RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 SAPCD2Q86UD0 394 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 ERC1Q8IUD2 1116 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 RPAP2Q8IXW5 612 aaPredicted RBP8.06□□□□□ -1.12
TRAF4-213ENST00000578917 ZGPATQ8N5A5 531 aaKnown RBP8.06□□□□□ -1.12
TRAF4-213ENST00000578917 MTMR14Q8NCE2 650 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 TDRD3Q9H7E2 651 aaKnown RBP8.06□□□□□ -1.12
TRAF4-213ENST00000578917 SUGT1Q9Y2Z0 365 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 CNTNAP1P78357 1384 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 TCP10L2B9ZVM9 353 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 UBE2Q2LH0YL09 131 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 PPP1R12BO60237 982 aaPredicted RBP8.05□□□□□ -1.12
TRAF4-213ENST00000578917 UQCRFS1P1P0C7P4 283 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 HDLBPQ00341 1268 aaKnown RBP8.05□□□□□ -1.12
TRAF4-213ENST00000578917 MAP2K1Q02750 393 aaPredicted RBP8.05□□□□□ -1.12
TRAF4-213ENST00000578917 C20orf194Q5TEA3 1177 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 ARMC9Q7Z3E5 817 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 DZIP1Q86YF9 867 aaKnown RBP8.05□□□□□ -1.12
TRAF4-213ENST00000578917 SLF2Q8IX21 1173 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 JMYQ8N9B5 988 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 CCDC102AQ96A19 550 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 ZBTB40Q9NUA8 1239 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 ZNF70Q9UC06 446 aaPredicted RBP8.05□□□□□ -1.12
TRAF4-213ENST00000578917 EXOC6BQ9Y2D4 811 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 PCDHAC2Q9Y5I4 1007 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 MYH3P11055 1940 aa8.05□□□□□ -1.12
TRAF4-213ENST00000578917 ZNF609O15014 1411 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 AOC2O75106 756 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 MAP2K2P36507 400 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 FKBP1BP68106 108 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 RASGRF1Q13972 1273 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 RASA3Q14644 834 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 GRIK5Q16478 980 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 TNNI3KQ59H18 835 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 RGMBQ6NW40 437 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 HHIPL2Q6UWX4 724 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 ERICH6Q7L0X2 663 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 SPATA5Q8NB90 893 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 HHIPL1Q96JK4 782 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 MRIQ9BWK5 157 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 CCDC8Q9H0W5 538 aaPredicted RBP8.04□□□□□ -1.12
TRAF4-213ENST00000578917 GPR108Q9NPR9 543 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 SNRKQ9NRH2 765 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 RAI14Q9P0K7 980 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 LRP2BPQ9P2M1 347 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 NOP58Q9Y2X3 529 aaKnown RBP8.04□□□□□ -1.12
TRAF4-213ENST00000578917 PPP2R3BQ9Y5P8 575 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 FPGT-TNNI3KV9GXZ4 949 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 PCNTO95613 3336 aa8.04□□□□□ -1.12
TRAF4-213ENST00000578917 LTBP1Q14766 1721 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 IFIT2P09913 472 aaKnown RBP8.03□□□□□ -1.12
TRAF4-213ENST00000578917 HSPA1AP0DMV8 641 aaKnown RBP8.03□□□□□ -1.12
TRAF4-213ENST00000578917 HSPA1BP0DMV9 641 aaKnown RBP8.03□□□□□ -1.12
TRAF4-213ENST00000578917 PRDX5P30044 214 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 CACNB3P54284 484 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 GSTO1P78417 241 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 NOGQ13253 232 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 DIXDC1Q155Q3 683 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 MOB2Q70IA6 237 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 AACSQ86V21 672 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 CLASRPQ8N2M8 674 aaKnown RBP8.03□□□□□ -1.12
TRAF4-213ENST00000578917 HOOK2Q96ED9 719 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 SLC10A4Q96EP9 437 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 ZBED3Q96IU2 234 aaPredicted RBP8.03□□□□□ -1.12
TRAF4-213ENST00000578917 ZDHHC15Q96MV8 337 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 DBNDD2Q9BQY9 259 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 NOL10Q9BSC4 688 aaKnown RBP8.03□□□□□ -1.12
TRAF4-213ENST00000578917 IL1RAPL2Q9NP60 686 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 USP40Q9NVE5 1235 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 HMG20BQ9P0W2 317 aa8.03□□□□□ -1.12
TRAF4-213ENST00000578917 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
TRAF4-213ENST00000578917 ANGEL1Q9UNK9 670 aaKnown RBP8.03□□□□□ -1.12
TRAF4-213ENST00000578917 SPEF2Q9C093 1822 aa8.02□□□□□ -1.13
TRAF4-213ENST00000578917 RAB11FIP3O75154 756 aa8.02□□□□□ -1.13
TRAF4-213ENST00000578917 LDHCP07864 332 aa8.02□□□□□ -1.13
TRAF4-213ENST00000578917 IREB2P48200 963 aaKnown RBP8.02□□□□□ -1.13
TRAF4-213ENST00000578917 RRP1P56182 461 aaKnown RBP8.02□□□□□ -1.13
TRAF4-213ENST00000578917 SPDYE2Q495Y8 402 aa8.02□□□□□ -1.13
TRAF4-213ENST00000578917 NBPF12Q5TAG4 269 aaPredicted RBP8.02□□□□□ -1.13
TRAF4-213ENST00000578917 APOBEC3HQ6NTF7 200 aaKnown RBP8.02□□□□□ -1.13
TRAF4-213ENST00000578917 TBC1D9Q6ZT07 1266 aa8.02□□□□□ -1.13
TRAF4-213ENST00000578917 KIF1BPQ96EK5 621 aa8.02□□□□□ -1.13
TRAF4-213ENST00000578917 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.02□□□□□ -1.13
TRAF4-213ENST00000578917 CTCFP49711 727 aaPredicted RBP8.01□□□□□ -1.13
TRAF4-213ENST00000578917 KIF23Q02241 960 aaPredicted RBP8.01□□□□□ -1.13
TRAF4-213ENST00000578917 MECOMQ03112 1051 aa8.01□□□□□ -1.13
TRAF4-213ENST00000578917 TCP10Q12799 353 aa8.01□□□□□ -1.13
TRAF4-213ENST00000578917 MKRN3Q13064 507 aaKnown RBP8.01□□□□□ -1.13
TRAF4-213ENST00000578917 CDC42EP5Q6NZY7 148 aa8.01□□□□□ -1.13
TRAF4-213ENST00000578917 PI16Q6UXB8 463 aa8.01□□□□□ -1.13
TRAF4-213ENST00000578917 ZSCAN29Q8IWY8 852 aaPredicted RBP8.01□□□□□ -1.13
TRAF4-213ENST00000578917 RHPN1Q8TCX5 695 aa8.01□□□□□ -1.13
TRAF4-213ENST00000578917 EAF2Q96CJ1 260 aaPredicted RBP8.01□□□□□ -1.13
TRAF4-213ENST00000578917 TMEM39BQ9GZU3 492 aa8.01□□□□□ -1.13
TRAF4-213ENST00000578917 WBP1LQ9NX94 342 aa8.01□□□□□ -1.13
TRAF4-213ENST00000578917 AOX1Q06278 1338 aa8.01□□□□□ -1.13
TRAF4-213ENST00000578917 SALL1Q9NSC2 1324 aa8.01□□□□□ -1.13
TRAF4-213ENST00000578917 SCN9AQ15858 1988 aa8.01□□□□□ -1.13
TRAF4-213ENST00000578917 IDH1O75874 414 aaKnown RBP8□□□□□ -1.13
TRAF4-213ENST00000578917 BAG3O95817 575 aa8□□□□□ -1.13
TRAF4-213ENST00000578917 ARID4AP29374 1257 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 1470 ms