RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 TDRD7Q8NHU6 1098 aaKnown RBP30.86■■■□□ 2.53
TSEN54-209ENST00000583454 SIL1Q9H173 461 aa30.86■■■□□ 2.53
TSEN54-209ENST00000583454 DEFB129Q9H1M3 183 aa30.86■■■□□ 2.53
TSEN54-209ENST00000583454 POLA2Q14181 598 aa30.85■■■□□ 2.53
TSEN54-209ENST00000583454 FAM84BQ96KN1 310 aaPredicted RBP30.85■■■□□ 2.53
TSEN54-209ENST00000583454 PRMT6Q96LA8 375 aaPredicted RBP30.85■■■□□ 2.53
TSEN54-209ENST00000583454 ZBTB40Q9NUA8 1239 aa30.85■■■□□ 2.53
TSEN54-209ENST00000583454 FZD1Q9UP38 647 aa30.85■■■□□ 2.53
TSEN54-209ENST00000583454 IL15P40933 162 aaPredicted RBP30.84■■■□□ 2.53
TSEN54-209ENST00000583454 GYG1P46976 350 aa30.84■■■□□ 2.53
TSEN54-209ENST00000583454 PRKG1Q13976 671 aa30.84■■■□□ 2.53
TSEN54-209ENST00000583454 SSH3Q8TE77 659 aa30.84■■■□□ 2.53
TSEN54-209ENST00000583454 TM4SF4P48230 202 aa30.83■■■□□ 2.53
TSEN54-209ENST00000583454 RRP1P56182 461 aaKnown RBP30.83■■■□□ 2.53
TSEN54-209ENST00000583454 CHMP4BQ9H444 224 aaKnown RBP30.83■■■□□ 2.53
TSEN54-209ENST00000583454 OTOFQ9HC10 1997 aa30.83■■■□□ 2.53
TSEN54-209ENST00000583454 FGFR2P21802 821 aa30.82■■■□□ 2.52
TSEN54-209ENST00000583454 ARMC9Q7Z3E5 817 aa30.82■■■□□ 2.52
TSEN54-209ENST00000583454 CLRN2A0PK11 232 aa30.81■■■□□ 2.52
TSEN54-209ENST00000583454 HIBADHP31937 336 aaKnown RBP30.81■■■□□ 2.52
TSEN54-209ENST00000583454 MAP3K11Q16584 847 aa30.81■■■□□ 2.52
TSEN54-209ENST00000583454 ANGEL1Q9UNK9 670 aaKnown RBP30.81■■■□□ 2.52
TSEN54-209ENST00000583454 PPP2R3BQ9Y5P8 575 aa30.81■■■□□ 2.52
TSEN54-209ENST00000583454 MKRN3Q13064 507 aaKnown RBP30.8■■■□□ 2.52
TSEN54-209ENST00000583454 PUM3Q15397 648 aaKnown RBP30.8■■■□□ 2.52
TSEN54-209ENST00000583454 CEP85Q6P2H3 762 aa30.8■■■□□ 2.52
TSEN54-209ENST00000583454 CEP126Q9P2H0 1117 aa30.8■■■□□ 2.52
TSEN54-209ENST00000583454 MFSD14BQ5SR56 506 aa30.79■■■□□ 2.52
TSEN54-209ENST00000583454 SPRYD7Q5W111 196 aa30.78■■■□□ 2.52
TSEN54-209ENST00000583454 FBXO33Q7Z6M2 555 aa30.78■■■□□ 2.52
TSEN54-209ENST00000583454 HTTP42858 3142 aa30.76■■■□□ 2.52
TSEN54-209ENST00000583454 MYO1BO43795 1136 aa30.76■■■□□ 2.51
TSEN54-209ENST00000583454 TBC1D8O95759 1140 aa30.76■■■□□ 2.51
TSEN54-209ENST00000583454 GRIK5Q16478 980 aa30.76■■■□□ 2.51
TSEN54-209ENST00000583454 LPIN2Q92539 896 aa30.76■■■□□ 2.51
TSEN54-209ENST00000583454 MYH13Q9UKX3 1938 aa30.75■■■□□ 2.51
TSEN54-209ENST00000583454 IFIT1P09914 478 aaKnown RBP30.75■■■□□ 2.51
TSEN54-209ENST00000583454 NBPF12Q5TAG4 269 aaPredicted RBP30.75■■■□□ 2.51
TSEN54-209ENST00000583454 CTU1Q7Z7A3 348 aaKnown RBP30.75■■■□□ 2.51
TSEN54-209ENST00000583454 CLMNQ96JQ2 1002 aa30.75■■■□□ 2.51
TSEN54-209ENST00000583454 VEZTQ9HBM0 779 aa30.75■■■□□ 2.51
TSEN54-209ENST00000583454 SERPINA10Q9UK55 444 aa30.75■■■□□ 2.51
TSEN54-209ENST00000583454 TTF2Q9UNY4 1162 aaKnown RBP30.75■■■□□ 2.51
TSEN54-209ENST00000583454 G3BP1Q13283 466 aaKnown RBP eCLIP30.74■■■□□ 2.51
TSEN54-209ENST00000583454 SPDYE2Q495Y8 402 aa30.74■■■□□ 2.51
TSEN54-209ENST00000583454 RPAP2Q8IXW5 612 aaPredicted RBP30.74■■■□□ 2.51
TSEN54-209ENST00000583454 ZNF296Q8WUU4 475 aaPredicted RBP30.74■■■□□ 2.51
TSEN54-209ENST00000583454 CFHR5Q9BXR6 569 aa30.74■■■□□ 2.51
TSEN54-209ENST00000583454 NOP58Q9Y2X3 529 aaKnown RBP30.74■■■□□ 2.51
TSEN54-209ENST00000583454 SREBF2Q12772 1141 aa30.73■■■□□ 2.51
TSEN54-209ENST00000583454 RASA3Q14644 834 aa30.73■■■□□ 2.51
TSEN54-209ENST00000583454 ATP2B3Q16720 1220 aa30.73■■■□□ 2.51
TSEN54-209ENST00000583454 NOM1Q5C9Z4 860 aaKnown RBP30.73■■■□□ 2.51
TSEN54-209ENST00000583454 SLC5A1P13866 664 aa30.72■■■□□ 2.51
TSEN54-209ENST00000583454 RBM5P52756 815 aaKnown RBP eCLIP30.72■■■□□ 2.51
TSEN54-209ENST00000583454 MLLT1Q03111 559 aaPredicted RBP30.72■■■□□ 2.51
TSEN54-209ENST00000583454 TFCP2Q12800 502 aa30.72■■■□□ 2.51
TSEN54-209ENST00000583454 R3HDMLQ9H3Y0 253 aa30.72■■■□□ 2.51
TSEN54-209ENST00000583454 ZNF70Q9UC06 446 aaPredicted RBP30.72■■■□□ 2.51
TSEN54-209ENST00000583454 IQSEC3Q9UPP2 1182 aaPredicted RBP30.72■■■□□ 2.51
TSEN54-209ENST00000583454 PPP1R12BO60237 982 aaPredicted RBP30.71■■■□□ 2.51
TSEN54-209ENST00000583454 CAVIN4Q5BKX8 364 aa30.71■■■□□ 2.51
TSEN54-209ENST00000583454 TDRD3Q9H7E2 651 aaKnown RBP30.71■■■□□ 2.51
TSEN54-209ENST00000583454 USP2O75604 605 aaPredicted RBP30.7■■■□□ 2.51
TSEN54-209ENST00000583454 SURF6O75683 361 aaKnown RBP30.7■■■□□ 2.51
TSEN54-209ENST00000583454 SUPT20HL1Q3ZLR7 823 aa30.7■■■□□ 2.51
TSEN54-209ENST00000583454 CDAN1Q8IWY9 1227 aa30.7■■■□□ 2.51
TSEN54-209ENST00000583454 SIRT2Q8IXJ6 389 aa30.7■■■□□ 2.51
TSEN54-209ENST00000583454 WNK4Q96J92 1243 aa30.7■■■□□ 2.51
TSEN54-209ENST00000583454 UNCXA6NJT0 531 aa30.69■■■□□ 2.5
TSEN54-209ENST00000583454 GPR25O00155 361 aa30.69■■■□□ 2.5
TSEN54-209ENST00000583454 CRKP46108 304 aa30.69■■■□□ 2.5
TSEN54-209ENST00000583454 BCAMP50895 628 aa30.69■■■□□ 2.5
TSEN54-209ENST00000583454 SLC10A4Q96EP9 437 aa30.69■■■□□ 2.5
TSEN54-209ENST00000583454 TEPSINQ96N21 525 aa30.69■■■□□ 2.5
TSEN54-209ENST00000583454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.69■■■□□ 2.5
TSEN54-209ENST00000583454 ZBTB48P10074 688 aaPredicted RBP30.68■■■□□ 2.5
TSEN54-209ENST00000583454 VPS37DQ86XT2 251 aa30.68■■■□□ 2.5
TSEN54-209ENST00000583454 AKAP2Q9Y2D5 859 aa30.68■■■□□ 2.5
TSEN54-209ENST00000583454 GJA5P36382 358 aa30.67■■■□□ 2.5
TSEN54-209ENST00000583454 PDE4DIPQ5VU43 2346 aa30.66■■■□□ 2.5
TSEN54-209ENST00000583454 TIMM10P62072 90 aa30.66■■■□□ 2.5
TSEN54-209ENST00000583454 CHAF1AQ13111 956 aaPredicted RBP30.66■■■□□ 2.5
TSEN54-209ENST00000583454 MANSC4A6NHS7 340 aaPredicted RBP30.65■■■□□ 2.5
TSEN54-209ENST00000583454 HMMRO75330 724 aa30.65■■■□□ 2.5
TSEN54-209ENST00000583454 TNFAIP1Q13829 316 aa30.65■■■□□ 2.5
TSEN54-209ENST00000583454 A0A1B0GUL7 405 aa30.64■■■□□ 2.5
TSEN54-209ENST00000583454 IGF2BP3O00425 579 aaKnown RBP eCLIP30.64■■■□□ 2.5
TSEN54-209ENST00000583454 HDLBPQ00341 1268 aaKnown RBP30.64■■■□□ 2.5
TSEN54-209ENST00000583454 OS9Q13438 667 aaPredicted RBP30.64■■■□□ 2.5
TSEN54-209ENST00000583454 IFNL1Q8IU54 200 aa30.64■■■□□ 2.5
TSEN54-209ENST00000583454 TBC1D22AQ8WUA7 517 aa30.64■■■□□ 2.5
TSEN54-209ENST00000583454 GPR108Q9NPR9 543 aa30.64■■■□□ 2.5
TSEN54-209ENST00000583454 ZBTB22O15209 634 aa30.63■■■□□ 2.49
TSEN54-209ENST00000583454 ADORA1P30542 326 aa30.63■■■□□ 2.49
TSEN54-209ENST00000583454 IREB2P48200 963 aaKnown RBP30.63■■■□□ 2.49
TSEN54-209ENST00000583454 HPS5Q9UPZ3 1129 aa30.63■■■□□ 2.49
TSEN54-209ENST00000583454 CENPFP49454 3210 aa30.62■■■□□ 2.49
TSEN54-209ENST00000583454 SOX10P56693 466 aa30.62■■■□□ 2.49
TSEN54-209ENST00000583454 INHBEP58166 350 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms