RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ZNF134P52741 427 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 ZNF66Q6ZN08 573 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 PCGF1Q9BSM1 259 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 OR6C3Q9NZP0 311 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 C11orf94C9JXX5 98 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 MBP02144 154 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 CD1BP29016 333 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 CHRNA7P36544 502 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 ACSF3Q4G176 576 aaPredicted RBP16.24■□□□□ 0.19
COL13A1-201ENST00000354547 BHLHA15Q7RTS1 189 aaPredicted RBP16.24■□□□□ 0.19
COL13A1-201ENST00000354547 OR4X1Q8NH49 305 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 PFDN5Q99471 154 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 TRAV17A0A0B4J275 112 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 RRHO14718 337 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 DEFB108BQ8NET1 73 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 OR13D1Q8NGV5 346 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 STARD4Q96DR4 205 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 OR5B12Q96R08 314 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 OR2V2Q96R30 315 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 DCHS1Q96JQ0 3298 aa16.24■□□□□ 0.19
COL13A1-201ENST00000354547 IFNL4K9M1U5 179 aa16.23■□□□□ 0.19
COL13A1-201ENST00000354547 SLC31A2O15432 143 aa16.23■□□□□ 0.19
COL13A1-201ENST00000354547 LY86O95711 162 aa16.23■□□□□ 0.19
COL13A1-201ENST00000354547 MORN2Q502X0 79 aa16.23■□□□□ 0.19
COL13A1-201ENST00000354547 CENPVQ7Z7K6 275 aaPredicted RBP16.23■□□□□ 0.19
COL13A1-201ENST00000354547 RPRMLQ8N4K4 120 aa16.23■□□□□ 0.19
COL13A1-201ENST00000354547 Q8TCH9 128 aa16.23■□□□□ 0.19
COL13A1-201ENST00000354547 PGPEP1LA6NFU8 196 aa16.23■□□□□ 0.19
COL13A1-201ENST00000354547 C17orf112F2Z3M2 114 aa16.23■□□□□ 0.19
COL13A1-201ENST00000354547 GYPAP02724 150 aa16.23■□□□□ 0.19
COL13A1-201ENST00000354547 ZNF71Q9NQZ8 489 aaPredicted RBP16.23■□□□□ 0.19
COL13A1-201ENST00000354547 PCNX1Q96RV3 2341 aa16.23■□□□□ 0.19
COL13A1-201ENST00000354547 TRBV24-1A0A075B6N3 115 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 A0A1W2PPV4 95 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 AQP7O14520 342 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 TNFSF13O75888 250 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 ATP5G3P48201 142 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 DERL1Q9BUN8 251 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 HINT2Q9BX68 163 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 CTDSP1Q9GZU7 261 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 DKK4Q9UBT3 224 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 ADH4P08319 380 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 FTH1P19P0C7X4 201 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 HNF1AP20823 631 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 NPPCP23582 126 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 GCSAMQ8N6F7 178 aa16.22■□□□□ 0.19
COL13A1-201ENST00000354547 YLPM1P49750 1951 aaKnown RBP16.22■□□□□ 0.19
COL13A1-201ENST00000354547 ACOT6Q3I5F7 207 aaPredicted RBP16.21■□□□□ 0.19
COL13A1-201ENST00000354547 DUX4L9Q6RFH8 374 aaPredicted RBP16.21■□□□□ 0.19
COL13A1-201ENST00000354547 SSMEM1Q8WWF3 244 aa16.21■□□□□ 0.19
COL13A1-201ENST00000354547 TMEM37Q8WXS4 190 aa16.21■□□□□ 0.19
COL13A1-201ENST00000354547 S100PBPQ96BU1 408 aa16.21■□□□□ 0.19
COL13A1-201ENST00000354547 NEIL1Q96FI4 390 aaPredicted RBP16.21■□□□□ 0.19
COL13A1-201ENST00000354547 MRPL37Q9BZE1 423 aaKnown RBP16.21■□□□□ 0.19
COL13A1-201ENST00000354547 PLSCR4Q9NRQ2 329 aa16.21■□□□□ 0.19
COL13A1-201ENST00000354547 PFN1P07737 140 aaKnown RBP16.21■□□□□ 0.19
COL13A1-201ENST00000354547 FAM3BP58499 235 aaPredicted RBP16.21■□□□□ 0.19
COL13A1-201ENST00000354547 C1orf229Q6ZS94 237 aaPredicted RBP16.21■□□□□ 0.19
COL13A1-201ENST00000354547 MEGF10Q96KG7 1140 aa16.21■□□□□ 0.19
COL13A1-201ENST00000354547 DMXL2Q8TDJ6 3036 aa16.21■□□□□ 0.19
COL13A1-201ENST00000354547 TNCP24821 2201 aa16.21■□□□□ 0.18
COL13A1-201ENST00000354547 PPP5D1E7EU14 171 aa16.21■□□□□ 0.18
COL13A1-201ENST00000354547 TMEM250H0YL14 139 aa16.21■□□□□ 0.18
COL13A1-201ENST00000354547 MIC13Q5XKP0 118 aa16.21■□□□□ 0.18
COL13A1-201ENST00000354547 MANBALQ9NQG1 85 aa16.21■□□□□ 0.18
COL13A1-201ENST00000354547 TET2Q6N021 2002 aaPredicted RBP16.2■□□□□ 0.18
COL13A1-201ENST00000354547 PIEZO2Q9H5I5 2752 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 ERVK-16P61578 105 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 GNB2P62879 340 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 PACRGQ96M98 296 aaPredicted RBP16.2■□□□□ 0.18
COL13A1-201ENST00000354547 NDUFB4O95168 129 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 IGLV1-44P01699 117 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 MYOD1P15172 320 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 HTD2P86397 168 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 P2RY6Q15077 328 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 PRSS8Q16651 343 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 S1PR3Q99500 378 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 PRO1933Q9H354 126 aa16.2■□□□□ 0.18
COL13A1-201ENST00000354547 HPRT1P00492 218 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 GAMTQ14353 236 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 PDLIM3Q53GG5 364 aaPredicted RBP16.19■□□□□ 0.18
COL13A1-201ENST00000354547 MBNL2Q5VZF2 373 aaKnown RBP16.19■□□□□ 0.18
COL13A1-201ENST00000354547 C1orf162Q8NEQ5 155 aaPredicted RBP16.19■□□□□ 0.18
COL13A1-201ENST00000354547 SRRM5B3KS81 715 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 CD82P27701 267 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 SEM1Q6ZVN7 128 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 ITLN1Q8WWA0 313 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 RHOVQ96L33 236 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 MS4A5Q9H3V2 200 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 DMRT1Q9Y5R6 373 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 ARFGEF3Q5TH69 2177 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 DSCAMO60469 2012 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 ELOA3CA0A087WX78 387 aaPredicted RBP16.19■□□□□ 0.18
COL13A1-201ENST00000354547 Q8N7P7 452 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 HIST1H2BLQ99880 126 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 TMEM140Q9NV12 185 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 WDR83OSQ9Y284 106 aa16.19■□□□□ 0.18
COL13A1-201ENST00000354547 PTPRBP23467 1997 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 ADGRG4Q8IZF6 3080 aa16.18■□□□□ 0.18
COL13A1-201ENST00000354547 A0A0U1RQK1 487 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms