RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 ECHDC1Q9NTX5 307 aa11.79□□□□□ -0.52
PRPF3-207ENST00000496202 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
PRPF3-207ENST00000496202 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
PRPF3-207ENST00000496202 POTECB2RU33 542 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 ERC2O15083 957 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 ATP5JP18859 108 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 ZAP70P43403 619 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 ZNF280AP59817 542 aaPredicted RBP11.78□□□□□ -0.52
PRPF3-207ENST00000496202 NUCB1Q02818 461 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 DLGAP5Q15398 846 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 USP50Q70EL3 339 aaPredicted RBP11.78□□□□□ -0.52
PRPF3-207ENST00000496202 ERICH6Q7L0X2 663 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 CHD1LQ86WJ1 897 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 DZIP1Q86YF9 867 aaKnown RBP11.78□□□□□ -0.52
PRPF3-207ENST00000496202 MYOZ2Q9NPC6 264 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 RAI14Q9P0K7 980 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 LRP2BPQ9P2M1 347 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
PRPF3-207ENST00000496202 MYH2Q9UKX2 1941 aa11.78□□□□□ -0.52
PRPF3-207ENST00000496202 KIF3CO14782 793 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 MX1P20591 662 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 PRDX5P30044 214 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-207ENST00000496202 CENPQQ7L2Z9 268 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-207ENST00000496202 SAMD7Q7Z3H4 446 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 LDHDQ86WU2 507 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 SLF2Q8IX21 1173 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 TRPM4Q8TD43 1214 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.77□□□□□ -0.53
PRPF3-207ENST00000496202 TEKT1Q969V4 418 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 BOLA2Q9H3K6 86 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 TTC41PQ6P2S7 1318 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 MAST2Q6P0Q8 1798 aa11.77□□□□□ -0.53
PRPF3-207ENST00000496202 IDH1O75874 414 aaKnown RBP11.76□□□□□ -0.53
PRPF3-207ENST00000496202 GLRX3O76003 335 aaKnown RBP11.76□□□□□ -0.53
PRPF3-207ENST00000496202 GSTO1P78417 241 aa11.76□□□□□ -0.53
PRPF3-207ENST00000496202 CFAP100Q494V2 611 aa11.76□□□□□ -0.53
PRPF3-207ENST00000496202 TSHZ3Q63HK5 1081 aa11.76□□□□□ -0.53
PRPF3-207ENST00000496202 TBC1D9Q6ZT07 1266 aa11.76□□□□□ -0.53
PRPF3-207ENST00000496202 OTUD7AQ8TE49 926 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-207ENST00000496202 PPP4R2Q9NY27 417 aa11.76□□□□□ -0.53
PRPF3-207ENST00000496202 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-207ENST00000496202 SERPINA10Q9UK55 444 aa11.76□□□□□ -0.53
PRPF3-207ENST00000496202 ADAMTSL1Q8N6G6 1762 aa11.76□□□□□ -0.53
PRPF3-207ENST00000496202 MYO5AQ9Y4I1 1855 aaKnown RBP11.76□□□□□ -0.53
PRPF3-207ENST00000496202 ECM29Q5VYK3 1845 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 DOCK2Q92608 1830 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 GOLIM4O00461 696 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 MYO1BO43795 1136 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 CYP2E1P05181 493 aaPredicted RBP11.75□□□□□ -0.53
PRPF3-207ENST00000496202 CRKP46108 304 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 HDLBPQ00341 1268 aaKnown RBP11.75□□□□□ -0.53
PRPF3-207ENST00000496202 MAP3K12Q12852 859 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 GRIK5Q16478 980 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 SMC1BQ8NDV3 1235 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 HAUS7Q99871 368 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 PAG1Q9NWQ8 432 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 NDUFB9Q9Y6M9 179 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 MYH7P12883 1935 aa11.75□□□□□ -0.53
PRPF3-207ENST00000496202 POLR2AP24928 1970 aaKnown RBP11.75□□□□□ -0.53
PRPF3-207ENST00000496202 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
PRPF3-207ENST00000496202 TOMM70O94826 608 aa11.74□□□□□ -0.53
PRPF3-207ENST00000496202 EGFRP00533 1210 aa11.74□□□□□ -0.53
PRPF3-207ENST00000496202 LDHCP07864 332 aa11.74□□□□□ -0.53
PRPF3-207ENST00000496202 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
PRPF3-207ENST00000496202 PDE1AP54750 535 aa11.74□□□□□ -0.53
PRPF3-207ENST00000496202 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-207ENST00000496202 DIXDC1Q155Q3 683 aa11.74□□□□□ -0.53
PRPF3-207ENST00000496202 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
PRPF3-207ENST00000496202 PAXIP1Q6ZW49 1069 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-207ENST00000496202 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
PRPF3-207ENST00000496202 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
PRPF3-207ENST00000496202 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
PRPF3-207ENST00000496202 DCPSQ96C86 337 aaKnown RBP11.74□□□□□ -0.53
PRPF3-207ENST00000496202 NOL10Q9BSC4 688 aaKnown RBP11.74□□□□□ -0.53
PRPF3-207ENST00000496202 PIH1D3Q9NQM4 214 aaKnown RBP11.74□□□□□ -0.53
PRPF3-207ENST00000496202 GGA3Q9NZ52 723 aa11.74□□□□□ -0.53
PRPF3-207ENST00000496202 WNT10BO00744 389 aa11.73□□□□□ -0.53
PRPF3-207ENST00000496202 IGSF3O75054 1194 aa11.73□□□□□ -0.53
PRPF3-207ENST00000496202 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
PRPF3-207ENST00000496202 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
PRPF3-207ENST00000496202 MECOMQ03112 1051 aa11.73□□□□□ -0.53
PRPF3-207ENST00000496202 AOX1Q06278 1338 aa11.73□□□□□ -0.53
PRPF3-207ENST00000496202 NAA16Q6N069 864 aaPredicted RBP11.73□□□□□ -0.53
PRPF3-207ENST00000496202 HHIPL2Q6UWX4 724 aa11.73□□□□□ -0.53
PRPF3-207ENST00000496202 ZDHHC15Q96MV8 337 aa11.73□□□□□ -0.53
PRPF3-207ENST00000496202 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.73□□□□□ -0.538e-7■■■□□ 15.7
PRPF3-207ENST00000496202 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
PRPF3-207ENST00000496202 STAP2Q9UGK3 403 aa11.73□□□□□ -0.53
PRPF3-207ENST00000496202 AK9Q5TCS8 1911 aa11.72□□□□□ -0.53
PRPF3-207ENST00000496202 MROH7-TTC4A0A0A0MT08 1334 aa11.72□□□□□ -0.53
PRPF3-207ENST00000496202 SALL3Q9BXA9 1300 aa11.72□□□□□ -0.53
PRPF3-207ENST00000496202 HIRAP54198 1017 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-207ENST00000496202 LRRFIP1Q32MZ4 808 aaKnown RBP11.72□□□□□ -0.53
PRPF3-207ENST00000496202 NBPF9Q3BBW0 867 aa11.72□□□□□ -0.53
PRPF3-207ENST00000496202 APOBEC3FQ8IUX4 373 aaKnown RBP11.72□□□□□ -0.53
PRPF3-207ENST00000496202 SULF1Q8IWU6 871 aa11.72□□□□□ -0.53
PRPF3-207ENST00000496202 PI4K2BQ8TCG2 481 aa11.72□□□□□ -0.53
PRPF3-207ENST00000496202 EDC3Q96F86 508 aaKnown RBP11.72□□□□□ -0.53
PRPF3-207ENST00000496202 MRIQ9BWK5 157 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms