 715 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 ZNF324BQ6AW86 544 aaPredicted RBP5.54□□□□□ -1.52
SMC1A-202ENST00000375340 WNT10AQ9GZT5 417 aa5.54□□□□□ -1.52
SMC1A-202ENST00000375340 TRAV24A0A0B4J272 114 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 SIAH2O43255 324 aa5.53□□□□□ -1.52
SMC1A-202ENST00000375340 CENPWQ5EE01 88 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms