RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 LINC01551Q86U37 167 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 RTN4IP1Q8WWV3 396 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-203ENST00000354674 ACY3Q96HD9 319 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 ZGRF1Q86YA3 2104 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 IGHV2-70DA0A0C4DH43 119 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 IGKV1-9A0A0C4DH69 117 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 ZNF816-ZNF321PA0A0X1KG74 233 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 TRDCB7Z8K6 153 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 AGFG2O95081 481 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 ADMP35318 185 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 FAM27E3Q08E93 113 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 ZNF506Q5JVG8 444 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 FAM19A2Q8N3H0 131 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 GTSF1LQ9H1H1 148 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 FBXL7Q9UJT9 491 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 PIGLQ9Y2B2 252 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 IGHV1-18A0A0C4DH31 117 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 CCNOP22674 350 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 OR3A4PP47883 348 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 CRIP3Q6Q6R5 217 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 OR51I2Q9H344 312 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 BET1LQ9NYM9 111 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 WIPI2Q9Y4P8 454 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 CECR9P0C854 216 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 FAHP16930 419 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 RPS16P62249 146 aaKnown RBP8.48□□□□□ -1.05
SYNE1-203ENST00000354674 PDCD1Q15116 288 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 FBXL19-AS1Q494R0 122 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 ABCA11PQ4W5N1 156 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 OR5AU1Q8NGC0 362 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 NRN1Q9NPD7 142 aa8.48□□□□□ -1.05
SYNE1-203ENST00000354674 LOC102723971A0A1B0GUV8 181 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 GAGE12BA1L429 117 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 IL3RAP26951 378 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 TMEM50BP56557 158 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 MALLQ13021 153 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 IZUMO4Q1ZYL8 232 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 WDR73Q6P4I2 378 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 FBXL14Q8N1E6 418 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 OR4D5Q8NGN0 318 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 RPRMQ9NS64 109 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 C16orf97H3BN30 126 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 CCL21O00585 134 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 PHF1O43189 567 aaPredicted RBP8.47□□□□□ -1.05
SYNE1-203ENST00000354674 PRSS12P56730 875 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 SLC35B1P78383 322 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 ADORA2A-AS1P86434 159 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 TMEM267Q0VDI3 215 aaPredicted RBP8.47□□□□□ -1.05
SYNE1-203ENST00000354674 ACTL10Q5JWF8 245 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 C22orf34Q6ZV56 151 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 SSX8Q7RTT4 187 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 OR2C3Q8N628 320 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 PIGTQ969N2 578 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 FBLL1A6NHQ2 334 aaKnown RBP8.47□□□□□ -1.05
SYNE1-203ENST00000354674 THBS3P49746 956 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 TMEM241Q24JQ0 296 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 TEX43Q6ZNM6 134 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 C1orf174Q8IYL3 243 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 OR51T1Q8NGJ9 327 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 TMEM56Q96MV1 263 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 WASHC3Q9Y3C0 194 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 TMEM56-RWDD3S4R434 201 aa8.47□□□□□ -1.05
SYNE1-203ENST00000354674 YLPM1P49750 1951 aaKnown RBP8.46□□□□□ -1.05
SYNE1-203ENST00000354674 ZNF850A8MQ14 1090 aa8.46□□□□□ -1.05
SYNE1-203ENST00000354674 CRYAAP02489 173 aa8.46□□□□□ -1.05
SYNE1-203ENST00000354674 TMEM225BP0DP42 221 aa8.46□□□□□ -1.05
SYNE1-203ENST00000354674 CEACAM3P40198 252 aa8.46□□□□□ -1.05
SYNE1-203ENST00000354674 TPPP2P59282 170 aa8.46□□□□□ -1.05
SYNE1-203ENST00000354674 RPL23P62829 140 aaKnown RBP8.46□□□□□ -1.05
SYNE1-203ENST00000354674 COA6Q5JTJ3 125 aaKnown RBP8.46□□□□□ -1.05
SYNE1-203ENST00000354674 OR4F5Q8NH21 305 aa8.46□□□□□ -1.05
SYNE1-203ENST00000354674 OR4F4Q96R69 305 aa8.46□□□□□ -1.05
SYNE1-203ENST00000354674 PECRQ9BY49 303 aa8.46□□□□□ -1.05
SYNE1-203ENST00000354674 PLK3Q9H4B4 646 aa8.46□□□□□ -1.05
SYNE1-203ENST00000354674 ZNF586Q9NXT0 402 aa8.46□□□□□ -1.05
SYNE1-203ENST00000354674 NKX2-6A6NCS4 301 aa8.46□□□□□ -1.06
SYNE1-203ENST00000354674 K7ERU9 68 aa8.46□□□□□ -1.06
SYNE1-203ENST00000354674 BCL2P10415 239 aa8.46□□□□□ -1.06
SYNE1-203ENST00000354674 BLVRBP30043 206 aaPredicted RBP8.46□□□□□ -1.06
SYNE1-203ENST00000354674 ACOT6Q3I5F7 207 aaPredicted RBP8.46□□□□□ -1.06
SYNE1-203ENST00000354674 C6orf201Q7Z4U5 140 aa8.46□□□□□ -1.06
SYNE1-203ENST00000354674 NIT1Q86X76 327 aa8.46□□□□□ -1.06
SYNE1-203ENST00000354674 OR52L2PQ8NGH6 319 aa8.46□□□□□ -1.06
SYNE1-203ENST00000354674 SLC35D1Q9NTN3 355 aa8.46□□□□□ -1.06
SYNE1-203ENST00000354674 UQCR10Q9UDW1 63 aa8.46□□□□□ -1.06
SYNE1-203ENST00000354674 ST3GAL6Q9Y274 331 aa8.46□□□□□ -1.06
SYNE1-203ENST00000354674 KIAA1324LA8MWY0 1029 aaPredicted RBP8.45□□□□□ -1.06
SYNE1-203ENST00000354674 IGLC2P0DOY2 106 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 IGLC3P0DOY3 106 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 AMTP48728 403 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 PPP1CBP62140 327 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 MSMO1Q15800 293 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 SMIM21Q3B7S5 101 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 MPV17L2Q567V2 206 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 ZNF841Q6ZN19 808 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 MRPL21Q7Z2W9 205 aaKnown RBP8.45□□□□□ -1.06
SYNE1-203ENST00000354674 SIGLECL1Q8N7X8 197 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 STXBP6Q8NFX7 210 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 PLPPR1Q8TBJ4 325 aa8.45□□□□□ -1.06
SYNE1-203ENST00000354674 SPSB1Q96BD6 273 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms