RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CCDC88AQ3V6T2 1871 aa18.35■□□□□ 0.53
CLN6-219ENST00000637329 SLC27A2O14975 620 aa18.35■□□□□ 0.53
CLN6-219ENST00000637329 HSPD1P10809 573 aaKnown RBP18.35■□□□□ 0.53
CLN6-219ENST00000637329 KRT32Q14532 448 aa18.35■□□□□ 0.53
CLN6-219ENST00000637329 TSGA10IPQ3SY00 556 aa18.35■□□□□ 0.53
CLN6-219ENST00000637329 C7orf43Q8WVR3 580 aa18.35■□□□□ 0.53
CLN6-219ENST00000637329 AIDAQ96BJ3 306 aa18.35■□□□□ 0.53
CLN6-219ENST00000637329 ABCF2Q9UG63 623 aa18.35■□□□□ 0.53
CLN6-219ENST00000637329 GNAT2P19087 354 aa18.34■□□□□ 0.53
CLN6-219ENST00000637329 SLFNL1Q499Z3 407 aa18.34■□□□□ 0.53
CLN6-219ENST00000637329 SOGA3Q5TF21 947 aa18.34■□□□□ 0.53
CLN6-219ENST00000637329 ERICH6Q7L0X2 663 aa18.34■□□□□ 0.53
CLN6-219ENST00000637329 TTLL6Q8N841 843 aa18.34■□□□□ 0.53
CLN6-219ENST00000637329 SUPT20HQ8NEM7 779 aa18.34■□□□□ 0.53
CLN6-219ENST00000637329 TBC1D22AQ8WUA7 517 aa18.34■□□□□ 0.53
CLN6-219ENST00000637329 RAI14Q9P0K7 980 aa18.34■□□□□ 0.53
CLN6-219ENST00000637329 CTNNA3Q9UI47 895 aa18.34■□□□□ 0.53
CLN6-219ENST00000637329 CD2APQ9Y5K6 639 aa18.34■□□□□ 0.53
CLN6-219ENST00000637329 BRCA1P38398 1863 aaKnown RBP18.34■□□□□ 0.53
CLN6-219ENST00000637329 FAM205AQ6ZU69 1335 aa18.33■□□□□ 0.53
CLN6-219ENST00000637329 MCM2P49736 904 aa18.33■□□□□ 0.52
CLN6-219ENST00000637329 CHAF1AQ13111 956 aaPredicted RBP18.33■□□□□ 0.52
CLN6-219ENST00000637329 GPR101Q96P66 508 aaPredicted RBP18.33■□□□□ 0.52
CLN6-219ENST00000637329 ZC3H12CQ9C0D7 883 aaKnown RBP18.33■□□□□ 0.52
CLN6-219ENST00000637329 TIAM2Q8IVF5 1701 aa18.32■□□□□ 0.52
CLN6-219ENST00000637329 PSMA5P28066 241 aa18.32■□□□□ 0.52
CLN6-219ENST00000637329 CCDC93Q567U6 631 aa18.32■□□□□ 0.52
CLN6-219ENST00000637329 NAA16Q6N069 864 aaPredicted RBP18.32■□□□□ 0.52
CLN6-219ENST00000637329 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
CLN6-219ENST00000637329 NSUN4Q96CB9 384 aaKnown RBP18.32■□□□□ 0.52
CLN6-219ENST00000637329 K7ELQ4 463 aaPredicted RBP18.31■□□□□ 0.52
CLN6-219ENST00000637329 MBD4O95243 580 aa18.31■□□□□ 0.52
CLN6-219ENST00000637329 DPEP1P16444 411 aa18.31■□□□□ 0.52
CLN6-219ENST00000637329 CYP7A1P22680 504 aa18.31■□□□□ 0.52
CLN6-219ENST00000637329 GSTO1P78417 241 aa18.31■□□□□ 0.52
CLN6-219ENST00000637329 VPS53Q5VIR6 699 aa18.31■□□□□ 0.52
CLN6-219ENST00000637329 CERS3Q8IU89 383 aa18.31■□□□□ 0.52
CLN6-219ENST00000637329 STRBPQ96SI9 672 aaKnown RBP18.31■□□□□ 0.52
CLN6-219ENST00000637329 SUGT1Q9Y2Z0 365 aa18.31■□□□□ 0.52
CLN6-219ENST00000637329 FOXP2O15409 715 aa18.3■□□□□ 0.52
CLN6-219ENST00000637329 TOMM70O94826 608 aa18.3■□□□□ 0.52
CLN6-219ENST00000637329 LDHBP07195 334 aaKnown RBP18.3■□□□□ 0.52
CLN6-219ENST00000637329 KCNA3P22001 575 aa18.3■□□□□ 0.52
CLN6-219ENST00000637329 PRDX5P30044 214 aa18.3■□□□□ 0.52
CLN6-219ENST00000637329 MECOMQ03112 1051 aa18.3■□□□□ 0.52
CLN6-219ENST00000637329 ALX1Q15699 326 aa18.3■□□□□ 0.52
CLN6-219ENST00000637329 OLFM4Q6UX06 510 aa18.3■□□□□ 0.52
CLN6-219ENST00000637329 DZIP1Q86YF9 867 aaKnown RBP18.3■□□□□ 0.52
CLN6-219ENST00000637329 RTKN2Q8IZC4 609 aa18.3■□□□□ 0.52
CLN6-219ENST00000637329 TNS4Q8IZW8 715 aa18.3■□□□□ 0.52
CLN6-219ENST00000637329 PSMD1Q99460 953 aa18.3■□□□□ 0.52
CLN6-219ENST00000637329 ZNF646O15015 1829 aaPredicted RBP18.29■□□□□ 0.52
CLN6-219ENST00000637329 CYP21A2P08686 494 aa18.29■□□□□ 0.52
CLN6-219ENST00000637329 PRELPP51888 382 aa18.29■□□□□ 0.52
CLN6-219ENST00000637329 NEK4P51957 841 aa18.29■□□□□ 0.52
CLN6-219ENST00000637329 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
CLN6-219ENST00000637329 PODNQ7Z5L7 613 aa18.29■□□□□ 0.52
CLN6-219ENST00000637329 DNAJC5GQ8N7S2 189 aa18.29■□□□□ 0.52
CLN6-219ENST00000637329 JAKMIP1Q96N16 626 aaKnown RBP18.29■□□□□ 0.52
CLN6-219ENST00000637329 ZSWIM6Q9HCJ5 1215 aa18.29■□□□□ 0.52
CLN6-219ENST00000637329 MAGEB6P1A0A0J9YX57 407 aa18.28■□□□□ 0.52
CLN6-219ENST00000637329 KIF3CO14782 793 aa18.28■□□□□ 0.52
CLN6-219ENST00000637329 HMGB1P09429 215 aaKnown RBP18.28■□□□□ 0.52
CLN6-219ENST00000637329 CASTP20810 708 aaKnown RBP18.28■□□□□ 0.52
CLN6-219ENST00000637329 KIAA2012Q0VF49 1180 aa18.28■□□□□ 0.52
CLN6-219ENST00000637329 ZNF384Q8TF68 577 aa18.28■□□□□ 0.52
CLN6-219ENST00000637329 RIOK1Q9BRS2 568 aaKnown RBP18.28■□□□□ 0.52
CLN6-219ENST00000637329 VPS33BQ9H267 617 aa18.28■□□□□ 0.52
CLN6-219ENST00000637329 PIM2Q9P1W9 311 aa18.28■□□□□ 0.52
CLN6-219ENST00000637329 CYP46A1Q9Y6A2 500 aa18.28■□□□□ 0.52
CLN6-219ENST00000637329 A0A0G2JLW4 131 aa18.27■□□□□ 0.52
CLN6-219ENST00000637329 CD2BP2O95400 341 aaKnown RBP18.27■□□□□ 0.52
CLN6-219ENST00000637329 FKBP1AP62942 108 aaKnown RBP18.27■□□□□ 0.52
CLN6-219ENST00000637329 COL13A1Q5TAT6 717 aaPredicted RBP18.27■□□□□ 0.52
CLN6-219ENST00000637329 SLF2Q8IX21 1173 aa18.27■□□□□ 0.52
CLN6-219ENST00000637329 LCORLQ8N3X6 602 aa18.27■□□□□ 0.52
CLN6-219ENST00000637329 TTC14Q96N46 770 aa18.27■□□□□ 0.52
CLN6-219ENST00000637329 NACAP1Q9BZK3 213 aa18.27■□□□□ 0.52
CLN6-219ENST00000637329 ARMT1Q9H993 441 aa18.27■□□□□ 0.52
CLN6-219ENST00000637329 PSME4Q14997 1843 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 PATL2C9JE40 543 aaKnown RBP18.26■□□□□ 0.51
CLN6-219ENST00000637329 G3V3G9 751 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 RIMBP2O15034 1052 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 C21orf2O43822 256 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 FGAP02671 866 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 LDHCP07864 332 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 ADCK5Q3MIX3 580 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 MFSD14BQ5SR56 506 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 DCAF8Q5TAQ9 597 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 GIMAP6Q6P9H5 292 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 RUFY3Q7L099 469 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 ADGRA1Q86SQ6 560 aa18.26■□□□□ 0.51
CLN6-219ENST00000637329 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
CLN6-219ENST00000637329 ALDH8A1Q9H2A2 487 aaPredicted RBP18.26■□□□□ 0.51
CLN6-219ENST00000637329 MROH7-TTC4A0A0A0MT08 1334 aa18.25■□□□□ 0.51
CLN6-219ENST00000637329 LAMB1P07942 1786 aa18.25■□□□□ 0.51
CLN6-219ENST00000637329 BLOC1S2Q6QNY1 142 aa18.25■□□□□ 0.51
CLN6-219ENST00000637329 MIGA1Q8NAN2 632 aa18.25■□□□□ 0.51
CLN6-219ENST00000637329 EPB41L4AQ9HCS5 686 aaPredicted RBP18.25■□□□□ 0.51
CLN6-219ENST00000637329 GSG1L2A8MUP6 293 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms