RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TRAV14DV4A0A0A6YYC5 116 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 MSGN1A6NI15 193 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 CST9LQ9H4G1 147 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 COX11Q9Y6N1 276 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 A0A0G2JMZ2 1700 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 LRRC37A2A6NM11 1700 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 LRRC37AA6NMS7 1700 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 COL24A1Q17RW2 1714 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 TRAV8-2A0A0B4J237 113 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 COX19Q49B96 90 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 PQLC2Q6ZP29 291 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 HOGA1Q86XE5 327 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 DDB2Q92466 427 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 ZNF735P0CB33 412 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 LSM10Q969L4 123 aaKnown RBP9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 MRPS18BQ9Y676 258 aaKnown RBP9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 NUP210Q8TEM1 1887 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 A0A1B0GUS0 222 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 SYT8Q8NBV8 401 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 DAPP1Q9UN19 280 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 HS3ST2Q9Y278 367 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 MUC21A0A0G2JKD1 596 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 MUC21A0A140T8X8 626 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 J3QR06 171 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 CEACAM8P31997 349 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 MUC21Q5SSG8 566 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 HBZP02008 142 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 GZMBP10144 247 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 LOXL3P58215 753 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 CTLA4P16410 223 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 MAS1LP35410 378 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 GFERP55789 205 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 TMEM106BQ9NUM4 274 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 BCL2L10Q9HD36 194 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 TMEM167BQ9NRX6 74 aa9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 PRRC2AP48634 2157 aaKnown RBP9.62□□□□□ -0.87
CDC42BPA-205ENST00000366769 HSPB2A8KAH6 182 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 LGALS3P17931 250 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 HSPB2Q16082 182 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 RTL10Q7L3V2 364 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 TRAV8-1A0A0A6YYK1 113 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 GAGE12BA1L429 117 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 NPIPB6E9PJ23 425 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 MPZL1O95297 269 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 SAMD5Q5TGI4 173 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 CCL4L1Q8NHW4 92 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 ALG1L2C9J202 215 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 TMEM238C9JI98 176 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 NANOS3P60323 173 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 PSG6Q00889 435 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 FLRT3Q9NZU0 649 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 FOXD3Q9UJU5 478 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 DHHO43323 396 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 ADMP35318 185 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 FGF22Q9HCT0 170 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 TMEM38BQ9NVV0 291 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 ST6GALNAC2Q9UJ37 374 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 TRAV5A0A0B4J249 113 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 PGFP49763 221 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 TMEM174Q8WUU8 243 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 A0A0G2JLM5 398 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 GZMMP51124 257 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 A0A1W2PPC1 479 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 C1orf194Q5T5A4 169 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 MRPS16Q9Y3D3 137 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 TMEM177Q53S58 311 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 MVB12AQ96EY5 273 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 C1RLQ9NZP8 487 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 TUBD1Q9UJT1 453 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 INSIG2Q9Y5U4 225 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 STRCP1A6NGW2 1772 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 TRAV17A0A0B4J275 112 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 ADCYAP1P18509 176 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 AZU1P20160 251 aa9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 SSBP3Q9BWW4 388 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-205ENST00000366769 NXPH1P58417 271 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 CLDND2Q8NHS1 167 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 PERPQ96FX8 193 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 ZNF117Q03924 483 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 ACSF3Q4G176 576 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 MRPL52Q86TS9 123 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 C1QL4Q86Z23 238 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 OR10J6PQ8NGY7 276 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 NHP2Q9NX24 153 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 IGHV1-69-2A0A0G2JMI3 117 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 C10orf113Q5VZT2 155 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 PAQR9Q6ZVX9 377 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 TMEM170AQ8WVE7 144 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 SERGEFQ9UGK8 458 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 KCNE1BA0A087WTH5 132 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 MRPS11P82912 194 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 SMIM8Q96KF7 97 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 WBP1LQ9NX94 342 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 SRP19P09132 144 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 DSCR4P56555 118 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 OR10D3Q8NH80 312 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 PSMG3Q9BT73 122 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 CD33P20138 364 aa9.6□□□□□ -0.87
CDC42BPA-205ENST00000366769 SELENOTP62341 195 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms