RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PNKDQ8N490 385 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 ZNF729A6NN14 1252 aaPredicted RBP10.99□□□□□ -0.65
VSTM4-202ENST00000332853 J3QW42 95 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 HYPMO75409 117 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 ORM1P02763 201 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 ZNF735P0CB33 412 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 RND2P52198 227 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 CCDC144NLQ6NUI1 221 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 OR2D3Q8NGH3 330 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 RAB24Q969Q5 203 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 KCNMB2Q9Y691 235 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 PI4KAP42356 2102 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 H3BTX0 84 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 HSPB1P04792 205 aaKnown RBP10.99□□□□□ -0.65
VSTM4-202ENST00000332853 MEOX2P50222 304 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 RNF222A6NCQ9 220 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 SNURFLB1AK76 121 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 F5H697 171 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 IQCJQ1A5X6 159 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 SMIM8Q96KF7 97 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 IL19Q9UHD0 177 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 PTBP3O95758 552 aaKnown RBP10.98□□□□□ -0.65
VSTM4-202ENST00000332853 CRYGSP22914 178 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 FAM3BP58499 235 aaPredicted RBP10.98□□□□□ -0.65
VSTM4-202ENST00000332853 TCTEX1D1Q8N7M0 179 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 IGKV1-12A0A0C4DH73 117 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 IGKV1D-12P01611 117 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 FHL1Q13642 323 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 BMPERQ8N8U9 685 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 OR5AU1Q8NGC0 362 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 TMEM106BQ9NUM4 274 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 PHF3Q92576 2039 aaKnown RBP10.98□□□□□ -0.65
VSTM4-202ENST00000332853 ZNF253O75346 499 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 PGA5P0DJD9 388 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 HTN1P15515 57 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 MEF2BQ02080 365 aaPredicted RBP10.98□□□□□ -0.65
VSTM4-202ENST00000332853 WDR25Q64LD2 544 aaPredicted RBP10.98□□□□□ -0.65
VSTM4-202ENST00000332853 WDR73Q6P4I2 378 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 C5orf17Q8NAS9 161 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 C1orf162Q8NEQ5 155 aaPredicted RBP10.98□□□□□ -0.65
VSTM4-202ENST00000332853 RAXQ9Y2V3 346 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 TPRP12270 2363 aaKnown RBP10.98□□□□□ -0.65
VSTM4-202ENST00000332853 IGKV1-27A0A075B6S5 117 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 TRAV34A0A0B4J273 112 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 FAM90A26D6RGX4 464 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 HIST1H1BP16401 226 aaKnown RBP10.98□□□□□ -0.65
VSTM4-202ENST00000332853 APOBEC3AP31941 199 aaPredicted RBP10.98□□□□□ -0.65
VSTM4-202ENST00000332853 PLAURQ03405 335 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 CLEC2AQ6UVW9 174 aa10.98□□□□□ -0.65
VSTM4-202ENST00000332853 AMTP48728 403 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 SGK494Q96LW2 274 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 TGIF2-C20orf24A0A0A6YYL0 155 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 HLA-DRB5Q30154 266 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 LY6G6FQ5SQ64 297 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 C5orf24Q7Z6I8 188 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 OR5R1Q8NH85 324 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 SGMS2Q8NHU3 365 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 ZCCHC14Q8WYQ9 949 aaKnown RBP10.97□□□□□ -0.65
VSTM4-202ENST00000332853 PNRC2Q9NPJ4 139 aaKnown RBP10.97□□□□□ -0.65
VSTM4-202ENST00000332853 CLDN16Q9Y5I7 305 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 LOC105371242A0A075B767 164 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 BMI1P35226 326 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 PACRGQ96M98 296 aaPredicted RBP10.97□□□□□ -0.65
VSTM4-202ENST00000332853 TRAV24A0A0B4J272 114 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 M0R2Z0 102 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 EGR1P18146 543 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 OR9G1Q8NH87 305 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 RALYQ9UKM9 306 aaKnown RBP10.97□□□□□ -0.65
VSTM4-202ENST00000332853 IGHV1-18A0A0C4DH31 117 aa10.97□□□□□ -0.65
VSTM4-202ENST00000332853 B9A039 149 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 IFNL4K9M1U5 179 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 NDUFA2O43678 99 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 ZNF273Q14593 569 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 ZNF385CQ66K41 422 aaPredicted RBP10.96□□□□□ -0.65
VSTM4-202ENST00000332853 TFF3Q07654 80 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 OR4C13Q8NGP0 309 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 RBM14Q96PK6 669 aaKnown RBP10.96□□□□□ -0.65
VSTM4-202ENST00000332853 RNF126Q9BV68 326 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 SEMA5BQ9P283 1151 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 CGB1A6NKQ9 187 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 TRGC2P03986 189 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 MMD2Q8IY49 270 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 MRPL37Q9BZE1 423 aaKnown RBP10.96□□□□□ -0.65
VSTM4-202ENST00000332853 MIOXQ9UGB7 285 aa10.96□□□□□ -0.65
VSTM4-202ENST00000332853 MPDU1O75352 247 aa10.96□□□□□ -0.66
VSTM4-202ENST00000332853 CA2P00918 260 aa10.96□□□□□ -0.66
VSTM4-202ENST00000332853 LY6EQ16553 131 aa10.96□□□□□ -0.66
VSTM4-202ENST00000332853 LHFPL5Q8TAF8 219 aa10.96□□□□□ -0.66
VSTM4-202ENST00000332853 FAM106CPP0CH98 169 aa10.96□□□□□ -0.66
VSTM4-202ENST00000332853 DPF1Q92782 380 aa10.96□□□□□ -0.66
VSTM4-202ENST00000332853 ZNF524Q96C55 264 aa10.96□□□□□ -0.66
VSTM4-202ENST00000332853 CLEC7AQ9BXN2 247 aa10.96□□□□□ -0.66
VSTM4-202ENST00000332853 WDR82Q6UXN9 313 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 GALNT14Q96FL9 552 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 KIF26AQ9ULI4 1882 aaPredicted RBP10.95□□□□□ -0.66
VSTM4-202ENST00000332853 UCP1P25874 307 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 PLSCR2Q9NRY7 297 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 ZNF581Q9P0T4 197 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 RABAC1Q9UI14 185 aa10.95□□□□□ -0.66
VSTM4-202ENST00000332853 GOLT1BQ9Y3E0 138 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms