RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 PPIAL4EA0A075B759 164 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 PPIAL4DF5H284 164 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 TGFBR3LH3BV60 316 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 PPIAL4FP0DN26 164 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 UCP1P25874 307 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 CDX2Q99626 313 aaPredicted RBP12.12□□□□□ -0.47
COL1A2-201ENST00000297268 CALYQ9NYX4 217 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 PPIAL4AQ9Y536 164 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 PARP14Q460N5 1801 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 ANKRD36A6QL64 1941 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 CCL8P80075 99 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 TRIP6Q15654 476 aaKnown RBP12.11□□□□□ -0.47
COL1A2-201ENST00000297268 GUCD1Q96NT3 240 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 C1RLQ9NZP8 487 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 IGHV3-72A0A0B4J1Y9 119 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 M0R3E3 92 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 CALHM1Q8IU99 346 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 ZNF502Q8TBZ5 544 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 OTOFQ9HC10 1997 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 IGKV3-7A0A075B6H7 116 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 SLC17A3O00476 420 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 RRHO14718 337 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 COX5BP10606 129 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 C1orf174Q8IYL3 243 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 IL36BQ9NZH7 164 aa12.11□□□□□ -0.47
COL1A2-201ENST00000297268 TBL2Q9Y4P3 447 aaKnown RBP12.11□□□□□ -0.47
COL1A2-201ENST00000297268 NPIPB7O75200 414 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 LYPD3O95274 346 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 ICAM4Q14773 271 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 FAM214BQ7L5A3 538 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 WDR31Q8NA23 367 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 TFF3Q07654 80 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 SLC25A45Q8N413 288 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 OR5R1Q8NH85 324 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 ITLN1Q8WWA0 313 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 LEAP2Q969E1 77 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 FGF5P12034 268 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 C14orf144Q96I85 54 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 JPT1Q9UK76 154 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 AUP1Q9Y679 476 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 RBPMS2Q6ZRY4 209 aaKnown RBP12.1□□□□□ -0.47
COL1A2-201ENST00000297268 OR10AG1Q8NH19 301 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 SRSF12Q8WXF0 261 aaKnown RBP12.1□□□□□ -0.47
COL1A2-201ENST00000297268 OR5P3Q8WZ94 311 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 SFXN3Q9BWM7 321 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 MS4A5Q9H3V2 200 aa12.1□□□□□ -0.47
COL1A2-201ENST00000297268 SPSB2Q99619 263 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 REG4Q9BYZ8 158 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 F11RQ9Y624 299 aaKnown RBP12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HS3ST3B1Q9Y662 390 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 LOC107984156A0A0G2JMH3 177 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 IL6RP08887 468 aaPredicted RBP12.09□□□□□ -0.47
COL1A2-201ENST00000297268 ARL17AQ8IVW1 177 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 OR1N2Q8NGR9 330 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 F2RL2O00254 374 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 MC5RP33032 325 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 C19orf24Q9BVV8 132 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 hCG_38984A0A1B0GV85 526 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 TMEM238LA0A1B0GVL6 79 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 A6NJY4 79 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 H3BTX0 84 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 P2RY6Q15077 328 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 C18orf12Q96KH6 178 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 NDUFAF3Q9BU61 184 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 OPN3Q9H1Y3 402 aaPredicted RBP12.09□□□□□ -0.47
COL1A2-201ENST00000297268 CACNA1IQ9P0X4 2223 aa12.09□□□□□ -0.47
COL1A2-201ENST00000297268 ATP5G3P48201 142 aa12.08□□□□□ -0.47
COL1A2-201ENST00000297268 ECSCRQ19T08 205 aa12.08□□□□□ -0.47
COL1A2-201ENST00000297268 RTN4RQ9BZR6 473 aa12.08□□□□□ -0.47
COL1A2-201ENST00000297268 IDI2-AS1Q9NZ38 188 aa12.08□□□□□ -0.47
COL1A2-201ENST00000297268 B4E171 279 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 PTGDSP41222 190 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 TSPAN7P41732 249 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 TMEM70Q9BUB7 260 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 SCO2A0A1W2PP80 73 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 SH2D7A6NKC9 451 aaPredicted RBP12.08□□□□□ -0.48
COL1A2-201ENST00000297268 RPL23P62829 140 aaKnown RBP12.08□□□□□ -0.48
COL1A2-201ENST00000297268 OR51G1Q8NGK1 321 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 KLF14Q8TD94 323 aaPredicted RBP12.08□□□□□ -0.48
COL1A2-201ENST00000297268 MRPL32Q9BYC8 188 aaKnown RBP12.08□□□□□ -0.48
COL1A2-201ENST00000297268 PROB1E7EW31 1015 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 COX6A1P12074 109 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 ZNF525Q8N782 197 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 TMEM208Q9BTX3 173 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 ALPK2Q86TB3 2170 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 COLCA2A8K830 154 aa12.08□□□□□ -0.48
COL1A2-201ENST00000297268 SIPA1L1O43166 1804 aa12.07□□□□□ -0.48
COL1A2-201ENST00000297268 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms