RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 FBXO17Q96EF6 278 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 OR2H2O95918 312 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 NXT2Q9NPJ8 142 aaKnown RBP8.74□□□□□ -1.01
PTCH1-204ENST00000375290 SCGB1A1P11684 91 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 TIMM23BQ5SRD1 257 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 GNRHR2Q96P88 292 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 RPRMQ9NS64 109 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 NYNRINQ9P2P1 1898 aaKnown RBP8.74□□□□□ -1.01
PTCH1-204ENST00000375290 H3BVH4 76 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 ORMDL3Q8N138 153 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 HIST3H2BBQ8N257 126 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 CCL11P51671 97 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 SOX8P57073 446 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 HSD52Q0P140 79 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 CENPWQ5EE01 88 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 GCHFRP30047 84 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 PRDX2P32119 198 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 BHLHA15Q7RTS1 189 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-204ENST00000375290 BIVMQ86UB2 503 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 MRPL13Q9BYD1 178 aaKnown RBP8.73□□□□□ -1.01
PTCH1-204ENST00000375290 TMEM140Q9NV12 185 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 TRAV14DV4A0A0A6YYC5 116 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 LGALS3P17931 250 aaKnown RBP8.73□□□□□ -1.01
PTCH1-204ENST00000375290 PTCRAQ6ISU1 281 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-204ENST00000375290 SIGMAR1Q99720 223 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 RTBDNQ9BSG5 229 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-204ENST00000375290 RHOGP84095 191 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 NABP2Q9BQ15 211 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 SPATA46Q5T0L3 261 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 Q6ZS49 121 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 C18orf12Q96KH6 178 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 TDRD6O60522 2096 aaKnown RBP8.73□□□□□ -1.01
PTCH1-204ENST00000375290 LY6G6FQ5SQ64 297 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 ZNF818PQ6ZRF7 136 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 DNM1P46Q6ZS02 220 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 GLRX5Q86SX6 157 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 FNDC10F2Z333 226 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 IGKV1D-16P01601 117 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 NUBP1P53384 320 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 SLC25A53Q5H9E4 307 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 ZPLD1Q8TCW7 415 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 HEATR5BQ9P2D3 2071 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 C21orf62-AS1Q17RA5 79 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 C1orf162Q8NEQ5 155 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-204ENST00000375290 DEFB127Q9H1M4 99 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 SFTPCP11686 197 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 COL10A1Q03692 680 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 FBLN7Q53RD9 439 aa8.73□□□□□ -1.01
PTCH1-204ENST00000375290 CXorf66Q5JRM2 361 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-204ENST00000375290 GNB2P62879 340 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 UNC119Q13432 240 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 C10orf126Q8N4M7 172 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 REG4Q9BYZ8 158 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 IGHV1-69-2A0A0G2JMI3 117 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 DNAL4O96015 105 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 TSPOP30536 169 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 RPL27AP46776 148 aaKnown RBP8.72□□□□□ -1.01
PTCH1-204ENST00000375290 METTL26Q96S19 204 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 TPRP12270 2363 aaKnown RBP8.72□□□□□ -1.01
PTCH1-204ENST00000375290 DLEU1O43261 78 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 PSG4Q00888 419 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 TNFRSF19Q9NS68 423 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 COL11A2P13942 1736 aaPredicted RBP8.72□□□□□ -1.01
PTCH1-204ENST00000375290 TMPRSS2O15393 492 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 PEBP1P30086 187 aaKnown RBP8.72□□□□□ -1.01
PTCH1-204ENST00000375290 RFESDQ8TAC1 157 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 RNF126Q9BV68 326 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 ZNF576Q9H609 170 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 DEFB108AA8MXU0 73 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 SPRY3O43610 288 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 RFLNBQ8N5W9 214 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 FAM60AQ9NP50 221 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 ASPHD2Q6ICH7 369 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 CLEC1BQ9P126 229 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 SPCS1Q9Y6A9 102 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 LOC107984156A0A0G2JMH3 177 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 SLC25A48Q6ZT89 311 aaKnown RBP8.72□□□□□ -1.01
PTCH1-204ENST00000375290 ARL17AQ8IVW1 177 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 FAM222BQ8WU58 562 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 GREB1Q4ZG55 1949 aa8.72□□□□□ -1.01
PTCH1-204ENST00000375290 MRPL16Q9NX20 251 aaKnown RBP8.72□□□□□ -1.01
PTCH1-204ENST00000375290 CRYBA2P53672 197 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 MGAT2Q10469 447 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 OR10J6PQ8NGY7 276 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 ACTL10Q5JWF8 245 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 FOXD3Q9UJU5 478 aaPredicted RBP8.71□□□□□ -1.01
PTCH1-204ENST00000375290 FAM186AA6NE01 2351 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 SIPA1L1O43166 1804 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 IGKV3-11P04433 115 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 ZNF488Q96MN9 340 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 ZNF257Q9Y2Q1 563 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 CDX4O14627 284 aaPredicted RBP8.71□□□□□ -1.01
PTCH1-204ENST00000375290 ID3Q02535 119 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 ZNF788Q6ZQV5 615 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 DLL3Q9NYJ7 618 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 MBD1Q9UIS9 605 aaPredicted RBP8.71□□□□□ -1.01
PTCH1-204ENST00000375290 TCF19Q9Y242 345 aa8.71□□□□□ -1.01
PTCH1-204ENST00000375290 GPR183P32249 361 aa8.71□□□□□ -1.02
PTCH1-204ENST00000375290 VEGFBP49765 207 aa8.71□□□□□ -1.02
PTCH1-204ENST00000375290 RPL23P62829 140 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms