RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 ZNF157P51786 506 aaPredicted RBP13.52□□□□□ -0.25
CCDC60-202ENST00000535685 GRM1Q13255 1194 aa13.52□□□□□ -0.25
CCDC60-202ENST00000535685 DLGAP5Q15398 846 aa13.52□□□□□ -0.25
CCDC60-202ENST00000535685 LRRC24Q50LG9 513 aa13.52□□□□□ -0.25
CCDC60-202ENST00000535685 PPP2R3BQ9Y5P8 575 aa13.52□□□□□ -0.25
CCDC60-202ENST00000535685 EYA2O00167 538 aa13.51□□□□□ -0.25
CCDC60-202ENST00000535685 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
CCDC60-202ENST00000535685 FGFR2P21802 821 aa13.51□□□□□ -0.25
CCDC60-202ENST00000535685 NF2P35240 595 aa13.51□□□□□ -0.25
CCDC60-202ENST00000535685 GYG1P46976 350 aa13.51□□□□□ -0.25
CCDC60-202ENST00000535685 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
CCDC60-202ENST00000535685 METTL24Q5JXM2 366 aa13.51□□□□□ -0.25
CCDC60-202ENST00000535685 INTS3Q68E01 1043 aaKnown RBP13.51□□□□□ -0.25
CCDC60-202ENST00000535685 ZIC5Q96T25 663 aa13.51□□□□□ -0.25
CCDC60-202ENST00000535685 SAGE1Q9NXZ1 904 aa13.51□□□□□ -0.25
CCDC60-202ENST00000535685 LAMB1P07942 1786 aa13.5□□□□□ -0.25
CCDC60-202ENST00000535685 CIAO1O76071 339 aa13.5□□□□□ -0.25
CCDC60-202ENST00000535685 HDLBPQ00341 1268 aaKnown RBP13.5□□□□□ -0.25
CCDC60-202ENST00000535685 CFAP100Q494V2 611 aa13.5□□□□□ -0.25
CCDC60-202ENST00000535685 CAVIN4Q5BKX8 364 aa13.5□□□□□ -0.25
CCDC60-202ENST00000535685 TBC1D22AQ8WUA7 517 aa13.5□□□□□ -0.25
CCDC60-202ENST00000535685 MRIQ9BWK5 157 aa13.5□□□□□ -0.25
CCDC60-202ENST00000535685 SERPINA10Q9UK55 444 aa13.5□□□□□ -0.25
CCDC60-202ENST00000535685 UNCXA6NJT0 531 aa13.49□□□□□ -0.25
CCDC60-202ENST00000535685 IPO8O15397 1037 aaKnown RBP13.49□□□□□ -0.25
CCDC60-202ENST00000535685 MYO1BO43795 1136 aa13.49□□□□□ -0.25
CCDC60-202ENST00000535685 KIF23Q02241 960 aaPredicted RBP13.49□□□□□ -0.25
CCDC60-202ENST00000535685 PUM3Q15397 648 aaKnown RBP13.49□□□□□ -0.25
CCDC60-202ENST00000535685 MAP3K11Q16584 847 aa13.49□□□□□ -0.25
CCDC60-202ENST00000535685 MFSD14BQ5SR56 506 aa13.49□□□□□ -0.25
CCDC60-202ENST00000535685 ATG9AQ7Z3C6 839 aa13.49□□□□□ -0.25
CCDC60-202ENST00000535685 RASAL3Q86YV0 1011 aa13.49□□□□□ -0.25
CCDC60-202ENST00000535685 PRMT6Q96LA8 375 aaPredicted RBP13.49□□□□□ -0.25
CCDC60-202ENST00000535685 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
CCDC60-202ENST00000535685 SUGT1Q9Y2Z0 365 aa13.49□□□□□ -0.25
CCDC60-202ENST00000535685 IFIT1P09914 478 aaKnown RBP13.48□□□□□ -0.25
CCDC60-202ENST00000535685 LDLRAD1Q5T700 205 aa13.48□□□□□ -0.25
CCDC60-202ENST00000535685 PRAMEF18Q5VWM3 479 aa13.48□□□□□ -0.25
CCDC60-202ENST00000535685 DIEXFQ68CQ4 756 aaKnown RBP13.48□□□□□ -0.25
CCDC60-202ENST00000535685 ARMC9Q7Z3E5 817 aa13.48□□□□□ -0.25
CCDC60-202ENST00000535685 VPS37DQ86XT2 251 aa13.48□□□□□ -0.25
CCDC60-202ENST00000535685 IFNL1Q8IU54 200 aa13.48□□□□□ -0.25
CCDC60-202ENST00000535685 KLHDC4Q8TBB5 520 aa13.48□□□□□ -0.25
CCDC60-202ENST00000535685 CSRNP1Q96S65 589 aa13.48□□□□□ -0.25
CCDC60-202ENST00000535685 MAP3K13O43283 966 aa13.47□□□□□ -0.25
CCDC60-202ENST00000535685 GNAI3P08754 354 aa13.47□□□□□ -0.25
CCDC60-202ENST00000535685 MTX1Q13505 466 aa13.47□□□□□ -0.25
CCDC60-202ENST00000535685 LPIN2Q92539 896 aa13.47□□□□□ -0.25
CCDC60-202ENST00000535685 KIF12Q96FN5 646 aa13.47□□□□□ -0.25
CCDC60-202ENST00000535685 COPRSQ9NQ92 184 aa13.47□□□□□ -0.25
CCDC60-202ENST00000535685 TTF2Q9UNY4 1162 aaKnown RBP13.47□□□□□ -0.25
CCDC60-202ENST00000535685 SCAF8Q9UPN6 1271 aaKnown RBP13.47□□□□□ -0.25
CCDC60-202ENST00000535685 F8W031 263 aaPredicted RBP13.46□□□□□ -0.25
CCDC60-202ENST00000535685 UBE2Q2LH0YL09 131 aa13.46□□□□□ -0.25
CCDC60-202ENST00000535685 TNFAIP1Q13829 316 aa13.46□□□□□ -0.25
CCDC60-202ENST00000535685 SUPT20HL1Q3ZLR7 823 aa13.46□□□□□ -0.25
CCDC60-202ENST00000535685 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.25
CCDC60-202ENST00000535685 MOB2Q70IA6 237 aa13.46□□□□□ -0.25
CCDC60-202ENST00000535685 MEIS3Q99687 375 aa13.46□□□□□ -0.25
CCDC60-202ENST00000535685 JAG2Q9Y219 1238 aa13.46□□□□□ -0.25
CCDC60-202ENST00000535685 PCDHAC2Q9Y5I4 1007 aa13.46□□□□□ -0.25
CCDC60-202ENST00000535685 LRRFIP2Q9Y608 721 aaKnown RBP13.46□□□□□ -0.25
CCDC60-202ENST00000535685 SLC5A1P13866 664 aa13.45□□□□□ -0.26
CCDC60-202ENST00000535685 TRIM27P14373 513 aa13.45□□□□□ -0.26
CCDC60-202ENST00000535685 IL15P40933 162 aaPredicted RBP13.45□□□□□ -0.26
CCDC60-202ENST00000535685 TM4SF4P48230 202 aa13.45□□□□□ -0.26
CCDC60-202ENST00000535685 BCAMP50895 628 aa13.45□□□□□ -0.26
CCDC60-202ENST00000535685 DZIP1LQ8IYY4 767 aaKnown RBP13.45□□□□□ -0.26
CCDC60-202ENST00000535685 RNF186Q9NXI6 227 aa13.45□□□□□ -0.26
CCDC60-202ENST00000535685 CEP126Q9P2H0 1117 aa13.45□□□□□ -0.26
CCDC60-202ENST00000535685 ZNF70Q9UC06 446 aaPredicted RBP13.45□□□□□ -0.26
CCDC60-202ENST00000535685 SSC5DA1L4H1 1573 aa13.45□□□□□ -0.26
CCDC60-202ENST00000535685 MAST3O60307 1309 aa13.44□□□□□ -0.26
CCDC60-202ENST00000535685 AOX1Q06278 1338 aa13.44□□□□□ -0.26
CCDC60-202ENST00000535685 PPP1R12BO60237 982 aaPredicted RBP13.44□□□□□ -0.26
CCDC60-202ENST00000535685 CRKP46108 304 aa13.44□□□□□ -0.26
CCDC60-202ENST00000535685 TTLL12Q14166 644 aaPredicted RBP13.44□□□□□ -0.26
CCDC60-202ENST00000535685 WDR66Q8TBY9 1149 aa13.44□□□□□ -0.26
CCDC60-202ENST00000535685 CLRN2A0PK11 232 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 SEMA3EO15041 775 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 FRAT2O75474 233 aaPredicted RBP13.43□□□□□ -0.26
CCDC60-202ENST00000535685 BCAR3O75815 825 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 RBM5P52756 815 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC60-202ENST00000535685 RASA3Q14644 834 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 GRIK5Q16478 980 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 ATP2B3Q16720 1220 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 NOM1Q5C9Z4 860 aaKnown RBP13.43□□□□□ -0.26
CCDC60-202ENST00000535685 FKBP1CQ5VVH2 108 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 HHIPL2Q6UWX4 724 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 ZDHHC15Q96MV8 337 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 CFHR5Q9BXR6 569 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 MFRPQ9BY79 579 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
CCDC60-202ENST00000535685 ANGEL1Q9UNK9 670 aaKnown RBP13.43□□□□□ -0.26
CCDC60-202ENST00000535685 SALL1Q9NSC2 1324 aa13.42□□□□□ -0.26
CCDC60-202ENST00000535685 HNRNPUQ00839 825 aaKnown RBP eCLIP13.42□□□□□ -0.26
CCDC60-202ENST00000535685 CHAF1AQ13111 956 aaPredicted RBP13.42□□□□□ -0.26
CCDC60-202ENST00000535685 SPRYD7Q5W111 196 aa13.42□□□□□ -0.26
CCDC60-202ENST00000535685 TEKT1Q969V4 418 aa13.42□□□□□ -0.26
CCDC60-202ENST00000535685 ABHD8Q96I13 439 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms