RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 PRELID3AQ96N28 172 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 EDN3P14138 238 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 CXCL2P19875 107 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 NUTF2P61970 127 aaKnown RBP12.68□□□□□ -0.38
SEC16A-202ENST00000290037 KIAA1671Q9BY89 1806 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 PLXNB3Q9ULL4 1909 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 LINC00869P0C866 280 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 FUT5Q11128 374 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 FAM71F2Q6NXP2 309 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 OR2W5A6NFC9 320 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 IL11P20809 199 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 CAMPP49913 170 aa12.68□□□□□ -0.38
SEC16A-202ENST00000290037 PARD6GQ9BYG4 376 aaPredicted RBP12.68□□□□□ -0.38
SEC16A-202ENST00000290037 COX6A1P12074 109 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 C5orf52A6NGY3 159 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 IGKV1D-16P01601 117 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 C2orf68Q2NKX9 166 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 C9orf50Q5SZB4 431 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 TMEM140Q9NV12 185 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 LY96Q9Y6Y9 160 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 SPINT1O43278 529 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 DDTP30046 118 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 DLX6P56179 175 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 TNFRSF19Q9NS68 423 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 FADS6Q8N9I5 356 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 IER3P46695 156 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 A0A0J9YW62 118 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 CKS2P33552 79 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 OR2J3O76001 311 aa12.67□□□□□ -0.38
SEC16A-202ENST00000290037 GPA33Q99795 319 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 SMPXQ9UHP9 88 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
SEC16A-202ENST00000290037 Q6ZS49 121 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 SLC16A13Q7RTY0 426 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 LINC00312Q9Y6C7 94 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 FER1L5A0AVI2 2057 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 CLDND2Q8NHS1 167 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 DLL3Q9NYJ7 618 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 SDK2Q58EX2 2172 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 TINAGQ9UJW2 476 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 M0R3E3 92 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 ZNF703Q9H7S9 590 aaPredicted RBP12.66□□□□□ -0.38
SEC16A-202ENST00000290037 CHD3Q12873 2000 aaKnown RBP12.66□□□□□ -0.38
SEC16A-202ENST00000290037 SGK494Q96LW2 274 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 IGFBP3P17936 291 aaPredicted RBP12.66□□□□□ -0.38
SEC16A-202ENST00000290037 FAM53AQ6NSI3 398 aaPredicted RBP12.66□□□□□ -0.38
SEC16A-202ENST00000290037 C11orf42Q8N5U0 333 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 PLA2G3Q9NZ20 509 aa12.66□□□□□ -0.38
SEC16A-202ENST00000290037 NPIPB11E5RHQ5 1161 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 TCL1AP56279 114 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 INSL4Q14641 139 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 C3orf80F5H4A9 247 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 FHITP49789 147 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 RALYQ9UKM9 306 aaKnown RBP12.65□□□□□ -0.38
SEC16A-202ENST00000290037 CACNG7P62955 275 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 MGAT2Q10469 447 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 RAB37Q96AX2 223 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 C10orf111Q8N326 155 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 RFESDQ8TAC1 157 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 MPZL1O95297 269 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 SLC50A1Q9BRV3 221 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 CA2P00918 260 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 MYOD1P15172 320 aa12.65□□□□□ -0.38
SEC16A-202ENST00000290037 PHF3Q92576 2039 aaKnown RBP12.65□□□□□ -0.39
SEC16A-202ENST00000290037 RTP5Q14D33 572 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 RAX2Q96IS3 184 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 GUCD1Q96NT3 240 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 ZNF257Q9Y2Q1 563 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 PHLDA3Q9Y5J5 127 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 AKAP6Q13023 2319 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 TUSC1Q2TAM9 212 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 TSPO2Q5TGU0 170 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 PVRIGQ6DKI7 326 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 PCGF1Q9BSM1 259 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 YPEL1O60688 119 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 APCDD1LQ8NCL9 501 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 YPEL2Q96QA6 119 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 C2orf88Q9BSF0 95 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 A0A1B0GTI1 187 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 MRPL54Q6P161 138 aaKnown RBP12.64□□□□□ -0.39
SEC16A-202ENST00000290037 FAM169BQ8N8A8 192 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 F8VVB4 439 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 F8VWA3 439 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 H3BRM9 83 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 IL18BPO95998 194 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 LDLRAD3Q86YD5 345 aa12.64□□□□□ -0.39
SEC16A-202ENST00000290037 DEFB108AA8MXU0 73 aa12.63□□□□□ -0.39
SEC16A-202ENST00000290037 ASCL2Q99929 193 aa12.63□□□□□ -0.39
SEC16A-202ENST00000290037 TRBV6-6A0A0A6YYG2 114 aa12.63□□□□□ -0.39
SEC16A-202ENST00000290037 AESQ08117 197 aa12.63□□□□□ -0.39
SEC16A-202ENST00000290037 HOXB3P14651 431 aaPredicted RBP12.63□□□□□ -0.39
SEC16A-202ENST00000290037 PCOLCEQ15113 449 aa12.63□□□□□ -0.39
SEC16A-202ENST00000290037 REPIN1Q9BWE0 567 aaKnown RBP12.63□□□□□ -0.39
SEC16A-202ENST00000290037 TM4SF20Q53R12 229 aa12.63□□□□□ -0.39
SEC16A-202ENST00000290037 SLC22A18ASQ8N1D0 253 aa12.63□□□□□ -0.39
SEC16A-202ENST00000290037 SLC25A2Q9BXI2 301 aa12.63□□□□□ -0.39
SEC16A-202ENST00000290037 TCF19Q9Y242 345 aa12.63□□□□□ -0.39
SEC16A-202ENST00000290037 DIDO1Q9BTC0 2240 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms