RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 MAP3K11Q16584 847 aa17■□□□□ 0.31
DDX41-208ENST00000507955 UVSSAQ2YD98 709 aa17■□□□□ 0.31
DDX41-208ENST00000507955 LUZP1Q86V48 1076 aa17■□□□□ 0.31
DDX41-208ENST00000507955 AIDAQ96BJ3 306 aa17■□□□□ 0.31
DDX41-208ENST00000507955 TACC3Q9Y6A5 838 aa17■□□□□ 0.31
DDX41-208ENST00000507955 PLCH1Q4KWH8 1693 aa17■□□□□ 0.31
DDX41-208ENST00000507955 UBE2Q2LH0YL09 131 aa17■□□□□ 0.31
DDX41-208ENST00000507955 MIGA1Q8NAN2 632 aa17■□□□□ 0.31
DDX41-208ENST00000507955 TTC12Q9H892 705 aaPredicted RBP17■□□□□ 0.31
DDX41-208ENST00000507955 MRVI1Q9Y6F6 885 aa17■□□□□ 0.31
DDX41-208ENST00000507955 MROH5Q6ZUA9 1318 aa16.99■□□□□ 0.31
DDX41-208ENST00000507955 MBD4O95243 580 aa16.99■□□□□ 0.31
DDX41-208ENST00000507955 HMGN5P82970 282 aaKnown RBP16.99■□□□□ 0.31
DDX41-208ENST00000507955 C17orf53Q8N3J3 647 aaPredicted RBP16.99■□□□□ 0.31
DDX41-208ENST00000507955 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
DDX41-208ENST00000507955 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
DDX41-208ENST00000507955 EPB41L4AQ9HCS5 686 aaPredicted RBP16.99■□□□□ 0.31
DDX41-208ENST00000507955 NEDD4P46934 1319 aa16.99■□□□□ 0.31
DDX41-208ENST00000507955 SMIM22K7EJ46 135 aa16.99■□□□□ 0.31
DDX41-208ENST00000507955 CCDC192P0DO97 292 aa16.99■□□□□ 0.31
DDX41-208ENST00000507955 PDIA4P13667 645 aaKnown RBP16.99■□□□□ 0.31
DDX41-208ENST00000507955 SLC5A1P13866 664 aa16.99■□□□□ 0.31
DDX41-208ENST00000507955 TYRO3Q06418 890 aa16.99■□□□□ 0.31
DDX41-208ENST00000507955 TTF1Q15361 905 aaPredicted RBP16.99■□□□□ 0.31
DDX41-208ENST00000507955 LINC00116Q8NCU8 138 aa16.99■□□□□ 0.31
DDX41-208ENST00000507955 PDCL3Q9H2J4 239 aa16.99■□□□□ 0.31
DDX41-208ENST00000507955 GOLPH3LQ9H4A5 285 aa16.99■□□□□ 0.31
DDX41-208ENST00000507955 MYH7P12883 1935 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 AHDC1Q5TGY3 1603 aaPredicted RBP16.98■□□□□ 0.31
DDX41-208ENST00000507955 CHRNDQ07001 517 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 KIAA2012Q0VF49 1180 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 UBE3CQ15386 1083 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 ERFEQ4G0M1 354 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 NAA16Q6N069 864 aaPredicted RBP16.98■□□□□ 0.31
DDX41-208ENST00000507955 ZNF512BQ96KM6 892 aaPredicted RBP16.98■□□□□ 0.31
DDX41-208ENST00000507955 FAM13BQ9NYF5 915 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 TAF1P21675 1872 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 ANO6Q4KMQ2 910 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 ZSCAN25Q6NSZ9 544 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 TICAM2Q86XR7 235 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 C8orf37Q96NL8 207 aa16.98■□□□□ 0.31
DDX41-208ENST00000507955 ORC3Q9UBD5 711 aaPredicted RBP16.98■□□□□ 0.31
DDX41-208ENST00000507955 CCDC152Q4G0S7 254 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 SPC24Q8NBT2 197 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 PHKBQ93100 1093 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 CFAP45Q9UL16 551 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 COL22A1Q8NFW1 1626 aaPredicted RBP16.97■□□□□ 0.31
DDX41-208ENST00000507955 CPLX1O14810 134 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 UQCRFS1P1P0C7P4 283 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 GYG1P46976 350 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 EVCP57679 992 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 TRDNQ13061 729 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 MICU3Q86XE3 530 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 ZKSCAN3Q9BRR0 538 aa16.97■□□□□ 0.31
DDX41-208ENST00000507955 CDCA7Q9BWT1 371 aaPredicted RBP16.97■□□□□ 0.31
DDX41-208ENST00000507955 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
DDX41-208ENST00000507955 IGHMBP2P38935 993 aaKnown RBP16.96■□□□□ 0.31
DDX41-208ENST00000507955 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
DDX41-208ENST00000507955 LCORLQ8N3X6 602 aa16.96■□□□□ 0.31
DDX41-208ENST00000507955 FBXW7Q969H0 707 aa16.96■□□□□ 0.31
DDX41-208ENST00000507955 ABCC12Q96J65 1359 aa16.96■□□□□ 0.31
DDX41-208ENST00000507955 WNK3Q9BYP7 1800 aa16.96■□□□□ 0.31
DDX41-208ENST00000507955 KIF28PB7ZC32 967 aa16.96■□□□□ 0.3
DDX41-208ENST00000507955 CDC27P30260 824 aa16.96■□□□□ 0.3
DDX41-208ENST00000507955 ME1P48163 572 aa16.96■□□□□ 0.3
DDX41-208ENST00000507955 RRP12Q5JTH9 1297 aaKnown RBP16.96■□□□□ 0.3
DDX41-208ENST00000507955 ADGRA1Q86SQ6 560 aa16.96■□□□□ 0.3
DDX41-208ENST00000507955 IFNL3Q8IZI9 196 aa16.96■□□□□ 0.3
DDX41-208ENST00000507955 CLSTN2Q9H4D0 955 aa16.96■□□□□ 0.3
DDX41-208ENST00000507955 ABCF2Q9UG63 623 aa16.96■□□□□ 0.3
DDX41-208ENST00000507955 CLIC4Q9Y696 253 aa16.96■□□□□ 0.3
DDX41-208ENST00000507955 SASS6Q6UVJ0 657 aa16.95■□□□□ 0.3
DDX41-208ENST00000507955 C8orf76Q96K31 380 aa16.95■□□□□ 0.3
DDX41-208ENST00000507955 DNAJC25Q9H1X3 360 aa16.95■□□□□ 0.3
DDX41-208ENST00000507955 SLC51AQ86UW1 340 aa16.95■□□□□ 0.3
DDX41-208ENST00000507955 TOMM22Q9NS69 142 aa16.95■□□□□ 0.3
DDX41-208ENST00000507955 RCOR1Q9UKL0 485 aa16.95■□□□□ 0.3
DDX41-208ENST00000507955 PHLPP1O60346 1717 aa16.95■□□□□ 0.3
DDX41-208ENST00000507955 MAP3K12Q12852 859 aa16.94■□□□□ 0.3
DDX41-208ENST00000507955 FBXL16Q8N461 479 aa16.94■□□□□ 0.3
DDX41-208ENST00000507955 PIBF1Q8WXW3 757 aa16.94■□□□□ 0.3
DDX41-208ENST00000507955 SRP68Q9UHB9 627 aaKnown RBP16.94■□□□□ 0.3
DDX41-208ENST00000507955 ANGEL1Q9UNK9 670 aaKnown RBP16.94■□□□□ 0.3
DDX41-208ENST00000507955 GSG1L2A8MUP6 293 aa16.94■□□□□ 0.3
DDX41-208ENST00000507955 GLIPR1L2Q4G1C9 344 aa16.94■□□□□ 0.3
DDX41-208ENST00000507955 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
DDX41-208ENST00000507955 NAPBQ9H115 298 aa16.94■□□□□ 0.3
DDX41-208ENST00000507955 CBX8Q9HC52 389 aa16.94■□□□□ 0.3
DDX41-208ENST00000507955 DDX19AQ9NUU7 478 aaKnown RBP16.94■□□□□ 0.3
DDX41-208ENST00000507955 ZSWIM5Q9P217 1185 aa16.94■□□□□ 0.3
DDX41-208ENST00000507955 LRP2BPQ9P2M1 347 aa16.94■□□□□ 0.3
DDX41-208ENST00000507955 AMIGO3Q86WK7 504 aa16.93■□□□□ 0.3
DDX41-208ENST00000507955 CCDC82Q8N4S0 544 aa16.93■□□□□ 0.3
DDX41-208ENST00000507955 SDR42E1Q8WUS8 393 aa16.93■□□□□ 0.3
DDX41-208ENST00000507955 NGLY1Q96IV0 654 aa16.93■□□□□ 0.3
DDX41-208ENST00000507955 KIF3AQ9Y496 699 aa16.93■□□□□ 0.3
DDX41-208ENST00000507955 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
DDX41-208ENST00000507955 A0A1B0GVL5 298 aa16.93■□□□□ 0.3
DDX41-208ENST00000507955 PATL2C9JE40 543 aaKnown RBP16.93■□□□□ 0.3
DDX41-208ENST00000507955 SH2B2O14492 632 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms