RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 SSH1Q8WYL5 1049 aa13.9□□□□□ -0.18
ABR-220ENST00000573325 ARAP2Q8WZ64 1704 aa13.9□□□□□ -0.18
ABR-220ENST00000573325 ALDH1A1P00352 501 aa13.89□□□□□ -0.19
ABR-220ENST00000573325 CRKP46108 304 aa13.89□□□□□ -0.19
ABR-220ENST00000573325 HDLBPQ00341 1268 aaKnown RBP13.89□□□□□ -0.19
ABR-220ENST00000573325 CRHR2Q13324 411 aa13.89□□□□□ -0.19
ABR-220ENST00000573325 SUPT20HL1Q3ZLR7 823 aa13.89□□□□□ -0.19
ABR-220ENST00000573325 BRI3BPQ8WY22 251 aa13.89□□□□□ -0.19
ABR-220ENST00000573325 MRIQ9BWK5 157 aa13.89□□□□□ -0.19
ABR-220ENST00000573325 TMEM39BQ9GZU3 492 aa13.89□□□□□ -0.19
ABR-220ENST00000573325 CNNM1Q9NRU3 951 aa13.89□□□□□ -0.19
ABR-220ENST00000573325 C9orf78Q9NZ63 289 aaPredicted RBP13.89□□□□□ -0.19
ABR-220ENST00000573325 TTF2Q9UNY4 1162 aaKnown RBP13.89□□□□□ -0.19
ABR-220ENST00000573325 CHMP3Q9Y3E7 222 aa13.89□□□□□ -0.19
ABR-220ENST00000573325 MROH5Q6ZUA9 1318 aa13.89□□□□□ -0.19
ABR-220ENST00000573325 ANP32CO43423 234 aa13.88□□□□□ -0.19
ABR-220ENST00000573325 PPP1R12BO60237 982 aaPredicted RBP13.88□□□□□ -0.19
ABR-220ENST00000573325 PDE8BO95263 885 aa13.88□□□□□ -0.19
ABR-220ENST00000573325 BCAMP50895 628 aa13.88□□□□□ -0.19
ABR-220ENST00000573325 SLC4A10Q6U841 1118 aa13.88□□□□□ -0.19
ABR-220ENST00000573325 ATG9AQ7Z3C6 839 aa13.88□□□□□ -0.19
ABR-220ENST00000573325 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
ABR-220ENST00000573325 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
ABR-220ENST00000573325 ZBTB22O15209 634 aa13.87□□□□□ -0.19
ABR-220ENST00000573325 SLFN5Q08AF3 891 aa13.87□□□□□ -0.19
ABR-220ENST00000573325 VGLL4Q14135 290 aa13.87□□□□□ -0.19
ABR-220ENST00000573325 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
ABR-220ENST00000573325 ANKRD13AQ8IZ07 590 aa13.87□□□□□ -0.19
ABR-220ENST00000573325 ARMC5Q96C12 935 aa13.87□□□□□ -0.19
ABR-220ENST00000573325 ZDHHC15Q96MV8 337 aa13.87□□□□□ -0.19
ABR-220ENST00000573325 VEZTQ9HBM0 779 aa13.87□□□□□ -0.19
ABR-220ENST00000573325 IQSEC3Q9UPP2 1182 aaPredicted RBP13.87□□□□□ -0.19
ABR-220ENST00000573325 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
ABR-220ENST00000573325 OPTNQ96CV9 577 aa13.86□□□□□ -0.19
ABR-220ENST00000573325 PTPN22Q9Y2R2 807 aa13.86□□□□□ -0.19
ABR-220ENST00000573325 SNCAIPQ9Y6H5 919 aa13.86□□□□□ -0.19
ABR-220ENST00000573325 MYO1BO43795 1136 aa13.85□□□□□ -0.19
ABR-220ENST00000573325 IREB2P48200 963 aaKnown RBP13.85□□□□□ -0.19
ABR-220ENST00000573325 CACNB3P54284 484 aa13.85□□□□□ -0.19
ABR-220ENST00000573325 MOGSQ13724 837 aa13.85□□□□□ -0.19
ABR-220ENST00000573325 FKBP1CQ5VVH2 108 aa13.85□□□□□ -0.19
ABR-220ENST00000573325 FAM43AQ8N2R8 423 aa13.85□□□□□ -0.19
ABR-220ENST00000573325 CDCA7LQ96GN5 454 aa13.85□□□□□ -0.19
ABR-220ENST00000573325 ELP3Q9H9T3 547 aa13.85□□□□□ -0.19
ABR-220ENST00000573325 CEP290O15078 2479 aa13.85□□□□□ -0.19
ABR-220ENST00000573325 PTPRCP08575 1304 aa13.85□□□□□ -0.19
ABR-220ENST00000573325 ATRNL1Q5VV63 1379 aa13.84□□□□□ -0.19
ABR-220ENST00000573325 SPDYE5A6NIY4 337 aa13.84□□□□□ -0.19
ABR-220ENST00000573325 TCP10L2B9ZVM9 353 aa13.84□□□□□ -0.19
ABR-220ENST00000573325 FAM83AQ86UY5 434 aa13.84□□□□□ -0.19
ABR-220ENST00000573325 CD99L2Q8TCZ2 262 aa13.84□□□□□ -0.19
ABR-220ENST00000573325 TRIM17Q9Y577 477 aa13.84□□□□□ -0.19
ABR-220ENST00000573325 SZT2Q5T011 3432 aa13.83□□□□□ -0.19
ABR-220ENST00000573325 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
ABR-220ENST00000573325 TNFAIP1Q13829 316 aa13.83□□□□□ -0.2
ABR-220ENST00000573325 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
ABR-220ENST00000573325 ZNF112Q9UJU3 913 aa13.83□□□□□ -0.2
ABR-220ENST00000573325 SUGT1Q9Y2Z0 365 aa13.83□□□□□ -0.2
ABR-220ENST00000573325 ADGRA2Q96PE1 1338 aa13.83□□□□□ -0.2
ABR-220ENST00000573325 RFX7Q2KHR2 1363 aa13.83□□□□□ -0.2
ABR-220ENST00000573325 RPAP1Q9BWH6 1393 aaPredicted RBP13.83□□□□□ -0.2
ABR-220ENST00000573325 RBBP6Q7Z6E9 1792 aaKnown RBP13.82□□□□□ -0.2
ABR-220ENST00000573325 EYA2O00167 538 aa13.82□□□□□ -0.2
ABR-220ENST00000573325 CTGFP29279 349 aa13.82□□□□□ -0.2
ABR-220ENST00000573325 RBM5P52756 815 aaKnown RBP eCLIP13.82□□□□□ -0.2
ABR-220ENST00000573325 METTL24Q5JXM2 366 aa13.82□□□□□ -0.2
ABR-220ENST00000573325 HHIPL2Q6UWX4 724 aa13.82□□□□□ -0.2
ABR-220ENST00000573325 TBC1D22AQ8WUA7 517 aa13.82□□□□□ -0.2
ABR-220ENST00000573325 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.82□□□□□ -0.2
ABR-220ENST00000573325 E9PSI1 815 aa13.81□□□□□ -0.2
ABR-220ENST00000573325 IRF6O14896 467 aa13.81□□□□□ -0.2
ABR-220ENST00000573325 SP3Q02447 781 aa13.81□□□□□ -0.2
ABR-220ENST00000573325 PUM3Q15397 648 aaKnown RBP13.81□□□□□ -0.2
ABR-220ENST00000573325 ZKSCAN4Q969J2 545 aaPredicted RBP13.81□□□□□ -0.2
ABR-220ENST00000573325 ZNF333Q96JL9 665 aa13.81□□□□□ -0.2
ABR-220ENST00000573325 FAM198AQ9UFP1 575 aa13.81□□□□□ -0.2
ABR-220ENST00000573325 BTBD19C9JJ37 291 aa13.8□□□□□ -0.2
ABR-220ENST00000573325 NFIAQ12857 509 aa13.8□□□□□ -0.2
ABR-220ENST00000573325 CHAF1AQ13111 956 aaPredicted RBP13.8□□□□□ -0.2
ABR-220ENST00000573325 ALDH1L2Q3SY69 923 aa13.8□□□□□ -0.2
ABR-220ENST00000573325 ZFPM1Q8IX07 1006 aa13.8□□□□□ -0.2
ABR-220ENST00000573325 TEKT1Q969V4 418 aa13.8□□□□□ -0.2
ABR-220ENST00000573325 ERO1AQ96HE7 468 aa13.8□□□□□ -0.2
ABR-220ENST00000573325 ARHGAP39Q9C0H5 1083 aa13.8□□□□□ -0.2
ABR-220ENST00000573325 DAGLAQ9Y4D2 1042 aa13.8□□□□□ -0.2
ABR-220ENST00000573325 ZSWIM8A7E2V4 1837 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 CCL15-CCL14A0A0B4J2E2 113 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 EN2P19622 333 aaPredicted RBP13.79□□□□□ -0.2
ABR-220ENST00000573325 PRDX5P30044 214 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 INPP5BP32019 993 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 GTF2A2P52657 109 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 MAP3K10Q02779 954 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 CCL15Q16663 113 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 INTS3Q68E01 1043 aaKnown RBP13.79□□□□□ -0.2
ABR-220ENST00000573325 CDC42EP5Q6NZY7 148 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 ZNF384Q8TF68 577 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 LPIN2Q92539 896 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
ABR-220ENST00000573325 ZCCHC17Q9NP64 241 aaKnown RBP13.79□□□□□ -0.2
ABR-220ENST00000573325 PCDH10Q9P2E7 1040 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms