RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 OR4A16Q8NH70 328 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 PARLQ9H300 379 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 C15orf62A8K5M9 175 aa12.13□□□□□ -0.47
CNOT3-201ENST00000221232 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
CNOT3-201ENST00000221232 TGIF2LYQ8IUE0 185 aa12.13□□□□□ -0.47
CNOT3-201ENST00000221232 Q8TCH9 128 aa12.13□□□□□ -0.47
CNOT3-201ENST00000221232 ITLN1Q8WWA0 313 aa12.13□□□□□ -0.47
CNOT3-201ENST00000221232 HSD17B10Q99714 261 aaKnown RBP12.13□□□□□ -0.47
CNOT3-201ENST00000221232 ACTR3CQ9C0K3 210 aaPredicted RBP12.13□□□□□ -0.47
CNOT3-201ENST00000221232 C22orf34Q6ZV56 151 aa12.13□□□□□ -0.47
CNOT3-201ENST00000221232 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
CNOT3-201ENST00000221232 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
CNOT3-201ENST00000221232 ZNRD1Q9P1U0 126 aa12.13□□□□□ -0.47
CNOT3-201ENST00000221232 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
CNOT3-201ENST00000221232 PLCE1Q9P212 2302 aa12.13□□□□□ -0.47
CNOT3-201ENST00000221232 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 CXorf65A6NEN9 183 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 FABP4P15090 132 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 HNF1AP20823 631 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 S100PP25815 95 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 BSXQ3C1V8 233 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 ZNF474Q6S9Z5 364 aaPredicted RBP12.12□□□□□ -0.47
CNOT3-201ENST00000221232 EDARADDQ8WWZ3 215 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 SNRNP40Q96DI7 357 aaKnown RBP12.12□□□□□ -0.47
CNOT3-201ENST00000221232 TCEAL7Q9BRU2 100 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 OR6C3Q9NZP0 311 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 LAMP3Q9UQV4 416 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 SLC25A15Q9Y619 301 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 PCNX1Q96RV3 2341 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 PGPEP1LA6NFU8 196 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 B4DEV8 164 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 K7EM74 188 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 IFNL4K9M1U5 179 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 IGLV1-44P01699 117 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 CD1BP29016 333 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 GNG10P50151 68 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 RPL23P62829 140 aaKnown RBP12.12□□□□□ -0.47
CNOT3-201ENST00000221232 ZNF66Q6ZN08 573 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 SSMEM1Q8WWF3 244 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 HIPK2Q9H2X6 1198 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 PTPRZ1P23471 2315 aaPredicted RBP12.12□□□□□ -0.47
CNOT3-201ENST00000221232 PPP1R2P9O14990 202 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 LY86O95711 162 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 CGAP01215 116 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 CHRNA7P36544 502 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 PNRC1Q12796 327 aaPredicted RBP12.12□□□□□ -0.47
CNOT3-201ENST00000221232 MEGF10Q96KG7 1140 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 P2RX4Q99571 388 aa12.12□□□□□ -0.47
CNOT3-201ENST00000221232 ATP6V1FQ16864 119 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 MBNL2Q5VZF2 373 aaKnown RBP12.11□□□□□ -0.47
CNOT3-201ENST00000221232 ZCCHC24Q8N2G6 241 aaKnown RBP12.11□□□□□ -0.47
CNOT3-201ENST00000221232 CIB3Q96Q77 187 aaPredicted RBP12.11□□□□□ -0.47
CNOT3-201ENST00000221232 DERL1Q9BUN8 251 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 AKAP13Q12802 2813 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 A0A1W2PPQ1 181 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 AHRRA9YTQ3 701 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 ADH4P08319 380 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 GZMHP20718 246 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 NPPCP23582 126 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 ATP5G3P48201 142 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 CDC34P49427 236 aaPredicted RBP12.11□□□□□ -0.47
CNOT3-201ENST00000221232 FAM27E3Q08E93 113 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 C9orf152Q5JTZ5 239 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 PIP4P1Q86T03 277 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 S1PR3Q99500 378 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 PCGF1Q9BSM1 259 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 OR51M1Q9H341 326 aa12.11□□□□□ -0.47
CNOT3-201ENST00000221232 A0A1W2PPV4 95 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 SRRM5B3KS81 715 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 C11orf94C9JXX5 98 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 S100A12P80511 92 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 MIC13Q5XKP0 118 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 ZADH2Q8N4Q0 377 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 ZNF383Q8NA42 475 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 C1orf162Q8NEQ5 155 aaPredicted RBP12.1□□□□□ -0.47
CNOT3-201ENST00000221232 TIMM9Q9Y5J7 89 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 H7BYZ3 331 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 KBTBD11O94819 623 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 GALR1P47211 349 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 FAM3BP58499 235 aaPredicted RBP12.1□□□□□ -0.47
CNOT3-201ENST00000221232 SH3BGRL2Q9UJC5 107 aa12.1□□□□□ -0.47
CNOT3-201ENST00000221232 GYPAP02724 150 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 ERVK-16P61578 105 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 HTD2P86397 168 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 PRSS8Q16651 343 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 LYG1Q8N1E2 194 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 FAM122AQ96E09 287 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 MS4A5Q9H3V2 200 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 MGST3O14880 152 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 HPRT1P00492 218 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 KLF3P57682 345 aaPredicted RBP12.09□□□□□ -0.47
CNOT3-201ENST00000221232 LOXL3P58215 753 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 P2RY6Q15077 328 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 IGFL2Q6UWQ7 119 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 CENPVQ7Z7K6 275 aaPredicted RBP12.09□□□□□ -0.47
CNOT3-201ENST00000221232 OR13D1Q8NGV5 346 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 OR4X1Q8NH49 305 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 CCL13Q99616 98 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms