RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 MKI67P46013 3256 aaKnown RBP9.18□□□□□ -0.94
CACNA1A-222ENST00000636022 UNCXA6NJT0 531 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 CCDC85CA6NKD9 419 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 EYA2O00167 538 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 CRKP46108 304 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 RGS19P49795 217 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 RBM5P52756 815 aaKnown RBP eCLIP9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 RARSP54136 660 aaKnown RBP9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 RASA3Q14644 834 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 PUM3Q15397 648 aaKnown RBP9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 SUPT20HL1Q3ZLR7 823 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 CAVIN4Q5BKX8 364 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 NBPF12Q5TAG4 269 aaPredicted RBP9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 DZIP1LQ8IYY4 767 aaKnown RBP9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 TBC1D22AQ8WUA7 517 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 TEPSINQ96N21 525 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 CFHR5Q9BXR6 569 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 TDRD3Q9H7E2 651 aaKnown RBP9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 VEZTQ9HBM0 779 aa9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 ZNF70Q9UC06 446 aaPredicted RBP9.17□□□□□ -0.94
CACNA1A-222ENST00000636022 PPP1R12BO60237 982 aaPredicted RBP9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 USP2O75604 605 aaPredicted RBP9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 TBC1D8O95759 1140 aa9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 UBTFL1P0CB47 393 aaPredicted RBP9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 HDLBPQ00341 1268 aaKnown RBP9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 MKRN3Q13064 507 aaKnown RBP9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 CHAF1AQ13111 956 aaPredicted RBP9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 NOM1Q5C9Z4 860 aaKnown RBP9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 VPS37DQ86XT2 251 aa9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 CDAN1Q8IWY9 1227 aa9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 CLMNQ96JQ2 1002 aa9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 MRIQ9BWK5 157 aa9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 API5Q9BZZ5 524 aaKnown RBP9.16□□□□□ -0.94
CACNA1A-222ENST00000636022 OTOFQ9HC10 1997 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 MYH13Q9UKX3 1938 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 CIAO1O76071 339 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 IFIT1P09914 478 aaKnown RBP9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 ZBTB48P10074 688 aaPredicted RBP9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 SREBF2Q12772 1141 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 TNFAIP1Q13829 316 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 CTU1Q7Z7A3 348 aaKnown RBP9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 ZNF296Q8WUU4 475 aaPredicted RBP9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 LPIN2Q92539 896 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 ARHGAP45Q92619 1136 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 SLC10A4Q96EP9 437 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 WNK4Q96J92 1243 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 ZDHHC15Q96MV8 337 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 R3HDMLQ9H3Y0 253 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 FBXO3Q9UK99 471 aa9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 LRRFIP2Q9Y608 721 aaKnown RBP9.15□□□□□ -0.94
CACNA1A-222ENST00000636022 MANSC4A6NHS7 340 aaPredicted RBP9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 GPR25O00155 361 aa9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 FRAT2O75474 233 aaPredicted RBP9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 GJA5P36382 358 aa9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 IREB2P48200 963 aaKnown RBP9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 INHBEP58166 350 aa9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 INTS3Q68E01 1043 aaKnown RBP9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 APOBEC3HQ6NTF7 200 aaKnown RBP9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 TEKT1Q969V4 418 aa9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 MEIS3Q99687 375 aa9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 TMEM39BQ9GZU3 492 aa9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 COPRSQ9NQ92 184 aa9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 SUGT1Q9Y2Z0 365 aa9.14□□□□□ -0.95
CACNA1A-222ENST00000636022 TCP10L2B9ZVM9 353 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 IGF2BP3O00425 579 aaKnown RBP eCLIP9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 SLC5A1P13866 664 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 IL15P40933 162 aaPredicted RBP9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 CACNB3P54284 484 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 ATP2B3Q16720 1220 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 FKBP1CQ5VVH2 108 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 HHIPL2Q6UWX4 724 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 ANKRD13AQ8IZ07 590 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 SIL1Q9H173 461 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 CEP126Q9P2H0 1117 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 PA2G4Q9UQ80 394 aaKnown RBP9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 HDAC5Q9UQL6 1122 aa9.13□□□□□ -0.95
CACNA1A-222ENST00000636022 MAST3O60307 1309 aa9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 TESPA1A2RU30 521 aaPredicted RBP9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 ALDH1A1P00352 501 aa9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 TNNI2P48788 182 aa9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 MTX1Q13505 466 aa9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 PKN2Q16513 984 aaKnown RBP9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 FAM83AQ86UY5 434 aa9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 WDR66Q8TBY9 1149 aa9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 PTPN18Q99952 460 aa9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 KIAA0100Q14667 2235 aaKnown RBP9.12□□□□□ -0.95
CACNA1A-222ENST00000636022 FKTNO75072 461 aa9.11□□□□□ -0.95
CACNA1A-222ENST00000636022 BCAR3O75815 825 aa9.11□□□□□ -0.95
CACNA1A-222ENST00000636022 GNAI3P08754 354 aa9.11□□□□□ -0.95
CACNA1A-222ENST00000636022 TRIM27P14373 513 aa9.11□□□□□ -0.95
CACNA1A-222ENST00000636022 PHKA1P46020 1223 aa9.11□□□□□ -0.95
CACNA1A-222ENST00000636022 MAP3K9P80192 1104 aa9.11□□□□□ -0.95
CACNA1A-222ENST00000636022 MLLT1Q03111 559 aaPredicted RBP9.11□□□□□ -0.95
CACNA1A-222ENST00000636022 VGLL4Q14135 290 aa9.11□□□□□ -0.95
CACNA1A-222ENST00000636022 OPTNQ96CV9 577 aa9.11□□□□□ -0.95
CACNA1A-222ENST00000636022 MS4A4AQ96JQ5 239 aa9.11□□□□□ -0.95
CACNA1A-222ENST00000636022 ELP3Q9H9T3 547 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms