RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SPRYD7Q5W111 196 aa11.59□□□□□ -0.55
PHGDH-228ENST00000641847 USP17L1Q7RTZ2 530 aa11.59□□□□□ -0.55
PHGDH-228ENST00000641847 IFNL1Q8IU54 200 aa11.59□□□□□ -0.55
PHGDH-228ENST00000641847 SMC5Q8IY18 1101 aa11.59□□□□□ -0.55
PHGDH-228ENST00000641847 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
PHGDH-228ENST00000641847 ZNF594Q96JF6 807 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-228ENST00000641847 SIL1Q9H173 461 aa11.59□□□□□ -0.55
PHGDH-228ENST00000641847 R3HDMLQ9H3Y0 253 aa11.59□□□□□ -0.55
PHGDH-228ENST00000641847 DCTPP1Q9H773 170 aa11.59□□□□□ -0.55
PHGDH-228ENST00000641847 SEC31BQ9NQW1 1179 aa11.59□□□□□ -0.55
PHGDH-228ENST00000641847 EXOC6BQ9Y2D4 811 aa11.59□□□□□ -0.55
PHGDH-228ENST00000641847 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.55
PHGDH-228ENST00000641847 TAF1P21675 1872 aa11.58□□□□□ -0.56
PHGDH-228ENST00000641847 H0YGN5 161 aa11.58□□□□□ -0.56
PHGDH-228ENST00000641847 APBB1O00213 710 aa11.58□□□□□ -0.56
PHGDH-228ENST00000641847 OS9Q13438 667 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-228ENST00000641847 SLC9C1Q4G0N8 1177 aa11.58□□□□□ -0.56
PHGDH-228ENST00000641847 HSP90AB4PQ58FF6 505 aa11.58□□□□□ -0.56
PHGDH-228ENST00000641847 PODNQ7Z5L7 613 aa11.58□□□□□ -0.56
PHGDH-228ENST00000641847 CDC5LQ99459 802 aaKnown RBP11.58□□□□□ -0.56
PHGDH-228ENST00000641847 PODXL2Q9NZ53 605 aa11.58□□□□□ -0.56
PHGDH-228ENST00000641847 NOP58Q9Y2X3 529 aaKnown RBP11.58□□□□□ -0.56
PHGDH-228ENST00000641847 A0A1B0GUL6 1792 aa11.58□□□□□ -0.56
PHGDH-228ENST00000641847 ZNF609O15014 1411 aa11.58□□□□□ -0.56
PHGDH-228ENST00000641847 ZBTB48P10074 688 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-228ENST00000641847 IGHMBP2P38935 993 aaKnown RBP11.57□□□□□ -0.56
PHGDH-228ENST00000641847 SP3Q02447 781 aa11.57□□□□□ -0.56
PHGDH-228ENST00000641847 G3BP1Q13283 466 aaKnown RBP eCLIP11.57□□□□□ -0.561e-7■■■■■ 37.6
PHGDH-228ENST00000641847 PRKG1Q13976 671 aa11.57□□□□□ -0.56
PHGDH-228ENST00000641847 ERC1Q8IUD2 1116 aa11.57□□□□□ -0.56
PHGDH-228ENST00000641847 APOBEC3FQ8IUX4 373 aaKnown RBP11.57□□□□□ -0.56
PHGDH-228ENST00000641847 ANGEL1Q9UNK9 670 aaKnown RBP11.57□□□□□ -0.56
PHGDH-228ENST00000641847 SCAF8Q9UPN6 1271 aaKnown RBP11.57□□□□□ -0.56
PHGDH-228ENST00000641847 LRRC37AA6NMS7 1700 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 EYA2O00167 538 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 PPP1R12BO60237 982 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-228ENST00000641847 RAB11FIP3O75154 756 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 CIAO1O76071 339 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 NBPF9Q3BBW0 867 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 CHRDL2Q6WN34 429 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 ANKRD18AQ8IVF6 992 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 CD99L2Q8TCZ2 262 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 GMLQ99445 158 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 CNNM1Q9NRU3 951 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-228ENST00000641847 MYO3BQ8WXR4 1341 aa11.56□□□□□ -0.56
PHGDH-228ENST00000641847 SMARCA5O60264 1052 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-228ENST00000641847 IL15P40933 162 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-228ENST00000641847 NUCB1Q02818 461 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 LRRC24Q50LG9 513 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 LDLRAD1Q5T700 205 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 RHPN1Q8TCX5 695 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 DPF3Q92784 378 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 KIF1BPQ96EK5 621 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 OTUD5Q96G74 571 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 ZNF333Q96JL9 665 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 MPHOSPH8Q99549 860 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 PUS3Q9BZE2 481 aaKnown RBP11.55□□□□□ -0.56
PHGDH-228ENST00000641847 LRRCC1Q9C099 1032 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-228ENST00000641847 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
PHGDH-228ENST00000641847 UNCXA6NJT0 531 aa11.54□□□□□ -0.56
PHGDH-228ENST00000641847 WNT10BO00744 389 aa11.54□□□□□ -0.56
PHGDH-228ENST00000641847 WDHD1O75717 1129 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-228ENST00000641847 LDHAL6AQ6ZMR3 332 aa11.54□□□□□ -0.56
PHGDH-228ENST00000641847 ATG9AQ7Z3C6 839 aa11.54□□□□□ -0.56
PHGDH-228ENST00000641847 CHD1LQ86WJ1 897 aa11.54□□□□□ -0.56
PHGDH-228ENST00000641847 FBXW7Q969H0 707 aa11.54□□□□□ -0.56
PHGDH-228ENST00000641847 LNPKQ9C0E8 428 aa11.54□□□□□ -0.56
PHGDH-228ENST00000641847 BCL11AQ9H165 835 aa11.54□□□□□ -0.56
PHGDH-228ENST00000641847 LAMA3Q16787 3333 aa11.54□□□□□ -0.56
PHGDH-228ENST00000641847 ARAP2Q8WZ64 1704 aa11.53□□□□□ -0.56
PHGDH-228ENST00000641847 SASH1O94885 1247 aa11.53□□□□□ -0.56
PHGDH-228ENST00000641847 ATP2B4P23634 1241 aa11.53□□□□□ -0.56
PHGDH-228ENST00000641847 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-228ENST00000641847 TFCP2Q12800 502 aa11.53□□□□□ -0.56
PHGDH-228ENST00000641847 CRHR2Q13324 411 aa11.53□□□□□ -0.56
PHGDH-228ENST00000641847 METTL24Q5JXM2 366 aa11.53□□□□□ -0.56
PHGDH-228ENST00000641847 IL1RAPL2Q9NP60 686 aa11.53□□□□□ -0.56
PHGDH-228ENST00000641847 RIPOR2Q9Y4F9 1068 aa11.53□□□□□ -0.56
PHGDH-228ENST00000641847 XDHP47989 1333 aa11.53□□□□□ -0.56
PHGDH-228ENST00000641847 MROH5Q6ZUA9 1318 aa11.53□□□□□ -0.56
PHGDH-228ENST00000641847 IGF2BP3O00425 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
PHGDH-228ENST00000641847 SUPT20HL1Q3ZLR7 823 aa11.52□□□□□ -0.57
PHGDH-228ENST00000641847 SKAP1Q86WV1 359 aa11.52□□□□□ -0.57
PHGDH-228ENST00000641847 WNK4Q96J92 1243 aa11.52□□□□□ -0.57
PHGDH-228ENST00000641847 BSDC1Q9NW68 430 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-228ENST00000641847 RBM27Q9P2N5 1060 aaKnown RBP11.52□□□□□ -0.57
PHGDH-228ENST00000641847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-228ENST00000641847 UNC80Q8N2C7 3258 aa11.52□□□□□ -0.57
PHGDH-228ENST00000641847 PDE4AP27815 886 aa11.51□□□□□ -0.57
PHGDH-228ENST00000641847 IREB2P48200 963 aaKnown RBP11.51□□□□□ -0.57
PHGDH-228ENST00000641847 KIF22Q14807 665 aa11.51□□□□□ -0.57
PHGDH-228ENST00000641847 STRIP1Q5VSL9 837 aa11.51□□□□□ -0.57
PHGDH-228ENST00000641847 CLASRPQ8N2M8 674 aaKnown RBP11.51□□□□□ -0.57
PHGDH-228ENST00000641847 VGLL2Q8N8G2 317 aa11.51□□□□□ -0.57
PHGDH-228ENST00000641847 HTATIP2Q9BUP3 242 aa11.51□□□□□ -0.57
PHGDH-228ENST00000641847 DEFB129Q9H1M3 183 aa11.51□□□□□ -0.57
PHGDH-228ENST00000641847 CEP126Q9P2H0 1117 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms