RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 AGAP20933 346 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 ZNF658BQ4V348 819 aaPredicted RBP6.89□□□□□ -1.31
LIMD1-201ENST00000273317 H7C1H1 209 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 ITGBL1O95965 494 aaPredicted RBP6.89□□□□□ -1.31
LIMD1-201ENST00000273317 HBBP68871 147 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 C10orf128Q5T292 105 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 SELENOHQ8IZQ5 122 aaKnown RBP6.89□□□□□ -1.31
LIMD1-201ENST00000273317 FAM216AQ8WUB2 273 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 A0A1W2PPV9 198 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 LCN2P80188 198 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 DNAJC4Q9NNZ3 241 aa6.89□□□□□ -1.31
LIMD1-201ENST00000273317 ZNF418Q8TF45 676 aaPredicted RBP6.88□□□□□ -1.31
LIMD1-201ENST00000273317 ZNF414Q96IQ9 312 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 UCN2Q96RP3 112 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 PRDM14Q9GZV8 571 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 KLHDC2Q9Y2U9 406 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 CELA2BP08218 269 aaPredicted RBP6.88□□□□□ -1.31
LIMD1-201ENST00000273317 NANOS3P60323 173 aaKnown RBP6.88□□□□□ -1.31
LIMD1-201ENST00000273317 DCAF10Q5QP82 559 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 RARRES2Q99969 163 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 TTTY12Q9BZ98 90 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 TMSB15BA0A087X1C1 80 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 CD8AP01732 235 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 LIPFP07098 398 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 PLSCR2Q9NRY7 297 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 A0A1W2PQM1 296 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 LAMTOR1Q6IAA8 161 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 TMEM92Q6UXU6 159 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 MRAP2Q96G30 205 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 MARCH11A6NNE9 402 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 SOD3P08294 240 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 COX5BP10606 129 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 PRELID3AQ96N28 172 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 FAM60AQ9NP50 221 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 PPIAL4EA0A075B759 164 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 PPIAL4DF5H284 164 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 PPIAL4FP0DN26 164 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 C2orf83Q53S99 150 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 PPIAL4AQ9Y536 164 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 UCP3P55916 312 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 CD200R1LQ6Q8B3 271 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 PARLQ9H300 379 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 LOC390937A0A1W2PQ73 354 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 COL9A1P20849 921 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 PTGDSP41222 190 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 MFAP4P55083 255 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 TMEM252Q8N6L7 170 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 OR51G1Q8NGK1 321 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 OR4C13Q8NGP0 309 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 C8orf88P0DMB2 117 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 ERGP11308 486 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 HINT1P49773 126 aaPredicted RBP6.88□□□□□ -1.31
LIMD1-201ENST00000273317 FAM106AQ4KMX7 169 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 Q6AWC8 147 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 C2orf88Q9BSF0 95 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 GPR132Q9UNW8 380 aa6.88□□□□□ -1.31
LIMD1-201ENST00000273317 BRWD3Q6RI45 1802 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 A1L4Q6 167 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 SRIP30626 198 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 ARF6P62330 175 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 DEFB124Q8NES8 71 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 GPR82Q96P67 336 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 TGIF2-C20orf24A0A0A6YYL0 155 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 PRR33A8MZF0 331 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 MIC13Q5XKP0 118 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 KCNS1Q96KK3 526 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 Q96M66 194 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 NCOA6Q14686 2063 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 AGFG2O95081 481 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 SNRPD3P62318 126 aaKnown RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 ATP5G2Q06055 141 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 CRISPLD2Q9H0B8 497 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 GEMIN7Q9H840 131 aaKnown RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 CX3CL1P78423 397 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 ZNF506Q5JVG8 444 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 NUDT10Q8NFP7 164 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 NUDT11Q96G61 164 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 SGK494Q96LW2 274 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 PIMREGQ9BSJ6 248 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 MRPL16Q9NX20 251 aaKnown RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 NBASA2RRP1 2371 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 NRXN2Q9P2S2 1712 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 ODAMA1E959 279 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 RUNX1Q01196 453 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 SIP14410 1827 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 H3BRM9 83 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 HRKO00198 91 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 P2RY4P51582 365 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 RIPPLY2Q5TAB7 128 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 ATOH7Q8N100 152 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 POC1AQ8NBT0 407 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 FSCN3Q9NQT6 498 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 AUP1Q9Y679 476 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 HYAL3O43820 417 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 PGLYRP1O75594 196 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-201ENST00000273317 OR2H2O95918 312 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 MPV17P39210 176 aa6.87□□□□□ -1.31
LIMD1-201ENST00000273317 MEF2CQ06413 473 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms