RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 KIAA0825Q8IV33 1275 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 CCDC146Q8IYE0 955 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 SPAG5Q96R06 1193 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.79□□□□□ -0.525e-8■■□□□ 13.9
PRPF4B-206ENST00000481109 WDR37Q9Y2I8 494 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 GOLGA6L9A6NEM1 432 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 SESN3P58005 492 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 AKNAD1Q5T1N1 836 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 FCHSD1Q86WN1 690 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 ELOA2Q8IYF1 753 aaPredicted RBP11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 EPC1Q9H2F5 836 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 EBF2Q9HAK2 575 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 SLC40A1Q9NP59 571 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 PICK1Q9NRD5 415 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 ANKIB1Q9P2G1 1089 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 MYOM2P54296 1465 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 EIF3HO15372 352 aaKnown RBP eCLIP11.78□□□□□ -0.521e-6■■□□□ 13.8
PRPF4B-206ENST00000481109 EIF4BP23588 611 aaKnown RBP11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 TRPC1P48995 793 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 SMARCC1Q92922 1105 aaPredicted RBP11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 PHACTR1Q9C0D0 580 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 ACTR5Q9H9F9 607 aaPredicted RBP11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 ZNF510Q9Y2H8 683 aa11.78□□□□□ -0.52
PRPF4B-206ENST00000481109 LRRC10BA6NIK2 292 aa11.77□□□□□ -0.52
PRPF4B-206ENST00000481109 B4DLN1 442 aa11.77□□□□□ -0.52
PRPF4B-206ENST00000481109 ZSCAN12O43309 604 aa11.77□□□□□ -0.52
PRPF4B-206ENST00000481109 CYP11B2P19099 503 aa11.77□□□□□ -0.52
PRPF4B-206ENST00000481109 PPFIA1Q13136 1202 aa11.77□□□□□ -0.52
PRPF4B-206ENST00000481109 FAM228AQ86W67 206 aa11.77□□□□□ -0.52
PRPF4B-206ENST00000481109 AFAP1Q8N556 730 aa11.77□□□□□ -0.52
PRPF4B-206ENST00000481109 BCAS4Q8TDM0 211 aa11.77□□□□□ -0.52
PRPF4B-206ENST00000481109 DDX19AQ9NUU7 478 aaKnown RBP11.77□□□□□ -0.52
PRPF4B-206ENST00000481109 GOLGA6L7A0A1B0GV03 622 aa11.77□□□□□ -0.53
PRPF4B-206ENST00000481109 MGRN1O60291 552 aa11.77□□□□□ -0.53
PRPF4B-206ENST00000481109 YY1P25490 414 aa11.77□□□□□ -0.53
PRPF4B-206ENST00000481109 MYBPC3Q14896 1274 aa11.77□□□□□ -0.53
PRPF4B-206ENST00000481109 KIRREL3Q8IZU9 778 aa11.77□□□□□ -0.53
PRPF4B-206ENST00000481109 KCNN1Q92952 543 aa11.77□□□□□ -0.53
PRPF4B-206ENST00000481109 TSC22D3Q99576 134 aa11.77□□□□□ -0.53
PRPF4B-206ENST00000481109 A6NHS1 94 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 PUS10Q3MIT2 529 aaKnown RBP11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 KBTBD12Q3ZCT8 623 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 CYB5D1Q6P9G0 228 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 FAM81BQ96LP2 452 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 CFAP53Q96M91 514 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 ATP8A1Q9Y2Q0 1164 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 THRAP3Q9Y2W1 955 aaKnown RBP11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 SYF2O95926 243 aaKnown RBP11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 F13A1P00488 732 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 GSPT1P15170 499 aaKnown RBP11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 NEK4P51957 841 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 PSMC1P62191 440 aaKnown RBP11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 DYNC1I2Q13409 638 aaKnown RBP11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 PKN1Q16512 942 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 C16orf87Q6PH81 154 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 MYOCDQ8IZQ8 938 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 SMYD1Q8NB12 490 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 LEO1Q8WVC0 666 aaPredicted RBP11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 TNMDQ9H2S6 317 aa11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 BARX2Q9UMQ3 279 aaPredicted RBP11.76□□□□□ -0.53
PRPF4B-206ENST00000481109 BIN1O00499 593 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 KIF3BO15066 747 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 HARSP12081 509 aaKnown RBP11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 POSTNQ15063 836 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 SLC4A8Q2Y0W8 1093 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 PRPF40BQ6NWY9 871 aaKnown RBP11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 CRELD2Q6UXH1 353 aaPredicted RBP11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 ARMC9Q7Z3E5 817 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 ITPRIPQ8IWB1 547 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 CCDC13Q8IYE1 715 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 SLC35B4Q969S0 331 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 JAKMIP2Q96AA8 810 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 YIPF3Q9GZM5 350 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 KAT14Q9H8E8 782 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 ANKZF1Q9H8Y5 726 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 HOOK1Q9UJC3 728 aaKnown RBP11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 USP16Q9Y5T5 823 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 GMEB1Q9Y692 573 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 FANCGO15287 622 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 CREB3O43889 395 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 TRIM27P14373 513 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 RHBDL3P58872 404 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 BLMHQ13867 455 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 TUBB2AQ13885 445 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 ATF7IPQ6VMQ6 1270 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 GBP7Q8N8V2 638 aaPredicted RBP11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 FAM76AQ8TAV0 307 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 TUBB2BQ9BVA1 445 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 ABCB6Q9NP58 842 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 PHF24Q9UPV7 400 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 IQSEC2Q5JU85 1478 aa11.75□□□□□ -0.53
PRPF4B-206ENST00000481109 GRIN2DO15399 1336 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 NPHP3Q7Z494 1330 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 M0R2C6 588 aa11.74□□□□□ -0.53
PRPF4B-206ENST00000481109 FIBPO43427 364 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms