RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 LPIN2Q92539 896 aa12.97□□□□□ -0.33
PTCD2P1-201ENST00000554393 FRAT1Q92837 279 aaPredicted RBP12.97□□□□□ -0.33
PTCD2P1-201ENST00000554393 CCDC102AQ96A19 550 aa12.97□□□□□ -0.33
PTCD2P1-201ENST00000554393 COPRSQ9NQ92 184 aa12.97□□□□□ -0.33
PTCD2P1-201ENST00000554393 PPP2R3BQ9Y5P8 575 aa12.97□□□□□ -0.33
PTCD2P1-201ENST00000554393 CA12O43570 354 aa12.96□□□□□ -0.33
PTCD2P1-201ENST00000554393 MYO1BO43795 1136 aa12.96□□□□□ -0.33
PTCD2P1-201ENST00000554393 SLC5A1P13866 664 aa12.96□□□□□ -0.33
PTCD2P1-201ENST00000554393 NF2P35240 595 aa12.96□□□□□ -0.33
PTCD2P1-201ENST00000554393 IL15P40933 162 aaPredicted RBP12.96□□□□□ -0.33
PTCD2P1-201ENST00000554393 CFAP100Q494V2 611 aa12.96□□□□□ -0.33
PTCD2P1-201ENST00000554393 BEGAINQ9BUH8 593 aa12.96□□□□□ -0.33
PTCD2P1-201ENST00000554393 SERPINA10Q9UK55 444 aa12.96□□□□□ -0.33
PTCD2P1-201ENST00000554393 LAMB1P07942 1786 aa12.96□□□□□ -0.34
PTCD2P1-201ENST00000554393 FAM155AB1AL88 458 aaPredicted RBP12.95□□□□□ -0.34
PTCD2P1-201ENST00000554393 AOC2O75106 756 aa12.95□□□□□ -0.34
PTCD2P1-201ENST00000554393 HDLBPQ00341 1268 aaKnown RBP12.95□□□□□ -0.34
PTCD2P1-201ENST00000554393 CEP126Q9P2H0 1117 aa12.95□□□□□ -0.34
PTCD2P1-201ENST00000554393 JAG2Q9Y219 1238 aa12.95□□□□□ -0.34
PTCD2P1-201ENST00000554393 SUGT1Q9Y2Z0 365 aa12.95□□□□□ -0.34
PTCD2P1-201ENST00000554393 PDE4DIPQ5VU43 2346 aa12.95□□□□□ -0.34
PTCD2P1-201ENST00000554393 F8W031 263 aaPredicted RBP12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 FRAT2O75474 233 aaPredicted RBP12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 GNAI2P04899 355 aa12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 SLC10A3P09131 477 aa12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 BCAMP50895 628 aa12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 ZNF157P51786 506 aaPredicted RBP12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 ATP2B3Q16720 1220 aa12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 PRPF38BQ5VTL8 546 aaKnown RBP12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 PRMT6Q96LA8 375 aaPredicted RBP12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 SIL1Q9H173 461 aa12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 TTF2Q9UNY4 1162 aaKnown RBP12.94□□□□□ -0.34
PTCD2P1-201ENST00000554393 MAST3O60307 1309 aa12.93□□□□□ -0.34
PTCD2P1-201ENST00000554393 SRGAP3O43295 1099 aa12.93□□□□□ -0.34
PTCD2P1-201ENST00000554393 CLUAP1Q96AJ1 413 aa12.93□□□□□ -0.34
PTCD2P1-201ENST00000554393 MRIQ9BWK5 157 aa12.93□□□□□ -0.34
PTCD2P1-201ENST00000554393 DEFB129Q9H1M3 183 aa12.93□□□□□ -0.34
PTCD2P1-201ENST00000554393 SCAF8Q9UPN6 1271 aaKnown RBP12.93□□□□□ -0.34
PTCD2P1-201ENST00000554393 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
PTCD2P1-201ENST00000554393 SEMA3EO15041 775 aa12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 RBM5P52756 815 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 CHAF1AQ13111 956 aaPredicted RBP12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 TNFAIP1Q13829 316 aa12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 ARMC9Q7Z3E5 817 aa12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 RASAL3Q86YV0 1011 aa12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 FTSJ3Q8IY81 847 aaKnown RBP12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 TMEM57Q8N5G2 664 aa12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 WDR66Q8TBY9 1149 aa12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 IQSEC3Q9UPP2 1182 aaPredicted RBP12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 PA2G4Q9UQ80 394 aaKnown RBP12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
PTCD2P1-201ENST00000554393 SSC5DA1L4H1 1573 aa12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 CLRN2A0PK11 232 aa12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 UNCXA6NJT0 531 aa12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 CRKP46108 304 aa12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 SUPT20HL1Q3ZLR7 823 aa12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 PRAMEF18Q5VWM3 479 aa12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 RASEFQ8IZ41 740 aa12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 GNL3LQ9NVN8 582 aaKnown RBP12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 SAGE1Q9NXZ1 904 aa12.91□□□□□ -0.34
PTCD2P1-201ENST00000554393 OTOFQ9HC10 1997 aa12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 SALL1Q9NSC2 1324 aa12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 KIF23Q02241 960 aaPredicted RBP12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 TTLL12Q14166 644 aaPredicted RBP12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 GRIK5Q16478 980 aa12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 MAP3K11Q16584 847 aa12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 MOB2Q70IA6 237 aa12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 TEKT1Q969V4 418 aa12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 ZDHHC15Q96MV8 337 aa12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 VEZTQ9HBM0 779 aa12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 ZNF70Q9UC06 446 aaPredicted RBP12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 AKAP2Q9Y2D5 859 aa12.9□□□□□ -0.34
PTCD2P1-201ENST00000554393 AOX1Q06278 1338 aa12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 PDS5AQ29RF7 1337 aaKnown RBP12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 CASP8AP2Q9UKL3 1982 aa12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 UBE2Q2LH0YL09 131 aa12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 PPP1R12BO60237 982 aaPredicted RBP12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 RASA3Q14644 834 aa12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 GSE1Q14687 1217 aa12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 LDLRAD1Q5T700 205 aa12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 HHIPL2Q6UWX4 724 aa12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 ZIC5Q96T25 663 aa12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 DENND2AQ9ULE3 1009 aa12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 MYH2Q9UKX2 1941 aa12.89□□□□□ -0.35
PTCD2P1-201ENST00000554393 PNMA6EA0A0J9YXQ4 647 aa12.88□□□□□ -0.35
PTCD2P1-201ENST00000554393 TNNI2P48788 182 aa12.88□□□□□ -0.35
PTCD2P1-201ENST00000554393 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
PTCD2P1-201ENST00000554393 FKBP1CQ5VVH2 108 aa12.88□□□□□ -0.35
PTCD2P1-201ENST00000554393 CCDC102BQ68D86 513 aa12.88□□□□□ -0.35
PTCD2P1-201ENST00000554393 ITPRIPQ8IWB1 547 aa12.88□□□□□ -0.35
PTCD2P1-201ENST00000554393 TDRD3Q9H7E2 651 aaKnown RBP12.88□□□□□ -0.35
PTCD2P1-201ENST00000554393 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
PTCD2P1-201ENST00000554393 RPAP1Q9BWH6 1393 aaPredicted RBP12.87□□□□□ -0.35
PTCD2P1-201ENST00000554393 A0A1B0GUL7 405 aa12.87□□□□□ -0.35
PTCD2P1-201ENST00000554393 ZBTB7BO15156 539 aaPredicted RBP12.87□□□□□ -0.35
PTCD2P1-201ENST00000554393 MS4A1P11836 297 aa12.87□□□□□ -0.35
PTCD2P1-201ENST00000554393 RLBP1P12271 317 aa12.87□□□□□ -0.35
PTCD2P1-201ENST00000554393 PHKA1P46020 1223 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms