RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 TDRD3Q9H7E2 651 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-219ENST00000629378 TTF2Q9UNY4 1162 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-219ENST00000629378 COG6Q9Y2V7 657 aa11.3□□□□□ -0.6
SPTAN1-219ENST00000629378 SSC5DA1L4H1 1573 aa11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 USP2O75604 605 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 PDE8BO95263 885 aa11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 RLBP1P12271 317 aa11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 TRIM27P14373 513 aa11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 TM4SF4P48230 202 aa11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 RFX5P48382 616 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 RASA3Q14644 834 aa11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 FTSJ3Q8IY81 847 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 ARHGAP45Q92619 1136 aa11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 ZNF70Q9UC06 446 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-219ENST00000629378 MYO1BO43795 1136 aa11.28□□□□□ -0.6
SPTAN1-219ENST00000629378 CRKP46108 304 aa11.28□□□□□ -0.6
SPTAN1-219ENST00000629378 SPRYD7Q5W111 196 aa11.28□□□□□ -0.6
SPTAN1-219ENST00000629378 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
SPTAN1-219ENST00000629378 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
SPTAN1-219ENST00000629378 SLC10A4Q96EP9 437 aa11.28□□□□□ -0.6
SPTAN1-219ENST00000629378 TCP10L2B9ZVM9 353 aa11.27□□□□□ -0.61
SPTAN1-219ENST00000629378 FRAT2O75474 233 aaPredicted RBP11.27□□□□□ -0.61
SPTAN1-219ENST00000629378 FGFR2P21802 821 aa11.27□□□□□ -0.61
SPTAN1-219ENST00000629378 CACNB3P54284 484 aa11.27□□□□□ -0.61
SPTAN1-219ENST00000629378 MVPQ14764 893 aaKnown RBP11.27□□□□□ -0.61
SPTAN1-219ENST00000629378 SPDYE2Q495Y8 402 aa11.27□□□□□ -0.61
SPTAN1-219ENST00000629378 ATG9AQ7Z3C6 839 aa11.27□□□□□ -0.61
SPTAN1-219ENST00000629378 SIL1Q9H173 461 aa11.27□□□□□ -0.61
SPTAN1-219ENST00000629378 ARAP2Q8WZ64 1704 aa11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 EYA2O00167 538 aa11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 GJA5P36382 358 aa11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 SUPT20HL1Q3ZLR7 823 aa11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 CAVIN4Q5BKX8 364 aa11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 ZNF296Q8WUU4 475 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 WNK4Q96J92 1243 aa11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 TEPSINQ96N21 525 aa11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 TMEM39BQ9GZU3 492 aa11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 SERPINA10Q9UK55 444 aa11.26□□□□□ -0.61
SPTAN1-219ENST00000629378 COL1A1P02452 1464 aaPredicted RBP11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 PPP1R12BO60237 982 aaPredicted RBP11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 UBTFL1P0CB47 393 aaPredicted RBP11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 RGS19P49795 217 aa11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 AAMPQ13685 434 aa11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 TMEM57Q8N5G2 664 aa11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 PA2G4Q9UQ80 394 aaKnown RBP11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 PPP2R3BQ9Y5P8 575 aa11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 LRRFIP2Q9Y608 721 aaKnown RBP11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 MYH13Q9UKX3 1938 aa11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 OTOFQ9HC10 1997 aa11.25□□□□□ -0.61
SPTAN1-219ENST00000629378 GPR25O00155 361 aa11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 IGF2BP3O00425 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 IFIT1P09914 478 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 SOX10P56693 466 aa11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 SREBF2Q12772 1141 aa11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 PUM3Q15397 648 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 CTU1Q7Z7A3 348 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 ITPRIPQ8IWB1 547 aa11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 CNKSR2Q8WXI2 1034 aa11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 MEIS3Q99687 375 aa11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 ELP3Q9H9T3 547 aa11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 TNRC18O15417 2968 aaPredicted RBP11.24□□□□□ -0.61
SPTAN1-219ENST00000629378 SLC5A1P13866 664 aa11.23□□□□□ -0.61
SPTAN1-219ENST00000629378 IREB2P48200 963 aaKnown RBP11.23□□□□□ -0.61
SPTAN1-219ENST00000629378 MLLT1Q03111 559 aaPredicted RBP11.23□□□□□ -0.61
SPTAN1-219ENST00000629378 APOBEC3HQ6NTF7 200 aaKnown RBP11.23□□□□□ -0.61
SPTAN1-219ENST00000629378 IFNL1Q8IU54 200 aa11.23□□□□□ -0.61
SPTAN1-219ENST00000629378 DDX19BQ9UMR2 479 aa11.23□□□□□ -0.61
SPTAN1-219ENST00000629378 MANSC4A6NHS7 340 aaPredicted RBP11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 ADORA1P30542 326 aa11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 ANKRD13AQ8IZ07 590 aa11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 TBC1D22AQ8WUA7 517 aa11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 LPIN2Q92539 896 aa11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 TEKT1Q969V4 418 aa11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 OPTNQ96CV9 577 aa11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 PTPN18Q99952 460 aa11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 HPS5Q9UPZ3 1129 aa11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.22□□□□□ -0.61
SPTAN1-219ENST00000629378 AK9Q5TCS8 1911 aa11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 FKTNO75072 461 aa11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 ZBTB48P10074 688 aaPredicted RBP11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 PHKA1P46020 1223 aa11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 TIMM10P62072 90 aa11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 HDLBPQ00341 1268 aaKnown RBP11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 TNFAIP1Q13829 316 aa11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 ATP2B3Q16720 1220 aa11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 ZDHHC15Q96MV8 337 aa11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 CEP126Q9P2H0 1117 aa11.21□□□□□ -0.61
SPTAN1-219ENST00000629378 LAMB1P07942 1786 aa11.21□□□□□ -0.62
SPTAN1-219ENST00000629378 CIAO1O76071 339 aa11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 TNNI2P48788 182 aa11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 INHBEP58166 350 aa11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 MAP3K9P80192 1104 aa11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 CAP1Q01518 475 aa11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 VGLL4Q14135 290 aa11.2□□□□□ -0.62
SPTAN1-219ENST00000629378 INTS3Q68E01 1043 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms