RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 DMRTA2Q96SC8 542 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.42□□□□□ -0.26
SYNM-201ENST00000328642 CD1BP29016 333 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 PRSS33Q8NF86 280 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 FAM122AQ96E09 287 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 RAB1BQ9H0U4 201 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 MRPL41Q8IXM3 137 aaKnown RBP13.42□□□□□ -0.26
SYNM-201ENST00000328642 TAF15Q92804 592 aaKnown RBP eCLIP13.42□□□□□ -0.26
SYNM-201ENST00000328642 OR51B2Q9Y5P1 312 aa13.42□□□□□ -0.26
SYNM-201ENST00000328642 PITX3O75364 302 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 GAPDHP04406 335 aaKnown RBP13.41□□□□□ -0.26
SYNM-201ENST00000328642 MYOD1P15172 320 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 CENPEQ02224 2701 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 ZNF273Q14593 569 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 PSG5Q15238 335 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 TRAT1Q6PIZ9 186 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 DBX2Q6ZNG2 339 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 Q6ZRM9 215 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 RAB1CQ92928 201 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 NAPSAO96009 420 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 HLA-GP17693 338 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 ZNF90Q03938 601 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 MMDQ15546 238 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 SLC35E4Q6ICL7 350 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 FGF23Q9GZV9 251 aaPredicted RBP13.41□□□□□ -0.26
SYNM-201ENST00000328642 PLSCR4Q9NRQ2 329 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 HPRT1P00492 218 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 SPP1P10451 314 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 SLC35B1P78383 322 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 ZNF497Q6ZNH5 498 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 CD177Q8N6Q3 437 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 DAZAP1Q96EP5 407 aaKnown RBP13.41□□□□□ -0.26
SYNM-201ENST00000328642 SEC11CQ9BY50 192 aa13.41□□□□□ -0.26
SYNM-201ENST00000328642 A0A0G2JNJ9 132 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 C11orf94C9JXX5 98 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 PPP1R2P9O14990 202 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 MBP02144 154 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 TCF15Q12870 199 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 ZNF324BQ6AW86 544 aaPredicted RBP13.4□□□□□ -0.26
SYNM-201ENST00000328642 GCSAMQ8N6F7 178 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 RNF138Q8WVD3 245 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 SAMD10Q9BYL1 202 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 Q9UFV3 132 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 IGKV3-7A0A075B6H7 116 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 FLI1Q01543 452 aaPredicted RBP13.4□□□□□ -0.26
SYNM-201ENST00000328642 TFF3Q07654 80 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 FAM90A1Q86YD7 464 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 CDKN1AP38936 164 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 FABP9Q0Z7S8 132 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 WDR25Q64LD2 544 aaPredicted RBP13.4□□□□□ -0.26
SYNM-201ENST00000328642 Q6ZR03 302 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 COLCA1Q6ZS62 124 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 CMTM2Q8TAZ6 248 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 TCF19Q9Y242 345 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 SLC25A15Q9Y619 301 aa13.4□□□□□ -0.26
SYNM-201ENST00000328642 F6UZH7 168 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 ZNF343Q6P1L6 599 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 KCNIP4Q6PIL6 250 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 OR1B1Q8NGR6 318 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 RAB24Q969Q5 203 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 TMEM56Q96MV1 263 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 DYSFO75923 2080 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 ERVFC1-1P60608 527 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 TMEM241Q24JQ0 296 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 LHFPL4Q7Z7J7 247 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 RNF115Q9Y4L5 304 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 IGHV1-46P01743 117 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 SLC24A4Q8NFF2 622 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 IGHV1-69-2A0A0G2JMI3 117 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 H0Y8G0 127 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 DANCRP0C864 163 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 OR10J1P30954 320 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 Q6ZS92 163 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 SLC16A13Q7RTY0 426 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 COQ2Q96H96 371 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 C18orf12Q96KH6 178 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 VSIRQ9H7M9 311 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 PLSCR2Q9NRY7 297 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 TMEM106BQ9NUM4 274 aa13.39□□□□□ -0.27
SYNM-201ENST00000328642 NAV3Q8IVL0 2385 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 C10orf142B7Z368 130 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 THBS3P49746 956 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 LYZP61626 148 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 TBR1Q16650 682 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 C12orf57Q99622 126 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 CYTL1Q9NRR1 136 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 ZDHHC8Q9ULC8 765 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 EML5Q05BV3 1969 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 IGHV3OR16-8A0A075B7F1 116 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 CDK2AP1O14519 115 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 HOXD4P09016 255 aaPredicted RBP13.38□□□□□ -0.27
SYNM-201ENST00000328642 UBE2G1P62253 170 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 GCSAMLQ5JQS6 135 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 EAF1Q96JC9 268 aaPredicted RBP13.38□□□□□ -0.27
SYNM-201ENST00000328642 USB1Q9BQ65 265 aaKnown RBP13.38□□□□□ -0.27
SYNM-201ENST00000328642 A1L4Q6 167 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 C17orf100A8MU93 164 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 S100A12P80511 92 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 TIGITQ495A1 244 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms