RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 RPAP2Q8IXW5 612 aaPredicted RBP13.09□□□□□ -0.31
SSBP1-210ENST00000481508 ASTN2O75129 1339 aaPredicted RBP13.09□□□□□ -0.31
SSBP1-210ENST00000481508 FAM205AQ6ZU69 1335 aa13.09□□□□□ -0.31
SSBP1-210ENST00000481508 RPS12P25398 132 aaKnown RBP13.08□□□□□ -0.32
SSBP1-210ENST00000481508 IRX6P78412 446 aaPredicted RBP13.08□□□□□ -0.32
SSBP1-210ENST00000481508 CHAF1AQ13111 956 aaPredicted RBP13.08□□□□□ -0.32
SSBP1-210ENST00000481508 OS9Q13438 667 aaPredicted RBP13.08□□□□□ -0.32
SSBP1-210ENST00000481508 TBC1D10BQ4KMP7 808 aaPredicted RBP13.08□□□□□ -0.32
SSBP1-210ENST00000481508 TNNI3KQ59H18 835 aa13.08□□□□□ -0.32
SSBP1-210ENST00000481508 PRPF38BQ5VTL8 546 aaKnown RBP13.08□□□□□ -0.32
SSBP1-210ENST00000481508 AGBL3Q8NEM8 1001 aa13.08□□□□□ -0.32
SSBP1-210ENST00000481508 DPF2Q92785 391 aa13.08□□□□□ -0.32
SSBP1-210ENST00000481508 XAGE2Q96GT9 111 aa13.08□□□□□ -0.32
SSBP1-210ENST00000481508 ADARB2Q9NS39 739 aaKnown RBP13.08□□□□□ -0.32
SSBP1-210ENST00000481508 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
SSBP1-210ENST00000481508 PCDHAC2Q9Y5I4 1007 aa13.08□□□□□ -0.32
SSBP1-210ENST00000481508 FPGT-TNNI3KV9GXZ4 949 aa13.08□□□□□ -0.32
SSBP1-210ENST00000481508 APBB1O00213 710 aa13.07□□□□□ -0.32
SSBP1-210ENST00000481508 CAVIN4Q5BKX8 364 aa13.07□□□□□ -0.32
SSBP1-210ENST00000481508 RBM26Q5T8P6 1007 aaKnown RBP13.07□□□□□ -0.32
SSBP1-210ENST00000481508 CCDC102BQ68D86 513 aa13.07□□□□□ -0.32
SSBP1-210ENST00000481508 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
SSBP1-210ENST00000481508 CNTROBQ8N137 903 aa13.07□□□□□ -0.32
SSBP1-210ENST00000481508 EXOC6Q8TAG9 804 aa13.07□□□□□ -0.32
SSBP1-210ENST00000481508 DBNDD2Q9BQY9 259 aa13.07□□□□□ -0.32
SSBP1-210ENST00000481508 BEGAINQ9BUH8 593 aa13.07□□□□□ -0.32
SSBP1-210ENST00000481508 MKI67P46013 3256 aaKnown RBP13.07□□□□□ -0.32
SSBP1-210ENST00000481508 AOX1Q06278 1338 aa13.07□□□□□ -0.32
SSBP1-210ENST00000481508 F8W031 263 aaPredicted RBP13.06□□□□□ -0.32
SSBP1-210ENST00000481508 ZNF280AP59817 542 aaPredicted RBP13.06□□□□□ -0.32
SSBP1-210ENST00000481508 KIF4BQ2VIQ3 1234 aa13.06□□□□□ -0.32
SSBP1-210ENST00000481508 VPS37DQ86XT2 251 aa13.06□□□□□ -0.32
SSBP1-210ENST00000481508 EAF2Q96CJ1 260 aaPredicted RBP13.06□□□□□ -0.32
SSBP1-210ENST00000481508 NEUROD6Q96NK8 337 aa13.06□□□□□ -0.32
SSBP1-210ENST00000481508 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
SSBP1-210ENST00000481508 IL1RAPL2Q9NP60 686 aa13.06□□□□□ -0.32
SSBP1-210ENST00000481508 H7C1D1 291 aa13.05□□□□□ -0.32
SSBP1-210ENST00000481508 USP17L8P0C7I0 530 aa13.05□□□□□ -0.32
SSBP1-210ENST00000481508 RASGRF1Q13972 1273 aa13.05□□□□□ -0.32
SSBP1-210ENST00000481508 SCARF1Q14162 830 aa13.05□□□□□ -0.32
SSBP1-210ENST00000481508 MFSD14BQ5SR56 506 aa13.05□□□□□ -0.32
SSBP1-210ENST00000481508 DLK2Q6UY11 383 aa13.05□□□□□ -0.32
SSBP1-210ENST00000481508 USP50Q70EL3 339 aaPredicted RBP13.05□□□□□ -0.32
SSBP1-210ENST00000481508 RHPN1Q8TCX5 695 aa13.05□□□□□ -0.32
SSBP1-210ENST00000481508 CCDC8Q9H0W5 538 aaPredicted RBP13.05□□□□□ -0.32
SSBP1-210ENST00000481508 DBNLQ9UJU6 430 aaKnown RBP13.05□□□□□ -0.32
SSBP1-210ENST00000481508 AKAP2Q9Y2D5 859 aa13.05□□□□□ -0.32
SSBP1-210ENST00000481508 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
SSBP1-210ENST00000481508 TRAF5O00463 557 aa13.04□□□□□ -0.32
SSBP1-210ENST00000481508 HMMRO75330 724 aa13.04□□□□□ -0.32
SSBP1-210ENST00000481508 FKBP1AP62942 108 aaKnown RBP13.04□□□□□ -0.32
SSBP1-210ENST00000481508 PI16Q6UXB8 463 aa13.04□□□□□ -0.32
SSBP1-210ENST00000481508 PNMA8AQ86V59 439 aaPredicted RBP13.04□□□□□ -0.32
SSBP1-210ENST00000481508 MYOZ2Q9NPC6 264 aa13.04□□□□□ -0.32
SSBP1-210ENST00000481508 GPR108Q9NPR9 543 aa13.04□□□□□ -0.32
SSBP1-210ENST00000481508 SCAF8Q9UPN6 1271 aaKnown RBP13.04□□□□□ -0.32
SSBP1-210ENST00000481508 MYO3BQ8WXR4 1341 aa13.04□□□□□ -0.32
SSBP1-210ENST00000481508 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
SSBP1-210ENST00000481508 NBPF9Q3BBW0 867 aa13.03□□□□□ -0.32
SSBP1-210ENST00000481508 ZBED3Q96IU2 234 aaPredicted RBP13.03□□□□□ -0.32
SSBP1-210ENST00000481508 DOCK2Q92608 1830 aa13.03□□□□□ -0.32
SSBP1-210ENST00000481508 SZT2Q5T011 3432 aa13.03□□□□□ -0.32
SSBP1-210ENST00000481508 MAST2Q6P0Q8 1798 aa13.02□□□□□ -0.32
SSBP1-210ENST00000481508 FRAT2O75474 233 aaPredicted RBP13.02□□□□□ -0.33
SSBP1-210ENST00000481508 ARID4AP29374 1257 aaPredicted RBP13.02□□□□□ -0.33
SSBP1-210ENST00000481508 MCAMP43121 646 aa13.02□□□□□ -0.33
SSBP1-210ENST00000481508 AACSQ86V21 672 aa13.02□□□□□ -0.33
SSBP1-210ENST00000481508 GLIS2Q9BZE0 524 aaPredicted RBP13.02□□□□□ -0.33
SSBP1-210ENST00000481508 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
SSBP1-210ENST00000481508 DCTPP1Q9H773 170 aa13.02□□□□□ -0.33
SSBP1-210ENST00000481508 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.33
SSBP1-210ENST00000481508 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
SSBP1-210ENST00000481508 CUL9Q8IWT3 2517 aa13.01□□□□□ -0.33
SSBP1-210ENST00000481508 ADM5C9JUS6 153 aa13.01□□□□□ -0.33
SSBP1-210ENST00000481508 WNT10BO00744 389 aa13.01□□□□□ -0.33
SSBP1-210ENST00000481508 PRDX5P30044 214 aa13.01□□□□□ -0.33
SSBP1-210ENST00000481508 CFAP100Q494V2 611 aa13.01□□□□□ -0.33
SSBP1-210ENST00000481508 CST9Q5W186 159 aa13.01□□□□□ -0.33
SSBP1-210ENST00000481508 ERC1Q8IUD2 1116 aa13.01□□□□□ -0.33
SSBP1-210ENST00000481508 GGA3Q9NZ52 723 aa13.01□□□□□ -0.33
SSBP1-210ENST00000481508 TTF2Q9UNY4 1162 aaKnown RBP13.01□□□□□ -0.33
SSBP1-210ENST00000481508 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
SSBP1-210ENST00000481508 CEP290O15078 2479 aa13□□□□□ -0.33
SSBP1-210ENST00000481508 SEMA3EO15041 775 aa13□□□□□ -0.33
SSBP1-210ENST00000481508 RAB11FIP3O75154 756 aa13□□□□□ -0.33
SSBP1-210ENST00000481508 ECE1P42892 770 aa13□□□□□ -0.33
SSBP1-210ENST00000481508 HSP90AB4PQ58FF6 505 aa13□□□□□ -0.33
SSBP1-210ENST00000481508 GORABQ5T7V8 394 aa13□□□□□ -0.33
SSBP1-210ENST00000481508 ANGEL2Q5VTE6 544 aaKnown RBP13□□□□□ -0.33
SSBP1-210ENST00000481508 KIF1BPQ96EK5 621 aa13□□□□□ -0.33
SSBP1-210ENST00000481508 SNRKQ9NRH2 765 aa13□□□□□ -0.33
SSBP1-210ENST00000481508 GNL3LQ9NVN8 582 aaKnown RBP13□□□□□ -0.33
SSBP1-210ENST00000481508 DENND2AQ9ULE3 1009 aa13□□□□□ -0.33
SSBP1-210ENST00000481508 CDK5RAP2Q96SN8 1893 aa12.99□□□□□ -0.33
SSBP1-210ENST00000481508 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
SSBP1-210ENST00000481508 CRKP46108 304 aa12.99□□□□□ -0.33
SSBP1-210ENST00000481508 TBC1D9Q6ZT07 1266 aa12.99□□□□□ -0.33
SSBP1-210ENST00000481508 OGFOD1Q8N543 542 aa12.99□□□□□ -0.33
SSBP1-210ENST00000481508 SPATA5Q8NB90 893 aa12.99□□□□□ -0.33
SSBP1-210ENST00000481508 WDR66Q8TBY9 1149 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms