RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 UBE2Q2LH0YL09 131 aa12.88□□□□□ -0.35
BEST3-208ENST00000547208 DGKZQ13574 1117 aa12.88□□□□□ -0.35
BEST3-208ENST00000547208 CAVIN4Q5BKX8 364 aa12.88□□□□□ -0.35
BEST3-208ENST00000547208 ATF7IPQ6VMQ6 1270 aa12.88□□□□□ -0.35
BEST3-208ENST00000547208 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
BEST3-208ENST00000547208 TTF2Q9UNY4 1162 aaKnown RBP12.88□□□□□ -0.35
BEST3-208ENST00000547208 MTX1Q13505 466 aa12.87□□□□□ -0.35
BEST3-208ENST00000547208 LDLRAD1Q5T700 205 aa12.87□□□□□ -0.35
BEST3-208ENST00000547208 VPS37DQ86XT2 251 aa12.87□□□□□ -0.35
BEST3-208ENST00000547208 LPIN2Q92539 896 aa12.87□□□□□ -0.35
BEST3-208ENST00000547208 CSRNP1Q96S65 589 aa12.87□□□□□ -0.35
BEST3-208ENST00000547208 SIL1Q9H173 461 aa12.87□□□□□ -0.35
BEST3-208ENST00000547208 COPRSQ9NQ92 184 aa12.87□□□□□ -0.35
BEST3-208ENST00000547208 FZD1Q9UP38 647 aa12.87□□□□□ -0.35
BEST3-208ENST00000547208 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
BEST3-208ENST00000547208 PPP2R3BQ9Y5P8 575 aa12.87□□□□□ -0.35
BEST3-208ENST00000547208 IPO8O15397 1037 aaKnown RBP12.86□□□□□ -0.35
BEST3-208ENST00000547208 MYO1BO43795 1136 aa12.86□□□□□ -0.35
BEST3-208ENST00000547208 GNAI3P08754 354 aa12.86□□□□□ -0.35
BEST3-208ENST00000547208 IFIT1P09914 478 aaKnown RBP12.86□□□□□ -0.35
BEST3-208ENST00000547208 NF2P35240 595 aa12.86□□□□□ -0.35
BEST3-208ENST00000547208 CHAF1AQ13111 956 aaPredicted RBP12.86□□□□□ -0.35
BEST3-208ENST00000547208 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
BEST3-208ENST00000547208 TBC1D22AQ8WUA7 517 aa12.86□□□□□ -0.35
BEST3-208ENST00000547208 SAGE1Q9NXZ1 904 aa12.86□□□□□ -0.35
BEST3-208ENST00000547208 HDAC5Q9UQL6 1122 aa12.86□□□□□ -0.35
BEST3-208ENST00000547208 ZBED9Q6R2W3 1325 aa12.86□□□□□ -0.35
BEST3-208ENST00000547208 SLC5A1P13866 664 aa12.85□□□□□ -0.35
BEST3-208ENST00000547208 CRKP46108 304 aa12.85□□□□□ -0.35
BEST3-208ENST00000547208 RBM5P52756 815 aaKnown RBP eCLIP12.85□□□□□ -0.35
BEST3-208ENST00000547208 HDLBPQ00341 1268 aaKnown RBP12.85□□□□□ -0.35
BEST3-208ENST00000547208 TTLL12Q14166 644 aaPredicted RBP12.85□□□□□ -0.35
BEST3-208ENST00000547208 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
BEST3-208ENST00000547208 ATP2B3Q16720 1220 aa12.85□□□□□ -0.35
BEST3-208ENST00000547208 DZIP1LQ8IYY4 767 aaKnown RBP12.85□□□□□ -0.35
BEST3-208ENST00000547208 FRAT1Q92837 279 aaPredicted RBP12.85□□□□□ -0.35
BEST3-208ENST00000547208 CLUAP1Q96AJ1 413 aa12.85□□□□□ -0.35
BEST3-208ENST00000547208 TDRD3Q9H7E2 651 aaKnown RBP12.85□□□□□ -0.35
BEST3-208ENST00000547208 VEZTQ9HBM0 779 aa12.85□□□□□ -0.35
BEST3-208ENST00000547208 RNF186Q9NXI6 227 aa12.85□□□□□ -0.35
BEST3-208ENST00000547208 ZNF70Q9UC06 446 aaPredicted RBP12.85□□□□□ -0.35
BEST3-208ENST00000547208 IL15P40933 162 aaPredicted RBP12.84□□□□□ -0.35
BEST3-208ENST00000547208 PRKG1Q13976 671 aa12.84□□□□□ -0.35
BEST3-208ENST00000547208 RASA3Q14644 834 aa12.84□□□□□ -0.35
BEST3-208ENST00000547208 NBPF12Q5TAG4 269 aaPredicted RBP12.84□□□□□ -0.35
BEST3-208ENST00000547208 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
BEST3-208ENST00000547208 TEPSINQ96N21 525 aa12.84□□□□□ -0.35
BEST3-208ENST00000547208 CEP126Q9P2H0 1117 aa12.84□□□□□ -0.35
BEST3-208ENST00000547208 ANGEL1Q9UNK9 670 aaKnown RBP12.84□□□□□ -0.35
BEST3-208ENST00000547208 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.84□□□□□ -0.35
BEST3-208ENST00000547208 MYO5AQ9Y4I1 1855 aaKnown RBP12.84□□□□□ -0.35
BEST3-208ENST00000547208 AK9Q5TCS8 1911 aa12.84□□□□□ -0.35
BEST3-208ENST00000547208 SRGAP3O43295 1099 aa12.83□□□□□ -0.36
BEST3-208ENST00000547208 FRAT2O75474 233 aaPredicted RBP12.83□□□□□ -0.36
BEST3-208ENST00000547208 ZKSCAN2Q63HK3 967 aa12.83□□□□□ -0.36
BEST3-208ENST00000547208 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
BEST3-208ENST00000547208 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.36
BEST3-208ENST00000547208 TMEM57Q8N5G2 664 aa12.83□□□□□ -0.36
BEST3-208ENST00000547208 ZDHHC15Q96MV8 337 aa12.83□□□□□ -0.36
BEST3-208ENST00000547208 MRIQ9BWK5 157 aa12.83□□□□□ -0.36
BEST3-208ENST00000547208 SUGT1Q9Y2Z0 365 aa12.83□□□□□ -0.36
BEST3-208ENST00000547208 DOCK2Q92608 1830 aa12.83□□□□□ -0.36
BEST3-208ENST00000547208 USP2O75604 605 aaPredicted RBP12.82□□□□□ -0.36
BEST3-208ENST00000547208 TRPA1O75762 1119 aa12.82□□□□□ -0.36
BEST3-208ENST00000547208 ADORA1P30542 326 aa12.82□□□□□ -0.36
BEST3-208ENST00000547208 PHKA1P46020 1223 aa12.82□□□□□ -0.36
BEST3-208ENST00000547208 APOBEC3HQ6NTF7 200 aaKnown RBP12.82□□□□□ -0.36
BEST3-208ENST00000547208 TEKT1Q969V4 418 aa12.82□□□□□ -0.36
BEST3-208ENST00000547208 CLMNQ96JQ2 1002 aa12.82□□□□□ -0.36
BEST3-208ENST00000547208 PNMA6EA0A0J9YXQ4 647 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 GNAI2P04899 355 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 RLBP1P12271 317 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 TM4SF4P48230 202 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 TNFAIP1Q13829 316 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 SUPT20HL1Q3ZLR7 823 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 SPRYD7Q5W111 196 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 WDR66Q8TBY9 1149 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 TMEM39BQ9GZU3 492 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 MAST3O60307 1309 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 SALL1Q9NSC2 1324 aa12.81□□□□□ -0.36
BEST3-208ENST00000547208 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 MAST2Q6P0Q8 1798 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 UNCXA6NJT0 531 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 TCP10L2B9ZVM9 353 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 SEMA3EO15041 775 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 PPP1R12BO60237 982 aaPredicted RBP12.8□□□□□ -0.36
BEST3-208ENST00000547208 PRDX5P30044 214 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 CACNB3P54284 484 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 TIMM10P62072 90 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 TFCP2Q12800 502 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 MKRN3Q13064 507 aaKnown RBP12.8□□□□□ -0.36
BEST3-208ENST00000547208 CCDC102BQ68D86 513 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 HHIPL2Q6UWX4 724 aa12.8□□□□□ -0.36
BEST3-208ENST00000547208 A0A1B0GUL7 405 aa12.79□□□□□ -0.36
BEST3-208ENST00000547208 FKBP1CQ5VVH2 108 aa12.79□□□□□ -0.36
BEST3-208ENST00000547208 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
BEST3-208ENST00000547208 RPAP1Q9BWH6 1393 aaPredicted RBP12.79□□□□□ -0.36
BEST3-208ENST00000547208 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
BEST3-208ENST00000547208 ZBTB48P10074 688 aaPredicted RBP12.78□□□□□ -0.36
BEST3-208ENST00000547208 GJA5P36382 358 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms