RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 LRRC3Q9BY71 257 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 PBX4Q9BYU1 374 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 CEP44Q9C0F1 390 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 STK17AQ9UEE5 414 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 DACH1Q9UI36 760 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 NAGPAQ9UK23 515 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 MAPK8IP1Q9UQF2 711 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 LEMD3Q9Y2U8 911 aa5.5□□□□□ -1.53
LRRC39-204ENST00000620882 U2SURPO15042 1029 aaKnown RBP5.49□□□□□ -1.53
LRRC39-204ENST00000620882 GRIN3BO60391 1043 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 MAN1A2O60476 641 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 CILPO75339 1184 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.49□□□□□ -1.53
LRRC39-204ENST00000620882 VN1R5Q7Z5H4 357 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 LSRQ86X29 649 aaPredicted RBP5.49□□□□□ -1.53
LRRC39-204ENST00000620882 TRPM4Q8TD43 1214 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 POLR3KQ9Y2Y1 108 aaPredicted RBP5.49□□□□□ -1.53
LRRC39-204ENST00000620882 hCG_2014768A0A024R1R8 64 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 SLC35F4A4IF30 521 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 GPR25O00155 361 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 ST8SIA5O15466 376 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 NRLP54845 237 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 EIF6P56537 245 aaKnown RBP5.49□□□□□ -1.53
LRRC39-204ENST00000620882 RPS26P62854 115 aaKnown RBP5.49□□□□□ -1.53
LRRC39-204ENST00000620882 PLEKHG4Q58EX7 1191 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 FIGNL1Q6PIW4 674 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 TMEM39AQ9NV64 488 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 ZNRF3Q9ULT6 936 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 COL4A3BPQ9Y5P4 624 aa5.49□□□□□ -1.53
LRRC39-204ENST00000620882 LOC102724428A0A0B4J2F2 783 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 MARCH6O60337 910 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 SIK1P57059 783 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 GPLD1P80108 840 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 CTBSQ01459 385 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 TBC1D8BQ0IIM8 1120 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 LARP1BQ659C4 914 aaKnown RBP5.48□□□□□ -1.53
LRRC39-204ENST00000620882 HGSNATQ68CP4 663 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 MRM1Q6IN84 353 aaKnown RBP5.48□□□□□ -1.53
LRRC39-204ENST00000620882 SPATC1Q76KD6 591 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 STAG1Q8WVM7 1258 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 GTPBP3Q969Y2 492 aaKnown RBP5.48□□□□□ -1.53
LRRC39-204ENST00000620882 ZNF837Q96EG3 531 aaPredicted RBP5.48□□□□□ -1.53
LRRC39-204ENST00000620882 FERD3LQ96RJ6 166 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 MIR1-1HGQ9H1L0 117 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 PCDH12Q9NPG4 1184 aa5.48□□□□□ -1.53
LRRC39-204ENST00000620882 DIAPH1O60610 1272 aaKnown RBP5.47□□□□□ -1.53
LRRC39-204ENST00000620882 CDC45O75419 566 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 B3GALT4O96024 378 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 CHMP4BP1P59074 171 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 CEP135Q66GS9 1140 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 CLEC4MQ9H2X3 399 aaPredicted RBP5.47□□□□□ -1.53
LRRC39-204ENST00000620882 ACTR10Q9NZ32 417 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 GJB6O95452 261 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 ECEL1O95672 775 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 EIF2AK2P19525 551 aaKnown RBP5.47□□□□□ -1.53
LRRC39-204ENST00000620882 AMPD3Q01432 767 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 MPP2Q14168 576 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 CWF19L2Q2TBE0 894 aaKnown RBP5.47□□□□□ -1.53
LRRC39-204ENST00000620882 SULF2Q8IWU5 870 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 DNAJB12Q9NXW2 375 aaKnown RBP5.47□□□□□ -1.53
LRRC39-204ENST00000620882 PFDN2Q9UHV9 154 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 TRIM33Q9UPN9 1127 aa5.47□□□□□ -1.53
LRRC39-204ENST00000620882 C2CD2LO14523 706 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 PDPK1O15530 556 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 CPB1P15086 417 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 PCDH1Q08174 1060 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 LAMC2Q13753 1193 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 LBRQ14739 615 aaKnown RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 PDZD3Q86UT5 571 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 CCDC155Q8N6L0 562 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 BSNDQ8WZ55 320 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 LACRTQ9GZZ8 138 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 SOX13Q9UN79 622 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 NOP58Q9Y2X3 529 aaKnown RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 R3HCC1Q9Y3T6 440 aaKnown RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 PCDHB14Q9Y5E9 798 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 UPK3BL1B0FP48 263 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 UPK3BL2E5RIL1 263 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 PCBP4P57723 403 aaKnown RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 IGBP1P78318 339 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 ZNF252P-AS1Q0IIN9 211 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 ZYXQ15942 572 aaKnown RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 PPP2R5EQ16537 467 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 TNNI3KQ59H18 835 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 RPS26P11Q5JNZ5 115 aaPredicted RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 C6orf15Q6UXA7 325 aaPredicted RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 KIAA0907Q7Z7F0 614 aaPredicted RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 SYT9Q86SS6 491 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 TRIM22Q8IYM9 498 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 FAM126AQ9BYI3 521 aaPredicted RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 ZC3H12CQ9C0D7 883 aaKnown RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 CBX8Q9HC52 389 aa5.46□□□□□ -1.54
LRRC39-204ENST00000620882 SH2B1Q9NRF2 756 aaPredicted RBP5.46□□□□□ -1.54
LRRC39-204ENST00000620882 DNAJA2O60884 412 aa5.45□□□□□ -1.54
LRRC39-204ENST00000620882 NME2P22392 152 aa5.45□□□□□ -1.54
LRRC39-204ENST00000620882 FGFR3P22607 806 aa5.45□□□□□ -1.54
LRRC39-204ENST00000620882 PERM1Q5SV97 790 aa5.45□□□□□ -1.54
LRRC39-204ENST00000620882 RNF187Q5TA31 235 aaPredicted RBP5.45□□□□□ -1.54
LRRC39-204ENST00000620882 LLGL2Q6P1M3 1020 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms