RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ZDHHC11Q9H8X9 412 aa10.27□□□□□ -0.77
NCDN-202ENST00000373243 WDR54Q9H977 334 aa10.27□□□□□ -0.77
NCDN-202ENST00000373243 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.27□□□□□ -0.77
NCDN-202ENST00000373243 AGFG2O95081 481 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 CRYGSP22914 178 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 GPR12P47775 334 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 COMPP49747 757 aaPredicted RBP10.26□□□□□ -0.77
NCDN-202ENST00000373243 MDP1Q86V88 176 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 SIGLECL1Q8N7X8 197 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 TRIB1Q96RU8 372 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 NAT8Q9UHE5 227 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 C22orf46C9J442 243 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 C11orf94C9JXX5 98 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 KLRC4-KLRK1H3BQV0 150 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 M0R1X1 148 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 SPINT2O43291 252 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 PMCHP20382 165 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 IL15RAQ13261 267 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 SPSB3Q6PJ21 355 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 CLDND2Q8NHS1 167 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 DEPPQ9NTK1 212 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 A0A0G2JRQ6 117 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 UCP1P25874 307 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 MEF2BQ02080 365 aaPredicted RBP10.26□□□□□ -0.77
NCDN-202ENST00000373243 ZNF506Q5JVG8 444 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 DHRS13Q6UX07 377 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 HSPB7Q9UBY9 170 aa10.26□□□□□ -0.77
NCDN-202ENST00000373243 CUL9Q8IWT3 2517 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 OR2H2O95918 312 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 MT-CO3P00414 261 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 THBS3P49746 956 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 RND2P52198 227 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 RAB31Q13636 194 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 HIST3H3Q16695 136 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 TAF15Q92804 592 aaKnown RBP eCLIP10.25□□□□□ -0.77
NCDN-202ENST00000373243 SDF2L1Q9HCN8 221 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 SLC35D1Q9NTN3 355 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 TRAV38-1A0A0B4J264 116 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 PINLYPA6NC86 204 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 LRRC3CA6NJW4 275 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 KIAA1324LA8MWY0 1029 aaPredicted RBP10.25□□□□□ -0.77
NCDN-202ENST00000373243 LILRA1O75019 489 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 PPP1CBP62140 327 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 LHFPL4Q7Z7J7 247 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 MRPL52Q86TS9 123 aaKnown RBP10.25□□□□□ -0.77
NCDN-202ENST00000373243 NIT1Q86X76 327 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 OR2M7Q8NG81 312 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 OR5D13Q8NGL4 314 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 CTDSP1Q9GZU7 261 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 ARRDC1-AS1Q9H2J1 176 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 LOC102723971A0A1B0GUV8 181 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 OR5B21A6NL26 309 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 ZG16O60844 167 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 KLF7O75840 302 aaPredicted RBP10.25□□□□□ -0.77
NCDN-202ENST00000373243 MEOX1P50221 254 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 Q6ZWC4 215 aa10.25□□□□□ -0.77
NCDN-202ENST00000373243 TMEM30CPA0ZSE6 113 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 NTF3P20783 257 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 TCF23Q7RTU1 214 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 GATAD1Q8WUU5 269 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 ZDHHC16Q969W1 377 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 NEIL1Q96FI4 390 aaPredicted RBP10.24□□□□□ -0.77
NCDN-202ENST00000373243 SIGLEC12Q96PQ1 595 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 PARLQ9H300 379 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 CACNA1BQ00975 2339 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 ZNF716A6NP11 495 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 WNT9BO14905 357 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 SLC35B1P78383 322 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 OR4B1Q8NGF8 309 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 SLC25A40Q8TBP6 338 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 MPC1Q9Y5U8 109 aa10.24□□□□□ -0.77
NCDN-202ENST00000373243 IGLV3-32A0A0A0MS00 114 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 J3QT63 122 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 SAP30O75446 220 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 TOX4O94842 621 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 NDUFB4O95168 129 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 HRASP01112 189 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 GYPAP02724 150 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 HOXA4Q00056 320 aaPredicted RBP10.23□□□□□ -0.77
NCDN-202ENST00000373243 ID3Q02535 119 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 LINC01551Q86U37 167 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 DRAM1Q8N682 238 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 ZNF703Q9H7S9 590 aaPredicted RBP10.23□□□□□ -0.77
NCDN-202ENST00000373243 ABCA4P78363 2273 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 IGHV2OR16-5A0A0B4J2B6 119 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 OR7C2O60412 319 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 OTX1P32242 354 aaPredicted RBP10.23□□□□□ -0.77
NCDN-202ENST00000373243 TCL1AP56279 114 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 SMIM21Q3B7S5 101 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 SAMD13Q5VXD3 122 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 FAM90A2PQ658T7 463 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 C20orf204Q6ZNR8 217 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 Q6ZRM9 215 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 PPP1R32Q7Z5V6 425 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 VKORC1L1Q8N0U8 176 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 TMEM251Q8N6I4 163 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 UHRF2Q96PU4 802 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 IMMP2LQ96T52 175 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 TMEM147Q9BVK8 224 aa10.23□□□□□ -0.77
NCDN-202ENST00000373243 CRIM1Q9NZV1 1036 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms