RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TMEM222Q9H0R3 208 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 PPIAL4EA0A075B759 164 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 PPIAL4DF5H284 164 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 PPIAL4FP0DN26 164 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 NRTNQ99748 197 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 PPIAL4AQ9Y536 164 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 NHSL1Q5SYE7 1610 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 TSPOP30536 169 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 RPS20P60866 119 aaKnown RBP10.77□□□□□ -0.69
HCFC1-202ENST00000369984 GPR82Q96P67 336 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 SH3BGRL3Q9H299 93 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 KLHDC2Q9Y2U9 406 aa10.77□□□□□ -0.69
HCFC1-202ENST00000369984 A1L4Q6 167 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 FGF12P61328 243 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 C9orf50Q5SZB4 431 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 BIVMQ86UB2 503 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 IGHV4-39P01824 125 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 NANOS3P60323 173 aaKnown RBP10.76□□□□□ -0.69
HCFC1-202ENST00000369984 ZNF56Q15929 161 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 C1orf174Q8IYL3 243 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 WNT2BQ93097 391 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 LRP5O75197 1615 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 PGPA6NDG6 321 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 COL9A1P20849 921 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 UCNP55089 124 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 SELENOTP62341 195 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 IRF3Q14653 427 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 OR2K2Q8NGT1 345 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 C14orf144Q96I85 54 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 C1QL1O75973 258 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 OR52M1Q8NGK5 317 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 DNASE2BQ8WZ79 361 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 TRBV9A0A0B4J1U6 114 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 LOC285556D6RIA3 1793 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 TRAV8-6A0A0B4J262 113 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 PF4V1P10720 104 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 RPL27AP46776 148 aaKnown RBP10.76□□□□□ -0.69
HCFC1-202ENST00000369984 ISXQ2M1V0 245 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 C9orf40Q8IXQ3 194 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 KIR3DL3Q8N743 410 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 TUBD1Q9UJT1 453 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 TRBV7-9A0A0J9YWB2 115 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 C17orf51A8MQB3 221 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 TPRX1Q8N7U7 411 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 SIGMAR1Q99720 223 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.76□□□□□ -0.691e-6■■■□□ 17.2
HCFC1-202ENST00000369984 SBF2Q86WG5 1849 aa10.76□□□□□ -0.69
HCFC1-202ENST00000369984 FGF5P12034 268 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 CCL8P80075 99 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 FAM74A4Q5TZK3 123 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 SRSF12Q8WXF0 261 aaKnown RBP10.75□□□□□ -0.69
HCFC1-202ENST00000369984 TAF15Q92804 592 aaKnown RBP eCLIP10.75□□□□□ -0.69
HCFC1-202ENST00000369984 DNAJC4Q9NNZ3 241 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 CISD1Q9NZ45 108 aaKnown RBP10.75□□□□□ -0.69
HCFC1-202ENST00000369984 GDF9O60383 454 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 NXPH1P58417 271 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 TXNDC17Q9BRA2 123 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 APOMO95445 188 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 MIC13Q5XKP0 118 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 KCNE5Q9UJ90 142 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 ZDHHC8Q9ULC8 765 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 IGHV3-72A0A0B4J1Y9 119 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 CCL21O00585 134 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 REG1AP05451 166 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 CCL13Q99616 98 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 DMRT1Q9Y5R6 373 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 H3BRM9 83 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 SNAI2O43623 268 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 ALX4Q9H161 411 aaPredicted RBP10.75□□□□□ -0.69
HCFC1-202ENST00000369984 MARF1Q9Y4F3 1742 aaKnown RBP10.75□□□□□ -0.69
HCFC1-202ENST00000369984 TMEM250H0YL14 139 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 GPX1P07203 203 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 MALP21145 153 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 HIST1H1AQ02539 215 aaPredicted RBP10.75□□□□□ -0.69
HCFC1-202ENST00000369984 FAM71F2Q6NXP2 309 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 CLEC2AQ6UVW9 174 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 LIMS2Q7Z4I7 341 aa10.75□□□□□ -0.69
HCFC1-202ENST00000369984 OR2H2O95918 312 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 PRF1P14222 555 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 ZNF784Q8NCA9 323 aaPredicted RBP10.74□□□□□ -0.69
HCFC1-202ENST00000369984 MRAPQ8TCY5 172 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 BRCA1P38398 1863 aaKnown RBP10.74□□□□□ -0.69
HCFC1-202ENST00000369984 GRIFINA4D1Z8 144 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 UCP2P55851 309 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 RFLNBQ8N5W9 214 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 WNT10AQ9GZT5 417 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 EDA2RQ9HAV5 297 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 A0A1W2PPC1 479 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 FCARP24071 287 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 ZPLD1Q8TCW7 415 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 ZNF430Q9H8G1 570 aaPredicted RBP10.74□□□□□ -0.69
HCFC1-202ENST00000369984 TSC2P49815 1807 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 C19orf67A6NJJ6 358 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 TMEM171Q8WVE6 324 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 CNTFRP26992 372 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 SNRPD3P62318 126 aaKnown RBP10.74□□□□□ -0.69
HCFC1-202ENST00000369984 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 ZNF660Q6AZW8 331 aaPredicted RBP10.74□□□□□ -0.69
HCFC1-202ENST00000369984 ZAR1Q86SH2 424 aa10.74□□□□□ -0.69
HCFC1-202ENST00000369984 TNFRSF14Q92956 283 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms