RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 TOMM70O94826 608 aa14.72□□□□□ -0.05
CHD4-203ENST00000535717 CFAP100Q494V2 611 aa14.72□□□□□ -0.05
CHD4-203ENST00000535717 TSHZ3Q63HK5 1081 aa14.72□□□□□ -0.05
CHD4-203ENST00000535717 SPTY2D1Q68D10 685 aaPredicted RBP14.72□□□□□ -0.05
CHD4-203ENST00000535717 MTMR14Q8NCE2 650 aa14.72□□□□□ -0.05
CHD4-203ENST00000535717 GPATCH3Q96I76 525 aa14.72□□□□□ -0.05
CHD4-203ENST00000535717 ZBED3Q96IU2 234 aaPredicted RBP14.72□□□□□ -0.05
CHD4-203ENST00000535717 BOLA2Q9H3K6 86 aa14.72□□□□□ -0.05
CHD4-203ENST00000535717 PIH1D3Q9NQM4 214 aaKnown RBP14.72□□□□□ -0.05
CHD4-203ENST00000535717 SERPINA10Q9UK55 444 aa14.72□□□□□ -0.05
CHD4-203ENST00000535717 CLEC11AQ9Y240 323 aa14.72□□□□□ -0.05
CHD4-203ENST00000535717 ASTN2O75129 1339 aaPredicted RBP14.71□□□□□ -0.05
CHD4-203ENST00000535717 WNT10BO00744 389 aa14.71□□□□□ -0.05
CHD4-203ENST00000535717 CRKP46108 304 aa14.71□□□□□ -0.05
CHD4-203ENST00000535717 HDLBPQ00341 1268 aaKnown RBP14.71□□□□□ -0.05
CHD4-203ENST00000535717 DLGAP5Q15398 846 aa14.71□□□□□ -0.05
CHD4-203ENST00000535717 NBPF9Q3BBW0 867 aa14.71□□□□□ -0.05
CHD4-203ENST00000535717 RBM46Q8TBY0 533 aaKnown RBP14.71□□□□□ -0.05
CHD4-203ENST00000535717 MRIQ9BWK5 157 aa14.71□□□□□ -0.05
CHD4-203ENST00000535717 ANTXR1Q9H6X2 564 aa14.71□□□□□ -0.05
CHD4-203ENST00000535717 PGAP2Q9UHJ9 254 aa14.71□□□□□ -0.05
CHD4-203ENST00000535717 MAST3O60307 1309 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 AOX1Q06278 1338 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 MX1P20591 662 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 RBM5P52756 815 aaKnown RBP eCLIP14.7□□□□□ -0.06
CHD4-203ENST00000535717 MECOMQ03112 1051 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 DIXDC1Q155Q3 683 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 ERICH6Q7L0X2 663 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 ZNF384Q8TF68 577 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 ZC3H15Q8WU90 426 aaKnown RBP14.7□□□□□ -0.06
CHD4-203ENST00000535717 TEKT1Q969V4 418 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 PRMT6Q96LA8 375 aaPredicted RBP14.7□□□□□ -0.06
CHD4-203ENST00000535717 DNAJC2Q99543 621 aaKnown RBP14.7□□□□□ -0.06
CHD4-203ENST00000535717 HAUS7Q99871 368 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 LRP2BPQ9P2M1 347 aa14.7□□□□□ -0.06
CHD4-203ENST00000535717 TTC41PQ6P2S7 1318 aa14.69□□□□□ -0.06
CHD4-203ENST00000535717 GOLIM4O00461 696 aa14.69□□□□□ -0.06
CHD4-203ENST00000535717 ERICH6BQ5W0A0 696 aa14.69□□□□□ -0.06
CHD4-203ENST00000535717 MAP1SQ66K74 1059 aaPredicted RBP14.69□□□□□ -0.06
CHD4-203ENST00000535717 HHIPL2Q6UWX4 724 aa14.69□□□□□ -0.06
CHD4-203ENST00000535717 DZIP1Q86YF9 867 aaKnown RBP14.69□□□□□ -0.06
CHD4-203ENST00000535717 SMC1BQ8NDV3 1235 aa14.69□□□□□ -0.06
CHD4-203ENST00000535717 PI4K2BQ8TCG2 481 aa14.69□□□□□ -0.06
CHD4-203ENST00000535717 NSUN4Q96CB9 384 aaKnown RBP14.69□□□□□ -0.06
CHD4-203ENST00000535717 EDC3Q96F86 508 aaKnown RBP14.69□□□□□ -0.06
CHD4-203ENST00000535717 ZDHHC15Q96MV8 337 aa14.69□□□□□ -0.06
CHD4-203ENST00000535717 GGA3Q9NZ52 723 aa14.69□□□□□ -0.06
CHD4-203ENST00000535717 RAI14Q9P0K7 980 aa14.69□□□□□ -0.06
CHD4-203ENST00000535717 STAP2Q9UGK3 403 aa14.69□□□□□ -0.06
CHD4-203ENST00000535717 MYO5AQ9Y4I1 1855 aaKnown RBP14.69□□□□□ -0.06
CHD4-203ENST00000535717 PDE1AP54750 535 aa14.68□□□□□ -0.06
CHD4-203ENST00000535717 ANGEL2Q5VTE6 544 aaKnown RBP14.68□□□□□ -0.06
CHD4-203ENST00000535717 APOBEC3HQ6NTF7 200 aaKnown RBP14.68□□□□□ -0.06
CHD4-203ENST00000535717 CCDC136Q96JN2 1154 aa14.68□□□□□ -0.06
CHD4-203ENST00000535717 PAG1Q9NWQ8 432 aa14.68□□□□□ -0.06
CHD4-203ENST00000535717 DAGLAQ9Y4D2 1042 aa14.68□□□□□ -0.06
CHD4-203ENST00000535717 ERC2O15083 957 aa14.67□□□□□ -0.06
CHD4-203ENST00000535717 IDH1O75874 414 aaKnown RBP14.67□□□□□ -0.06
CHD4-203ENST00000535717 GLRX3O76003 335 aaKnown RBP14.67□□□□□ -0.06
CHD4-203ENST00000535717 PDE4AP27815 886 aa14.67□□□□□ -0.06
CHD4-203ENST00000535717 FSTL1Q12841 308 aa14.67□□□□□ -0.06
CHD4-203ENST00000535717 TTF1Q15361 905 aaPredicted RBP14.67□□□□□ -0.06
CHD4-203ENST00000535717 CENPQQ7L2Z9 268 aaPredicted RBP14.67□□□□□ -0.06
CHD4-203ENST00000535717 PLEKHM2Q8IWE5 1019 aa14.67□□□□□ -0.06
CHD4-203ENST00000535717 CNTROBQ8N137 903 aa14.67□□□□□ -0.06
CHD4-203ENST00000535717 FAM163AQ96GL9 167 aaPredicted RBP14.67□□□□□ -0.06
CHD4-203ENST00000535717 GAKO14976 1311 aa14.66□□□□□ -0.06
CHD4-203ENST00000535717 MYH2Q9UKX2 1941 aa14.66□□□□□ -0.06
CHD4-203ENST00000535717 POLR2AP24928 1970 aaKnown RBP14.66□□□□□ -0.06
CHD4-203ENST00000535717 CLRN2A0PK11 232 aa14.66□□□□□ -0.06
CHD4-203ENST00000535717 ITGBL1O95965 494 aaPredicted RBP14.66□□□□□ -0.06
CHD4-203ENST00000535717 GSTO1P78417 241 aa14.66□□□□□ -0.06
CHD4-203ENST00000535717 SLF2Q8IX21 1173 aa14.66□□□□□ -0.06
CHD4-203ENST00000535717 DCPSQ96C86 337 aaKnown RBP14.66□□□□□ -0.06
CHD4-203ENST00000535717 GLIS2Q9BZE0 524 aaPredicted RBP14.66□□□□□ -0.06
CHD4-203ENST00000535717 TDRD3Q9H7E2 651 aaKnown RBP14.66□□□□□ -0.06
CHD4-203ENST00000535717 DOCK2Q92608 1830 aa14.66□□□□□ -0.06
CHD4-203ENST00000535717 MROH7-TTC4A0A0A0MT08 1334 aa14.66□□□□□ -0.06
CHD4-203ENST00000535717 PITPNM2Q9BZ72 1349 aa14.66□□□□□ -0.06
CHD4-203ENST00000535717 MYO1BO43795 1136 aa14.65□□□□□ -0.06
CHD4-203ENST00000535717 IGSF3O75054 1194 aa14.65□□□□□ -0.06
CHD4-203ENST00000535717 MAP4K4O95819 1239 aaPredicted RBP14.65□□□□□ -0.06
CHD4-203ENST00000535717 LDHCP07864 332 aa14.65□□□□□ -0.06
CHD4-203ENST00000535717 MAP3K12Q12852 859 aa14.65□□□□□ -0.06
CHD4-203ENST00000535717 SPDYE2Q495Y8 402 aa14.65□□□□□ -0.06
CHD4-203ENST00000535717 NAA16Q6N069 864 aaPredicted RBP14.65□□□□□ -0.06
CHD4-203ENST00000535717 DLK2Q6UY11 383 aa14.65□□□□□ -0.06
CHD4-203ENST00000535717 KRT26Q7Z3Y9 468 aa14.65□□□□□ -0.06
CHD4-203ENST00000535717 USP48Q86UV5 1035 aa14.65□□□□□ -0.06
CHD4-203ENST00000535717 PPP4R2Q9NY27 417 aa14.65□□□□□ -0.06
CHD4-203ENST00000535717 ZNF70Q9UC06 446 aaPredicted RBP14.65□□□□□ -0.06
CHD4-203ENST00000535717 SCAF8Q9UPN6 1271 aaKnown RBP14.65□□□□□ -0.06
CHD4-203ENST00000535717 MAST2Q6P0Q8 1798 aa14.65□□□□□ -0.06
CHD4-203ENST00000535717 ECM29Q5VYK3 1845 aa14.64□□□□□ -0.07
CHD4-203ENST00000535717 GPR75-ASB3A0A0A6YYF3 556 aa14.64□□□□□ -0.07
CHD4-203ENST00000535717 ADM5C9JUS6 153 aa14.64□□□□□ -0.07
CHD4-203ENST00000535717 TRAF5O00463 557 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms