RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 OBSL1O75147 1896 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 OR5AC2Q9NZP5 309 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 TUBD1Q9UJT1 453 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 SPCS1Q9Y6A9 102 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 J3QR06 171 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 C1QL1O75973 258 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 AGAP20933 346 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 CKS1BP61024 79 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 TCF24Q7RTU0 167 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 ASCL5Q7RTU5 278 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 MOGAT3Q86VF5 341 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 NPDC1Q9NQX5 325 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-201ENST00000295550 THSD7BQ9C0I4 1608 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 CEACAM18A8MTB9 384 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 H0YL77 283 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 RNFT1Q5M7Z0 435 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 RND1Q92730 232 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 OR2A4O95047 310 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 IGHMP01871 453 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 RPS20P60866 119 aaKnown RBP8.53□□□□□ -1.04
COL6A3-201ENST00000295550 OR2A7Q96R45 310 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 K7N7A8 449 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 CBLN1P23435 193 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 SRD5A2P31213 254 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 ZP4Q12836 540 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 MEIG1Q5JSS6 88 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 GPR35Q9HC97 309 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 MEF2CQ06413 473 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-201ENST00000295550 MESP2Q0VG99 397 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 ZNF324BQ6AW86 544 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-201ENST00000295550 OR2H1Q9GZK4 316 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 TMEM56-RWDD3S4R434 201 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 PQLC2LA1A4F0 135 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 HIST1H1AQ02539 215 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-201ENST00000295550 UNQ9370/PRO34162Q6UXP9 181 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 WDR54Q9H977 334 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 KCNMB2Q9Y691 235 aa8.53□□□□□ -1.04
COL6A3-201ENST00000295550 TMEM222Q9H0R3 208 aa8.52□□□□□ -1.04
COL6A3-201ENST00000295550 SHISA7A6NL88 538 aa8.52□□□□□ -1.04
COL6A3-201ENST00000295550 BIVMQ86UB2 503 aa8.52□□□□□ -1.04
COL6A3-201ENST00000295550 WNT2BQ93097 391 aa8.52□□□□□ -1.04
COL6A3-201ENST00000295550 UPK3AO75631 287 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 WFDC3Q8IUB2 231 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 SLC25A40Q8TBP6 338 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 PRELID3AQ96N28 172 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 RBKSQ9H477 322 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 FAM90A27PA6NNH2 459 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 FCGR2BP31994 310 aaPredicted RBP8.52□□□□□ -1.05
COL6A3-201ENST00000295550 ZNF660Q6AZW8 331 aaPredicted RBP8.52□□□□□ -1.05
COL6A3-201ENST00000295550 ZBTB34Q8NCN2 500 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 KCNS1Q96KK3 526 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 SH3BGRL3Q9H299 93 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 LDLRAD4O15165 306 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 MPDU1O75352 247 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 NHLRC3Q5JS37 347 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 GALNT14Q96FL9 552 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 CSPG4Q6UVK1 2322 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 A0A0U1RQV5 110 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 PATE4P0C8F1 98 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 ANOS1P23352 680 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 EBLN2Q6P2I7 272 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 CTHRC1Q96CG8 243 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 ZDHHC8Q9ULC8 765 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 NPIPB9F8W1W9 429 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 NPIPB7O75200 414 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 MYF5P13349 255 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 OR4A5Q8NH83 315 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 TBL2Q9Y4P3 447 aaKnown RBP8.52□□□□□ -1.05
COL6A3-201ENST00000295550 MPTX1A8MV57 137 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 IGLV3-21P80748 117 aaPredicted RBP8.52□□□□□ -1.05
COL6A3-201ENST00000295550 GUSBP11Q6P575 273 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 SLC22A18ASQ8N1D0 253 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 TMEM160Q9NX00 188 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 DPRXA6NFQ7 191 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 CGB1A6NKQ9 187 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 LINC00469Q8N7U9 141 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 AQP10Q96PS8 301 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 RASL10BQ96S79 203 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 SCNM1Q9BWG6 230 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 WNT10AQ9GZT5 417 aa8.52□□□□□ -1.05
COL6A3-201ENST00000295550 C2orf16Q68DN1 1984 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 CACNG7P62955 275 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 SAPCD1Q5SSQ6 148 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 LINC00470Q9BZP3 86 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 INSIG2Q9Y5U4 225 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 OR11H12B2RN74 326 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 C1orf100Q5SVJ3 147 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.51□□□□□ -1.05
COL6A3-201ENST00000295550 OR11H1Q8NG94 326 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 OR11H2Q8NH07 326 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 KIR2DL4Q99706 377 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 EAF1Q96JC9 268 aaPredicted RBP8.51□□□□□ -1.05
COL6A3-201ENST00000295550 TRAV17A0A0B4J275 112 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 RAB1CQ92928 201 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 CDIPTO14735 213 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 GPR82Q96P67 336 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 PLAUP00749 431 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 MMDQ15546 238 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 C14orf144Q96I85 54 aa8.51□□□□□ -1.05
COL6A3-201ENST00000295550 TIMP4Q99727 224 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms