RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 DEFB129Q9H1M3 183 aa21.03■□□□□ 0.96
LTBP4-209ENST00000594116 F8W031 263 aaPredicted RBP21.02■□□□□ 0.96
LTBP4-209ENST00000594116 HMMRO75330 724 aa21.02■□□□□ 0.96
LTBP4-209ENST00000594116 HIBADHP31937 336 aaKnown RBP21.02■□□□□ 0.96
LTBP4-209ENST00000594116 FAM84BQ96KN1 310 aaPredicted RBP21.02■□□□□ 0.96
LTBP4-209ENST00000594116 JAG2Q9Y219 1238 aa21.02■□□□□ 0.96
LTBP4-209ENST00000594116 PCDHAC2Q9Y5I4 1007 aa21.02■□□□□ 0.96
LTBP4-209ENST00000594116 LAMB1P07942 1786 aa21.02■□□□□ 0.96
LTBP4-209ENST00000594116 SSC5DA1L4H1 1573 aa21.02■□□□□ 0.95
LTBP4-209ENST00000594116 GYG1P46976 350 aa21.01■□□□□ 0.95
LTBP4-209ENST00000594116 PTPN12Q05209 780 aaKnown RBP21.01■□□□□ 0.95
LTBP4-209ENST00000594116 HDAC1Q13547 482 aaPredicted RBP21.01■□□□□ 0.95
LTBP4-209ENST00000594116 LDLRAD1Q5T700 205 aa21.01■□□□□ 0.95
LTBP4-209ENST00000594116 COPRSQ9NQ92 184 aa21.01■□□□□ 0.95
LTBP4-209ENST00000594116 TM4SF4P48230 202 aa21■□□□□ 0.95
LTBP4-209ENST00000594116 MFSD14BQ5SR56 506 aa21■□□□□ 0.95
LTBP4-209ENST00000594116 PRMT6Q96LA8 375 aaPredicted RBP21■□□□□ 0.95
LTBP4-209ENST00000594116 PRKG1Q13976 671 aa20.99■□□□□ 0.95
LTBP4-209ENST00000594116 MAP3K11Q16584 847 aa20.99■□□□□ 0.95
LTBP4-209ENST00000594116 VGLL2Q8N8G2 317 aa20.99■□□□□ 0.95
LTBP4-209ENST00000594116 SERPINA10Q9UK55 444 aa20.99■□□□□ 0.95
LTBP4-209ENST00000594116 ANGEL1Q9UNK9 670 aaKnown RBP20.99■□□□□ 0.95
LTBP4-209ENST00000594116 NOP58Q9Y2X3 529 aaKnown RBP20.99■□□□□ 0.95
LTBP4-209ENST00000594116 CLRN2A0PK11 232 aa20.98■□□□□ 0.95
LTBP4-209ENST00000594116 RGS19P49795 217 aa20.98■□□□□ 0.95
LTBP4-209ENST00000594116 SREBF2Q12772 1141 aa20.98■□□□□ 0.95
LTBP4-209ENST00000594116 LRRC24Q50LG9 513 aa20.98■□□□□ 0.95
LTBP4-209ENST00000594116 KLHDC4Q8TBB5 520 aa20.98■□□□□ 0.95
LTBP4-209ENST00000594116 FBXO3Q9UK99 471 aa20.98■□□□□ 0.95
LTBP4-209ENST00000594116 AOX1Q06278 1338 aa20.98■□□□□ 0.95
LTBP4-209ENST00000594116 PDE8BO95263 885 aa20.97■□□□□ 0.95
LTBP4-209ENST00000594116 RBM5P52756 815 aaKnown RBP eCLIP20.97■□□□□ 0.95
LTBP4-209ENST00000594116 METTL24Q5JXM2 366 aa20.97■□□□□ 0.95
LTBP4-209ENST00000594116 FBXO33Q7Z6M2 555 aa20.97■□□□□ 0.95
LTBP4-209ENST00000594116 TTF2Q9UNY4 1162 aaKnown RBP20.97■□□□□ 0.95
LTBP4-209ENST00000594116 PA2G4Q9UQ80 394 aaKnown RBP20.97■□□□□ 0.95
LTBP4-209ENST00000594116 UNCXA6NJT0 531 aa20.96■□□□□ 0.95
LTBP4-209ENST00000594116 PPP1R12BO60237 982 aaPredicted RBP20.96■□□□□ 0.95
LTBP4-209ENST00000594116 CIAO1O76071 339 aa20.96■□□□□ 0.95
LTBP4-209ENST00000594116 SUPT20HL1Q3ZLR7 823 aa20.96■□□□□ 0.95
LTBP4-209ENST00000594116 SPRYD7Q5W111 196 aa20.96■□□□□ 0.95
LTBP4-209ENST00000594116 VPS37DQ86XT2 251 aa20.96■□□□□ 0.95
LTBP4-209ENST00000594116 RWDD1Q9H446 243 aaPredicted RBP20.96■□□□□ 0.95
LTBP4-209ENST00000594116 VEZTQ9HBM0 779 aa20.96■□□□□ 0.95
LTBP4-209ENST00000594116 EYA2O00167 538 aa20.95■□□□□ 0.94
LTBP4-209ENST00000594116 MKRN3Q13064 507 aaKnown RBP20.95■□□□□ 0.94
LTBP4-209ENST00000594116 TNFAIP1Q13829 316 aa20.95■□□□□ 0.94
LTBP4-209ENST00000594116 SPDYE2Q495Y8 402 aa20.95■□□□□ 0.94
LTBP4-209ENST00000594116 CAVIN4Q5BKX8 364 aa20.95■□□□□ 0.94
LTBP4-209ENST00000594116 NOM1Q5C9Z4 860 aaKnown RBP20.95■□□□□ 0.94
LTBP4-209ENST00000594116 CTU1Q7Z7A3 348 aaKnown RBP20.95■□□□□ 0.94
LTBP4-209ENST00000594116 CFHR5Q9BXR6 569 aa20.95■□□□□ 0.94
LTBP4-209ENST00000594116 DCTPP1Q9H773 170 aa20.95■□□□□ 0.94
LTBP4-209ENST00000594116 PPP4R2Q9NY27 417 aa20.95■□□□□ 0.94
LTBP4-209ENST00000594116 FZD1Q9UP38 647 aa20.95■□□□□ 0.94
LTBP4-209ENST00000594116 OTOFQ9HC10 1997 aa20.94■□□□□ 0.94
LTBP4-209ENST00000594116 IGHDP01880 384 aa20.94■□□□□ 0.94
LTBP4-209ENST00000594116 RASA3Q14644 834 aa20.94■□□□□ 0.94
LTBP4-209ENST00000594116 TBC1D22AQ8WUA7 517 aa20.94■□□□□ 0.94
LTBP4-209ENST00000594116 MYH13Q9UKX3 1938 aa20.94■□□□□ 0.94
LTBP4-209ENST00000594116 SURF6O75683 361 aaKnown RBP20.93■□□□□ 0.94
LTBP4-209ENST00000594116 TBC1D8O95759 1140 aa20.93■□□□□ 0.94
LTBP4-209ENST00000594116 ZBTB48P10074 688 aaPredicted RBP20.93■□□□□ 0.94
LTBP4-209ENST00000594116 NBPF12Q5TAG4 269 aaPredicted RBP20.93■□□□□ 0.94
LTBP4-209ENST00000594116 ATG9AQ7Z3C6 839 aa20.93■□□□□ 0.94
LTBP4-209ENST00000594116 SLC10A4Q96EP9 437 aa20.93■□□□□ 0.94
LTBP4-209ENST00000594116 ZNF70Q9UC06 446 aaPredicted RBP20.93■□□□□ 0.94
LTBP4-209ENST00000594116 FGFR2P21802 821 aa20.92■□□□□ 0.94
LTBP4-209ENST00000594116 CRKP46108 304 aa20.92■□□□□ 0.94
LTBP4-209ENST00000594116 HDLBPQ00341 1268 aaKnown RBP20.92■□□□□ 0.94
LTBP4-209ENST00000594116 MLLT1Q03111 559 aaPredicted RBP20.92■□□□□ 0.94
LTBP4-209ENST00000594116 PUM3Q15397 648 aaKnown RBP20.92■□□□□ 0.94
LTBP4-209ENST00000594116 ZNF296Q8WUU4 475 aaPredicted RBP20.92■□□□□ 0.94
LTBP4-209ENST00000594116 SIL1Q9H173 461 aa20.92■□□□□ 0.94
LTBP4-209ENST00000594116 TDRD3Q9H7E2 651 aaKnown RBP20.92■□□□□ 0.94
LTBP4-209ENST00000594116 IQSEC3Q9UPP2 1182 aaPredicted RBP20.92■□□□□ 0.94
LTBP4-209ENST00000594116 EXOC6BQ9Y2D4 811 aa20.92■□□□□ 0.94
LTBP4-209ENST00000594116 MANSC4A6NHS7 340 aaPredicted RBP20.91■□□□□ 0.94
LTBP4-209ENST00000594116 FRAT2O75474 233 aaPredicted RBP20.91■□□□□ 0.94
LTBP4-209ENST00000594116 IL15P40933 162 aaPredicted RBP20.91■□□□□ 0.94
LTBP4-209ENST00000594116 IREB2P48200 963 aaKnown RBP20.91■□□□□ 0.94
LTBP4-209ENST00000594116 INHBEP58166 350 aa20.91■□□□□ 0.94
LTBP4-209ENST00000594116 G3BP1Q13283 466 aaKnown RBP eCLIP20.91■□□□□ 0.94
LTBP4-209ENST00000594116 HSP90AB4PQ58FF6 505 aa20.91■□□□□ 0.94
LTBP4-209ENST00000594116 SMC5Q8IY18 1101 aa20.91■□□□□ 0.94
LTBP4-209ENST00000594116 GCC1Q96CN9 775 aa20.91■□□□□ 0.94
LTBP4-209ENST00000594116 WNK4Q96J92 1243 aa20.91■□□□□ 0.94
LTBP4-209ENST00000594116 CLMNQ96JQ2 1002 aa20.91■□□□□ 0.94
LTBP4-209ENST00000594116 GPR25O00155 361 aa20.9■□□□□ 0.94
LTBP4-209ENST00000594116 ALDH1A1P00352 501 aa20.9■□□□□ 0.94
LTBP4-209ENST00000594116 IFIT1P09914 478 aaKnown RBP20.9■□□□□ 0.94
LTBP4-209ENST00000594116 CHAF1AQ13111 956 aaPredicted RBP20.9■□□□□ 0.94
LTBP4-209ENST00000594116 GRIK5Q16478 980 aa20.9■□□□□ 0.94
LTBP4-209ENST00000594116 CCDC136Q96JN2 1154 aa20.9■□□□□ 0.94
LTBP4-209ENST00000594116 RAB11FIP3O75154 756 aa20.89■□□□□ 0.93
LTBP4-209ENST00000594116 USP2O75604 605 aaPredicted RBP20.89■□□□□ 0.93
LTBP4-209ENST00000594116 BCAMP50895 628 aa20.89■□□□□ 0.93
LTBP4-209ENST00000594116 PKN2Q16513 984 aaKnown RBP20.89■□□□□ 0.93
LTBP4-209ENST00000594116 ERC1Q8IUD2 1116 aa20.89■□□□□ 0.93
LTBP4-209ENST00000594116 ANKRD13AQ8IZ07 590 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms