RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 M0R1B8 84 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 USF1P22415 310 aaPredicted RBP10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 PAX9P55771 341 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 ARL16Q0P5N6 197 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 ZNF124Q15973 351 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 FAM162BQ5T6X4 162 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 ARL2-SNX15V9GYD0 113 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 NEURL1O76050 574 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 MT-ND6P03923 174 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 SP1P08047 785 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 SSTR5P35346 364 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 FOXG1P55316 489 aaPredicted RBP10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 ETFRF1Q6IPR1 90 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 HS3ST6Q96QI5 342 aa10.76□□□□□ -0.69
DNMT3A-202ENST00000321117 IGKV1-6A0A0C4DH72 117 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 CAMPP49913 170 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 PCSK4Q6UW60 755 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 ABHD12Q8N2K0 398 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 ADTRPQ96IZ2 230 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 DEPPQ9NTK1 212 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 PILRBQ9UKJ0 227 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 PCDH15Q96QU1 1955 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 CHEK1O14757 476 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 PPIHO43447 177 aaKnown RBP10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 RAMP3O60896 148 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 C1QTNF9P0C862 333 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 PRDX2P32119 198 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 PTTG1IPP53801 180 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 CASP6P55212 293 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 RPL31P62899 125 aaKnown RBP10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 WNT9BO14905 357 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 GZMBP10144 247 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 STUMQ69YW2 141 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 SLC35E4Q6ICL7 350 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 TMPRSS7Q7RTY8 843 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 ZNF703Q9H7S9 590 aaPredicted RBP10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 RNF115Q9Y4L5 304 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 CT45A6P0DMU7 189 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 CT45A5P0DMU8 189 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 CT45A7P0DMV0 189 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 CT45A1Q5HYN5 189 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 ZNF497Q6ZNH5 498 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 OR4B1Q8NGF8 309 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 CT45A3Q8NHU0 189 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 ZCCHC14Q8WYQ9 949 aaKnown RBP10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 IMMP2LQ96T52 175 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 ARRDC1-AS1Q9H2J1 176 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 BET1LQ9NYM9 111 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 HSPB7Q9UBY9 170 aa10.75□□□□□ -0.69
DNMT3A-202ENST00000321117 FER1L5A0AVI2 2057 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 MUC22E2RYF6 1773 aaPredicted RBP10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 NCOR1O75376 2440 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 MMD2Q8IY49 270 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 DEFA4P12838 97 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 CDPF1Q6NVV7 123 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 C20orf204Q6ZNR8 217 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 ZNF664Q8N3J9 261 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 WIPI2Q9Y4P8 454 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 PGPEP1LA6NFU8 196 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 GCHFRP30047 84 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 ZNF83P51522 516 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 KIAA1644Q3SXP7 199 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 TMEM14EPQ6UXP3 125 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 VKORC1L1Q8N0U8 176 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 FAM216AQ8WUB2 273 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 TCF19Q9Y242 345 aa10.74□□□□□ -0.69
DNMT3A-202ENST00000321117 SLC17A3O00476 420 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 ACSF3Q4G176 576 aaPredicted RBP10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 OR10X1Q8NGY0 326 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 KLF14Q8TD94 323 aaPredicted RBP10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 AGMATQ9BSE5 352 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 TMEM140Q9NV12 185 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 MRPS18CQ9Y3D5 142 aaKnown RBP10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 GVINP1Q7Z2Y8 2422 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 SCO2A0A1W2PP80 73 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 C21orf140B9A014 251 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 J3QR06 171 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 TCF23Q7RTU1 214 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 C2orf88Q9BSF0 95 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 PRNDQ9UKY0 176 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 M0R2Z0 102 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 MGST3O14880 152 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 PQLC2Q6ZP29 291 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 TPPP3Q9BW30 176 aa10.73□□□□□ -0.69
DNMT3A-202ENST00000321117 APCSP02743 223 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 CD99P14209 185 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 MAS1LP35410 378 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 OPRK1P41145 380 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 B3GALT5-AS1P59052 145 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 DHRS13Q6UX07 377 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 BEND2Q8NDZ0 799 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 PRDM13Q9H4Q3 707 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 IGHV3OR15-7A0A075B7D8 119 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 J3QW42 95 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 HES4Q9HCC6 221 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 ZNF835Q9Y2P0 537 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 TRBV6-6A0A0A6YYG2 114 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 TCF21O43680 179 aa10.72□□□□□ -0.69
DNMT3A-202ENST00000321117 CRYBB3P26998 211 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms