RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 FAM84BQ96KN1 310 aaPredicted RBP5.99□□□□□ -1.45
CLK3-219ENST00000567805 FAM205AQ6ZU69 1335 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 FAM155AB1AL88 458 aaPredicted RBP5.98□□□□□ -1.45
CLK3-219ENST00000567805 IPO8O15397 1037 aaKnown RBP5.98□□□□□ -1.45
CLK3-219ENST00000567805 MYO1BO43795 1136 aa5.98□□□□□ -1.45
CLK3-219ENST00000567805 HSPA8P11142 646 aaKnown RBP5.98□□□□□ -1.45
CLK3-219ENST00000567805 NF2P35240 595 aa5.98□□□□□ -1.45
CLK3-219ENST00000567805 GYG1P46976 350 aa5.98□□□□□ -1.45
CLK3-219ENST00000567805 RFX5P48382 616 aaPredicted RBP5.98□□□□□ -1.45
CLK3-219ENST00000567805 ZNF157P51786 506 aaPredicted RBP5.98□□□□□ -1.45
CLK3-219ENST00000567805 LBX1P52954 281 aa5.98□□□□□ -1.45
CLK3-219ENST00000567805 HNRNPUQ00839 825 aaKnown RBP eCLIP5.98□□□□□ -1.45
CLK3-219ENST00000567805 PTPN12Q05209 780 aaKnown RBP5.98□□□□□ -1.45
CLK3-219ENST00000567805 PUM3Q15397 648 aaKnown RBP5.98□□□□□ -1.45
CLK3-219ENST00000567805 DLGAP5Q15398 846 aa5.98□□□□□ -1.45
CLK3-219ENST00000567805 CAVIN4Q5BKX8 364 aa5.98□□□□□ -1.45
CLK3-219ENST00000567805 MFSD14BQ5SR56 506 aa5.98□□□□□ -1.45
CLK3-219ENST00000567805 INTS3Q68E01 1043 aaKnown RBP5.98□□□□□ -1.45
CLK3-219ENST00000567805 FBXO33Q7Z6M2 555 aa5.98□□□□□ -1.45
CLK3-219ENST00000567805 KLHDC4Q8TBB5 520 aa5.98□□□□□ -1.45
CLK3-219ENST00000567805 SCAF8Q9UPN6 1271 aaKnown RBP5.98□□□□□ -1.45
CLK3-219ENST00000567805 OTOFQ9HC10 1997 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 CASP8AP2Q9UKL3 1982 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 F8W031 263 aaPredicted RBP5.97□□□□□ -1.45
CLK3-219ENST00000567805 EYA2O00167 538 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 MAP3K13O43283 966 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 ST18O60284 1047 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 FRAT2O75474 233 aaPredicted RBP5.97□□□□□ -1.45
CLK3-219ENST00000567805 CIAO1O76071 339 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 GNAI3P08754 354 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 SLC10A3P09131 477 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 IFIT1P09914 478 aaKnown RBP5.97□□□□□ -1.45
CLK3-219ENST00000567805 SLC5A1P13866 664 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 TRIM27P14373 513 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 FGFR2P21802 821 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 CFAP100Q494V2 611 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 ATF7IPQ6VMQ6 1270 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 TBC1D22AQ8WUA7 517 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 LPIN2Q92539 896 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 MEIS3Q99687 375 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 SERPINA10Q9UK55 444 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 JAG2Q9Y219 1238 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 PPP2R3BQ9Y5P8 575 aa5.97□□□□□ -1.45
CLK3-219ENST00000567805 LRRFIP2Q9Y608 721 aaKnown RBP5.97□□□□□ -1.45
CLK3-219ENST00000567805 MYH2Q9UKX2 1941 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 BCAR3O75815 825 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 IL15P40933 162 aaPredicted RBP5.96□□□□□ -1.46
CLK3-219ENST00000567805 BCAMP50895 628 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 RBM5P52756 815 aaKnown RBP eCLIP5.96□□□□□ -1.46
CLK3-219ENST00000567805 HDLBPQ00341 1268 aaKnown RBP5.96□□□□□ -1.46
CLK3-219ENST00000567805 CHAF1AQ13111 956 aaPredicted RBP5.96□□□□□ -1.46
CLK3-219ENST00000567805 TTLL12Q14166 644 aaPredicted RBP5.96□□□□□ -1.46
CLK3-219ENST00000567805 PRAMEF18Q5VWM3 479 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 ATG9AQ7Z3C6 839 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 ARMC9Q7Z3E5 817 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 RASAL3Q86YV0 1011 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 PRMT6Q96LA8 375 aaPredicted RBP5.96□□□□□ -1.46
CLK3-219ENST00000567805 SIL1Q9H173 461 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 DEFB129Q9H1M3 183 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 COPRSQ9NQ92 184 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 SAGE1Q9NXZ1 904 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 CEP126Q9P2H0 1117 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 TTF2Q9UNY4 1162 aaKnown RBP5.96□□□□□ -1.46
CLK3-219ENST00000567805 IQSEC3Q9UPP2 1182 aaPredicted RBP5.96□□□□□ -1.46
CLK3-219ENST00000567805 SUGT1Q9Y2Z0 365 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 PCDHAC2Q9Y5I4 1007 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 MAST3O60307 1309 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 ZBED9Q6R2W3 1325 aa5.96□□□□□ -1.46
CLK3-219ENST00000567805 AK9Q5TCS8 1911 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 CLRN2A0PK11 232 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 SSC5DA1L4H1 1573 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 UNCXA6NJT0 531 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 UBE2Q2LH0YL09 131 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 SRGAP3O43295 1099 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 SEC24BO95487 1268 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 GNAI2P04899 355 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 TIE1P35590 1138 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 CRKP46108 304 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 KIF23Q02241 960 aaPredicted RBP5.95□□□□□ -1.46
CLK3-219ENST00000567805 MMRN1Q13201 1228 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 MTX1Q13505 466 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 TNFAIP1Q13829 316 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 ATP2B3Q16720 1220 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 SUPT20HL1Q3ZLR7 823 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 ZKSCAN2Q63HK3 967 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 MOB2Q70IA6 237 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 DZIP1LQ8IYY4 767 aaKnown RBP5.95□□□□□ -1.46
CLK3-219ENST00000567805 WDR66Q8TBY9 1149 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 FRAT1Q92837 279 aaPredicted RBP5.95□□□□□ -1.46
CLK3-219ENST00000567805 TEKT1Q969V4 418 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 ZIC5Q96T25 663 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 MRIQ9BWK5 157 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 VEZTQ9HBM0 779 aa5.95□□□□□ -1.46
CLK3-219ENST00000567805 CENPFP49454 3210 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 TTLL13PA6NNM8 815 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 SEMA3EO15041 775 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 PPP1R12BO60237 982 aaPredicted RBP5.94□□□□□ -1.46
CLK3-219ENST00000567805 TNNI2P48788 182 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 RASA3Q14644 834 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 GRIK5Q16478 980 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms