RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 ITLN1Q8WWA0 313 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 RBMXL1Q96E39 390 aaKnown RBP8.91□□□□□ -0.98
TPM3-212ENST00000368533 STRAPQ9Y3F4 350 aaKnown RBP8.91□□□□□ -0.98
TPM3-212ENST00000368533 PSPNO60542 156 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 SLC35E3Q7Z769 313 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 C11orf53Q8IXP5 236 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 PLPPR1Q8TBJ4 325 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 SDSLQ96GA7 329 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 DCTN5Q9BTE1 182 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 LAMP3Q9UQV4 416 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 ZNF462Q96JM2 2506 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 LRP5LA4QPB2 252 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 ZFP92A6NM28 416 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 K7N7A8 449 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 VDAC1P21796 283 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 RPL23AP62750 156 aaKnown RBP8.9□□□□□ -0.98
TPM3-212ENST00000368533 RBX1P62877 108 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 HLA-DRB3P79483 266 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 WDR82Q6UXN9 313 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 TRAPPC2LQ9UL33 140 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 DOCK11Q5JSL3 2073 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 IGKV1-6A0A0C4DH72 117 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 NAPSAO96009 420 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 AESQ08117 197 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 TMEM267Q0VDI3 215 aaPredicted RBP8.9□□□□□ -0.98
TPM3-212ENST00000368533 IL24Q13007 206 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 MAJINQ3KP22 176 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 DUX4L9Q6RFH8 374 aaPredicted RBP8.9□□□□□ -0.98
TPM3-212ENST00000368533 C11orf42Q8N5U0 333 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 OR13D1Q8NGV5 346 aa8.9□□□□□ -0.98
TPM3-212ENST00000368533 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.89□□□□□ -0.99
TPM3-212ENST00000368533 PGLYRP1O75594 196 aaPredicted RBP8.89□□□□□ -0.99
TPM3-212ENST00000368533 CYB5R3P00387 301 aaPredicted RBP8.89□□□□□ -0.99
TPM3-212ENST00000368533 CTXN2P0C2S0 81 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 IAPPP10997 89 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 MPV17LQ2QL34 196 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 PCSK4Q6UW60 755 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 TMEM108Q6UXF1 575 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 RFESDQ8TAC1 157 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 ARV1Q9H2C2 271 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 GNG13Q9P2W3 67 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 USP9XQ93008 2570 aaPredicted RBP8.89□□□□□ -0.99
TPM3-212ENST00000368533 YLPM1P49750 1951 aaKnown RBP8.89□□□□□ -0.99
TPM3-212ENST00000368533 A0A087WWC5 75 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 PRB1P04280 392 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 METTL15P1P0C7V9 234 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 PSG2P11465 335 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 BRS3P32247 399 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 VKORC1Q9BQB6 163 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 CXXC4Q9H2H0 198 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 OR1A1Q9P1Q5 309 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FUT9Q9Y231 359 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A10PA6NDY2 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A18PA6NE21 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A16PA6NEW6 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A20PA6NIJ5 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A8PA6NJQ4 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A7PA6NKC0 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A22PA8MWA6 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A12PA8MX19 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A5PA8MXJ8 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A23PA8MXZ1 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 CLDN34H7C241 214 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 HAND1O96004 215 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 HPRT1P00492 218 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A15PP0C7V4 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A13PP0C7W8 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A14PP0C7W9 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FAM90A24PP0C7X0 464 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 LINC00614P0C842 121 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 CA7P43166 264 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 ADORA2A-AS1P86434 159 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 SAPCD1Q5SSQ6 148 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 CST9LP1Q5W188 147 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 FGFRL1Q8N441 504 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 RNASEH2CQ8TDP1 164 aaKnown RBP8.89□□□□□ -0.99
TPM3-212ENST00000368533 TMEM56Q96MV1 263 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 LYRM2Q9NU23 88 aaPredicted RBP8.89□□□□□ -0.99
TPM3-212ENST00000368533 POLDIP2Q9Y2S7 368 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 TMEM56-RWDD3S4R434 201 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 DSCAMO60469 2012 aa8.89□□□□□ -0.99
TPM3-212ENST00000368533 IGHV3-43A0A0B4J1X8 118 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 TUSC2O75896 110 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 TMEM50AO95807 157 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 IFNA5P01569 189 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 IGHV3-43DP0DP04 118 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 GZMHP20718 246 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 F2RP25116 425 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 GLRXP35754 106 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 ZNRF1Q8ND25 227 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 OR10A7Q8NGE5 316 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 MRPL30Q8TCC3 161 aaKnown RBP8.88□□□□□ -0.99
TPM3-212ENST00000368533 IL22RA2Q969J5 263 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 TBX15Q96SF7 602 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 PRORYQ9H606 182 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 FKBP11Q9NYL4 201 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 PAM16Q9Y3D7 125 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 OR2W1Q9Y3N9 320 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 ARFGEF3Q5TH69 2177 aa8.88□□□□□ -0.99
TPM3-212ENST00000368533 ZG16O60844 167 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms