RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 FAM223AQ8IWN6 122 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 CENPSQ8N2Z9 138 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR2C3Q8N628 320 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 POM121L12Q8N7R1 296 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR1L6Q8NGR2 347 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR11H2Q8NH07 326 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR5B3Q8NH48 314 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 CHAC2Q8WUX2 184 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 TSEN15Q8WW01 171 aaKnown RBP6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 IL1F10Q8WWZ1 152 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 C5orf30Q96GV9 206 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 CIB1Q99828 191 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 RARRES2Q99969 163 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 ALG8Q9BVK2 526 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 JAM3Q9BX67 310 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 C11orf54Q9H0W9 315 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 RAB9BQ9NP90 201 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 C8orf4Q9NR00 106 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 PIPOXQ9P0Z9 390 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR1A1Q9P1Q5 309 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 ENOPH1Q9UHY7 261 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 GMPPBQ9Y5P6 360 aa6.17□□□□□ -1.42
HMGB1P39-201ENST00000366304 IGLV2-18A0A075B6J9 118 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 LINC00854A0A1B0GVQ3 168 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 C16orf90A8MZG2 172 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 RBMY1A1P0DJD3 496 aaKnown RBP6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 RBMY1CP0DJD4 496 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 C8orf88P0DMB2 117 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 CBX5P45973 191 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 RBMY1FQ15415 496 aaKnown RBP6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 TRIM16LQ309B1 348 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 LGALS9BQ3B8N2 356 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 C4orf46Q504U0 113 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 TMEM177Q53S58 311 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 C10orf55Q5SWW7 151 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 XAF1Q6GPH4 301 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 Q6ZTC4 211 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 LHFPL3Q86UP9 236 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 APRG1Q8IVJ8 170 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 CADM3Q8N126 398 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR5AK2Q8NH90 309 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 THRSPQ92748 146 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 GALMQ96C23 342 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 NRBF2Q96F24 287 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 TMEM68Q96MH6 324 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 SULT4A1Q9BR01 284 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 PRRG3Q9BZD7 231 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 RIBC2Q9H4K1 309 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 KCNIP1Q9NZI2 227 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 AASSQ9UDR5 926 aa6.16□□□□□ -1.42
HMGB1P39-201ENST00000366304 TRAV8-7A0A075B6U6 113 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 ZNF320A2RRD8 509 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 FAM25AB3EWG3 89 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 FAM25CB3EWG5 89 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 FAM25GB3EWG6 89 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 CA11O75493 328 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 GPX5O75715 221 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 TUSC2O75896 110 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 FCGR1AP12314 374 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 IGFBP3P17936 291 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 FUT3P21217 361 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 HLA-DMBP28068 263 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 ALDH3B2P48448 385 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 ANKRD55Q3KP44 614 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 KDM4DQ6B0I6 523 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 CLEC19AQ6UXS0 136 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 PDPNQ86YL7 162 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 CLVS1Q8IUQ0 354 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 Q8NAQ8 132 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 OR13C5Q8NGS8 318 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 S100ZQ8WXG8 99 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 MUL1Q969V5 352 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 CPNE2Q96FN4 548 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 SPACA1Q9HBV2 294 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 S100A14Q9HCY8 104 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 TMEM138Q9NPI0 162 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 MBD2Q9UBB5 411 aa6.15□□□□□ -1.42
HMGB1P39-201ENST00000366304 TRAV25A0A0B4J276 109 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 A0A1B0GW64 132 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 TMEM212A6NML5 194 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 ARL3P36405 182 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 LINC00310P59036 64 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 SRSF3P84103 164 aaKnown RBP6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF846Q147U1 533 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 ATP6AP1Q15904 470 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 PRSS8Q16651 343 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF585BQ52M93 769 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 SLC25A30Q5SVS4 291 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZFP1Q6P2D0 407 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF880Q6PDB4 577 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 GLIPR1L1Q6UWM5 242 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 CCDC28AQ8IWP9 274 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 ACBD7Q8N6N7 88 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 NECAP1Q8NC96 275 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 ENKURQ8TC29 256 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 PYDC1Q8WXC3 89 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 SRSF12Q8WXF0 261 aaKnown RBP6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 LGALS12Q96DT0 336 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 PHB2Q99623 299 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 FAAP24Q9BTP7 215 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms