RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 SPDYE5A6NIY4 337 aa19.87■□□□□ 0.77
LIG1-214ENST00000597146 NEURL1BA8MQ27 555 aa19.87■□□□□ 0.77
LIG1-214ENST00000597146 TCP10L2B9ZVM9 353 aa19.87■□□□□ 0.77
LIG1-214ENST00000597146 WDHD1O75717 1129 aaPredicted RBP19.87■□□□□ 0.77
LIG1-214ENST00000597146 GRK4P32298 578 aa19.87■□□□□ 0.77
LIG1-214ENST00000597146 FKBP1AP62942 108 aaKnown RBP19.87■□□□□ 0.77
LIG1-214ENST00000597146 ZNF804AQ7Z570 1209 aa19.87■□□□□ 0.77
LIG1-214ENST00000597146 TRIM47Q96LD4 638 aa19.87■□□□□ 0.77
LIG1-214ENST00000597146 SRRDQ9UH36 339 aa19.87■□□□□ 0.77
LIG1-214ENST00000597146 SNCAIPQ9Y6H5 919 aa19.87■□□□□ 0.77
LIG1-214ENST00000597146 A0A1W2PPC1 479 aa19.86■□□□□ 0.77
LIG1-214ENST00000597146 FARP2O94887 1054 aaPredicted RBP19.86■□□□□ 0.77
LIG1-214ENST00000597146 GJB1P08034 283 aa19.86■□□□□ 0.77
LIG1-214ENST00000597146 ZNF853P0CG23 659 aa19.86■□□□□ 0.77
LIG1-214ENST00000597146 CETPP11597 493 aa19.86■□□□□ 0.77
LIG1-214ENST00000597146 OSBPP22059 807 aa19.86■□□□□ 0.77
LIG1-214ENST00000597146 KSR2Q6VAB6 950 aa19.86■□□□□ 0.77
LIG1-214ENST00000597146 C15orf52Q6ZUT6 534 aaKnown RBP19.86■□□□□ 0.77
LIG1-214ENST00000597146 C8orf58Q8NAV2 365 aa19.86■□□□□ 0.77
LIG1-214ENST00000597146 RNF208Q9H0X6 261 aa19.86■□□□□ 0.77
LIG1-214ENST00000597146 CPA4Q9UI42 421 aa19.86■□□□□ 0.77
LIG1-214ENST00000597146 RIPOR2Q9Y4F9 1068 aa19.86■□□□□ 0.77
LIG1-214ENST00000597146 MYPNQ86TC9 1320 aa19.85■□□□□ 0.77
LIG1-214ENST00000597146 H7C1W4 665 aa19.85■□□□□ 0.77
LIG1-214ENST00000597146 PSMC4P43686 418 aa19.85■□□□□ 0.77
LIG1-214ENST00000597146 RAET1EQ8TD07 263 aa19.85■□□□□ 0.77
LIG1-214ENST00000597146 IRF6O14896 467 aa19.84■□□□□ 0.77
LIG1-214ENST00000597146 NEXNQ0ZGT2 675 aa19.84■□□□□ 0.77
LIG1-214ENST00000597146 C17orf99Q6UX52 265 aa19.84■□□□□ 0.77
LIG1-214ENST00000597146 ZCCHC17Q9NP64 241 aaKnown RBP19.84■□□□□ 0.77
LIG1-214ENST00000597146 STAP2Q9UGK3 403 aa19.84■□□□□ 0.77
LIG1-214ENST00000597146 RALBP1Q15311 655 aa19.83■□□□□ 0.77
LIG1-214ENST00000597146 U2AF1L4Q8WU68 220 aaKnown RBP19.83■□□□□ 0.77
LIG1-214ENST00000597146 PLA2G12BQ9BX93 195 aa19.83■□□□□ 0.77
LIG1-214ENST00000597146 TTF2Q9UNY4 1162 aaKnown RBP19.83■□□□□ 0.77
LIG1-214ENST00000597146 ADGRA2Q96PE1 1338 aa19.82■□□□□ 0.76
LIG1-214ENST00000597146 EVI5O60447 810 aa19.82■□□□□ 0.76
LIG1-214ENST00000597146 FMNL1O95466 1100 aaPredicted RBP19.82■□□□□ 0.76
LIG1-214ENST00000597146 SNAPC2Q13487 334 aa19.82■□□□□ 0.76
LIG1-214ENST00000597146 CCDC30Q5VVM6 783 aa19.82■□□□□ 0.76
LIG1-214ENST00000597146 Q7L0L9 218 aa19.82■□□□□ 0.76
LIG1-214ENST00000597146 ERO1BQ86YB8 467 aa19.82■□□□□ 0.76
LIG1-214ENST00000597146 DZIP1LQ8IYY4 767 aaKnown RBP19.82■□□□□ 0.76
LIG1-214ENST00000597146 ZKSCAN4Q969J2 545 aaPredicted RBP19.82■□□□□ 0.76
LIG1-214ENST00000597146 UNC93B1Q9H1C4 597 aa19.82■□□□□ 0.76
LIG1-214ENST00000597146 BIN2Q9UBW5 565 aaPredicted RBP19.82■□□□□ 0.76
LIG1-214ENST00000597146 CSF1RP07333 972 aa19.81■□□□□ 0.76
LIG1-214ENST00000597146 CASP7P55210 303 aa19.81■□□□□ 0.76
LIG1-214ENST00000597146 PRKCZQ05513 592 aa19.81■□□□□ 0.76
LIG1-214ENST00000597146 MFSD14BQ5SR56 506 aa19.81■□□□□ 0.76
LIG1-214ENST00000597146 WRNIP1Q96S55 665 aa19.81■□□□□ 0.76
LIG1-214ENST00000597146 IFT57Q9NWB7 429 aa19.81■□□□□ 0.76
LIG1-214ENST00000597146 SERPINA10Q9UK55 444 aa19.81■□□□□ 0.76
LIG1-214ENST00000597146 ANKRD18BA2A2Z9 1011 aa19.8■□□□□ 0.76
LIG1-214ENST00000597146 TNNI2P48788 182 aa19.8■□□□□ 0.76
LIG1-214ENST00000597146 CACNB3P54284 484 aa19.8■□□□□ 0.76
LIG1-214ENST00000597146 PPIL2Q13356 520 aa19.8■□□□□ 0.76
LIG1-214ENST00000597146 TSPYL6Q8N831 410 aa19.8■□□□□ 0.76
LIG1-214ENST00000597146 FAM205AQ6ZU69 1335 aa19.79■□□□□ 0.76
LIG1-214ENST00000597146 HOXD10P28358 340 aa19.79■□□□□ 0.76
LIG1-214ENST00000597146 CRKP46108 304 aa19.79■□□□□ 0.76
LIG1-214ENST00000597146 GNAI1P63096 354 aa19.79■□□□□ 0.76
LIG1-214ENST00000597146 UBXN2AP68543 259 aa19.79■□□□□ 0.76
LIG1-214ENST00000597146 GCKRQ14397 625 aa19.79■□□□□ 0.76
LIG1-214ENST00000597146 G2E3Q7L622 706 aa19.79■□□□□ 0.76
LIG1-214ENST00000597146 DEFB123Q8N688 67 aa19.79■□□□□ 0.76
LIG1-214ENST00000597146 WDR43Q15061 677 aaKnown RBP eCLIP19.78■□□□□ 0.76
LIG1-214ENST00000597146 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.78■□□□□ 0.76
LIG1-214ENST00000597146 COL25A1Q9BXS0 654 aaPredicted RBP19.78■□□□□ 0.76
LIG1-214ENST00000597146 PDHXO00330 501 aa19.77■□□□□ 0.76
LIG1-214ENST00000597146 PLIN1O60240 522 aa19.77■□□□□ 0.76
LIG1-214ENST00000597146 SGPL1O95470 568 aa19.77■□□□□ 0.76
LIG1-214ENST00000597146 GRIK5Q16478 980 aa19.77■□□□□ 0.76
LIG1-214ENST00000597146 GABRQQ9UN88 632 aa19.77■□□□□ 0.76
LIG1-214ENST00000597146 ADAMTS8Q9UP79 889 aa19.77■□□□□ 0.76
LIG1-214ENST00000597146 VCANP13611 3396 aa19.77■□□□□ 0.76
LIG1-214ENST00000597146 AK9Q5TCS8 1911 aa19.76■□□□□ 0.75
LIG1-214ENST00000597146 ANKRD23Q86SG2 305 aa19.76■□□□□ 0.75
LIG1-214ENST00000597146 CHMP3Q9Y3E7 222 aa19.76■□□□□ 0.75
LIG1-214ENST00000597146 GYG1P46976 350 aa19.75■□□□□ 0.75
LIG1-214ENST00000597146 SLAIN1Q8ND83 568 aa19.75■□□□□ 0.75
LIG1-214ENST00000597146 TDRD7Q8NHU6 1098 aaKnown RBP19.75■□□□□ 0.75
LIG1-214ENST00000597146 STXBP5LQ9Y2K9 1186 aa19.75■□□□□ 0.75
LIG1-214ENST00000597146 DOCK3Q8IZD9 2030 aa19.75■□□□□ 0.75
LIG1-214ENST00000597146 ELNP15502 786 aa19.74■□□□□ 0.75
LIG1-214ENST00000597146 INPP5BP32019 993 aa19.74■□□□□ 0.75
LIG1-214ENST00000597146 IFIT5Q13325 482 aaKnown RBP19.74■□□□□ 0.75
LIG1-214ENST00000597146 ZNF594Q96JF6 807 aaPredicted RBP19.74■□□□□ 0.75
LIG1-214ENST00000597146 DEFB118Q96PH6 123 aa19.74■□□□□ 0.75
LIG1-214ENST00000597146 GDF15Q99988 308 aa19.74■□□□□ 0.75
LIG1-214ENST00000597146 INHAP05111 366 aa19.73■□□□□ 0.75
LIG1-214ENST00000597146 FCGRTP55899 365 aa19.73■□□□□ 0.75
LIG1-214ENST00000597146 PPATQ06203 517 aa19.73■□□□□ 0.75
LIG1-214ENST00000597146 MOGSQ13724 837 aa19.73■□□□□ 0.75
LIG1-214ENST00000597146 GPR153Q6NV75 609 aa19.73■□□□□ 0.75
LIG1-214ENST00000597146 DIS3LQ8TF46 1054 aaKnown RBP19.73■□□□□ 0.75
LIG1-214ENST00000597146 STK31Q9BXU1 1019 aa19.73■□□□□ 0.75
LIG1-214ENST00000597146 ZMYND8Q9ULU4 1186 aaPredicted RBP19.73■□□□□ 0.75
LIG1-214ENST00000597146 DDX60LQ5H9U9 1706 aaKnown RBP19.73■□□□□ 0.75
LIG1-214ENST00000597146 PTPRFP10586 1907 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms