RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 TSHZ3Q63HK5 1081 aa19.22■□□□□ 0.67
COL1A1-204ENST00000474644 TBC1D9Q6ZT07 1266 aa19.22■□□□□ 0.67
COL1A1-204ENST00000474644 HSPA6P17066 643 aa19.21■□□□□ 0.67
COL1A1-204ENST00000474644 MX1P20591 662 aa19.21■□□□□ 0.67
COL1A1-204ENST00000474644 LDHDQ86WU2 507 aa19.21■□□□□ 0.67
COL1A1-204ENST00000474644 SERPINA10Q9UK55 444 aa19.21■□□□□ 0.67
COL1A1-204ENST00000474644 TTC41PQ6P2S7 1318 aa19.21■□□□□ 0.67
COL1A1-204ENST00000474644 MAST2Q6P0Q8 1798 aa19.2■□□□□ 0.66
COL1A1-204ENST00000474644 TOMM70O94826 608 aa19.2■□□□□ 0.66
COL1A1-204ENST00000474644 CFAP100Q494V2 611 aa19.2■□□□□ 0.66
COL1A1-204ENST00000474644 SPTY2D1Q68D10 685 aaPredicted RBP19.2■□□□□ 0.66
COL1A1-204ENST00000474644 MTMR14Q8NCE2 650 aa19.2■□□□□ 0.66
COL1A1-204ENST00000474644 ZBED3Q96IU2 234 aaPredicted RBP19.2■□□□□ 0.66
COL1A1-204ENST00000474644 DNAJC2Q99543 621 aaKnown RBP19.2■□□□□ 0.66
COL1A1-204ENST00000474644 PIH1D3Q9NQM4 214 aaKnown RBP19.2■□□□□ 0.66
COL1A1-204ENST00000474644 PCDHAC2Q9Y5I4 1007 aa19.2■□□□□ 0.66
COL1A1-204ENST00000474644 CRKP46108 304 aa19.19■□□□□ 0.66
COL1A1-204ENST00000474644 HDLBPQ00341 1268 aaKnown RBP19.19■□□□□ 0.66
COL1A1-204ENST00000474644 DLGAP5Q15398 846 aa19.19■□□□□ 0.66
COL1A1-204ENST00000474644 DIXDC1Q155Q3 683 aa19.19■□□□□ 0.66
COL1A1-204ENST00000474644 ERICH6BQ5W0A0 696 aa19.19■□□□□ 0.66
COL1A1-204ENST00000474644 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
COL1A1-204ENST00000474644 DZIP1Q86YF9 867 aaKnown RBP19.19■□□□□ 0.66
COL1A1-204ENST00000474644 RBM46Q8TBY0 533 aaKnown RBP19.19■□□□□ 0.66
COL1A1-204ENST00000474644 TEKT1Q969V4 418 aa19.19■□□□□ 0.66
COL1A1-204ENST00000474644 BOLA2Q9H3K6 86 aa19.19■□□□□ 0.66
COL1A1-204ENST00000474644 ANTXR1Q9H6X2 564 aa19.19■□□□□ 0.66
COL1A1-204ENST00000474644 ASTN2O75129 1339 aaPredicted RBP19.19■□□□□ 0.66
COL1A1-204ENST00000474644 SPDYE2BA6NHP3 402 aa19.18■□□□□ 0.66
COL1A1-204ENST00000474644 WNT10BO00744 389 aa19.18■□□□□ 0.66
COL1A1-204ENST00000474644 SPDYE6P0CI01 402 aa19.18■□□□□ 0.66
COL1A1-204ENST00000474644 RBM5P52756 815 aaKnown RBP eCLIP19.18■□□□□ 0.66
COL1A1-204ENST00000474644 MECOMQ03112 1051 aa19.18■□□□□ 0.66
COL1A1-204ENST00000474644 NBPF9Q3BBW0 867 aa19.18■□□□□ 0.66
COL1A1-204ENST00000474644 CENPQQ7L2Z9 268 aaPredicted RBP19.18■□□□□ 0.66
COL1A1-204ENST00000474644 PI4K2BQ8TCG2 481 aa19.18■□□□□ 0.66
COL1A1-204ENST00000474644 ZC3H15Q8WU90 426 aaKnown RBP19.18■□□□□ 0.66
COL1A1-204ENST00000474644 HAUS7Q99871 368 aa19.18■□□□□ 0.66
COL1A1-204ENST00000474644 RAI14Q9P0K7 980 aa19.18■□□□□ 0.66
COL1A1-204ENST00000474644 LRP2BPQ9P2M1 347 aa19.18■□□□□ 0.66
COL1A1-204ENST00000474644 CLEC11AQ9Y240 323 aa19.18■□□□□ 0.66
COL1A1-204ENST00000474644 GOLIM4O00461 696 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 CHADLQ6NUI6 762 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 HHIPL2Q6UWX4 724 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 ZNF384Q8TF68 577 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 NSUN4Q96CB9 384 aaKnown RBP19.17■□□□□ 0.66
COL1A1-204ENST00000474644 EDC3Q96F86 508 aaKnown RBP19.17■□□□□ 0.66
COL1A1-204ENST00000474644 CCDC136Q96JN2 1154 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 MRIQ9BWK5 157 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 PAG1Q9NWQ8 432 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 GGA3Q9NZ52 723 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 STAP2Q9UGK3 403 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 PGAP2Q9UHJ9 254 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 AOX1Q06278 1338 aa19.17■□□□□ 0.66
COL1A1-204ENST00000474644 DOCK2Q92608 1830 aa19.16■□□□□ 0.66
COL1A1-204ENST00000474644 ERC2O15083 957 aa19.16■□□□□ 0.66
COL1A1-204ENST00000474644 PDE1AP54750 535 aa19.16■□□□□ 0.66
COL1A1-204ENST00000474644 TTF1Q15361 905 aaPredicted RBP19.16■□□□□ 0.66
COL1A1-204ENST00000474644 SMC1BQ8NDV3 1235 aa19.16■□□□□ 0.66
COL1A1-204ENST00000474644 ZDHHC15Q96MV8 337 aa19.16■□□□□ 0.66
COL1A1-204ENST00000474644 DAGLAQ9Y4D2 1042 aa19.16■□□□□ 0.66
COL1A1-204ENST00000474644 IDH1O75874 414 aaKnown RBP19.15■□□□□ 0.66
COL1A1-204ENST00000474644 GLRX3O76003 335 aaKnown RBP19.15■□□□□ 0.66
COL1A1-204ENST00000474644 PDE4AP27815 886 aa19.15■□□□□ 0.66
COL1A1-204ENST00000474644 ANGEL2Q5VTE6 544 aaKnown RBP19.15■□□□□ 0.66
COL1A1-204ENST00000474644 MAP1SQ66K74 1059 aaPredicted RBP19.15■□□□□ 0.66
COL1A1-204ENST00000474644 PRMT6Q96LA8 375 aaPredicted RBP19.15■□□□□ 0.66
COL1A1-204ENST00000474644 GAKO14976 1311 aa19.15■□□□□ 0.66
COL1A1-204ENST00000474644 IGSF3O75054 1194 aa19.14■□□□□ 0.65
COL1A1-204ENST00000474644 PLEKHM2Q8IWE5 1019 aa19.14■□□□□ 0.65
COL1A1-204ENST00000474644 MROH7-TTC4A0A0A0MT08 1334 aa19.14■□□□□ 0.65
COL1A1-204ENST00000474644 GSTO1P78417 241 aa19.13■□□□□ 0.65
COL1A1-204ENST00000474644 FSTL1Q12841 308 aa19.13■□□□□ 0.65
COL1A1-204ENST00000474644 APOBEC3HQ6NTF7 200 aaKnown RBP19.13■□□□□ 0.65
COL1A1-204ENST00000474644 SLF2Q8IX21 1173 aa19.13■□□□□ 0.65
COL1A1-204ENST00000474644 PPP4R2Q9NY27 417 aa19.13■□□□□ 0.65
COL1A1-204ENST00000474644 PITPNM2Q9BZ72 1349 aa19.13■□□□□ 0.65
COL1A1-204ENST00000474644 ECM29Q5VYK3 1845 aa19.12■□□□□ 0.65
COL1A1-204ENST00000474644 CLRN2A0PK11 232 aa19.12■□□□□ 0.65
COL1A1-204ENST00000474644 MYO1BO43795 1136 aa19.12■□□□□ 0.65
COL1A1-204ENST00000474644 MAP3K12Q12852 859 aa19.12■□□□□ 0.65
COL1A1-204ENST00000474644 SPDYE2Q495Y8 402 aa19.12■□□□□ 0.65
COL1A1-204ENST00000474644 NAA16Q6N069 864 aaPredicted RBP19.12■□□□□ 0.65
COL1A1-204ENST00000474644 CNTROBQ8N137 903 aa19.12■□□□□ 0.65
COL1A1-204ENST00000474644 DCPSQ96C86 337 aaKnown RBP19.12■□□□□ 0.65
COL1A1-204ENST00000474644 FAM163AQ96GL9 167 aaPredicted RBP19.12■□□□□ 0.65
COL1A1-204ENST00000474644 TDRD3Q9H7E2 651 aaKnown RBP19.12■□□□□ 0.65
COL1A1-204ENST00000474644 MYO5AQ9Y4I1 1855 aaKnown RBP19.11■□□□□ 0.65
COL1A1-204ENST00000474644 MAP4K4O95819 1239 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-204ENST00000474644 ADGRA1Q86SQ6 560 aa19.11■□□□□ 0.65
COL1A1-204ENST00000474644 MAGEB6Q8N7X4 407 aa19.11■□□□□ 0.65
COL1A1-204ENST00000474644 GLIS2Q9BZE0 524 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-204ENST00000474644 OSBPL3Q9H4L5 887 aa19.11■□□□□ 0.65
COL1A1-204ENST00000474644 ZNF70Q9UC06 446 aaPredicted RBP19.11■□□□□ 0.65
COL1A1-204ENST00000474644 ADM5C9JUS6 153 aa19.1■□□□□ 0.65
COL1A1-204ENST00000474644 LDHCP07864 332 aa19.1■□□□□ 0.65
COL1A1-204ENST00000474644 PDE6AP16499 860 aa19.1■□□□□ 0.65
COL1A1-204ENST00000474644 BTDP43251 543 aa19.1■□□□□ 0.65
COL1A1-204ENST00000474644 KRT26Q7Z3Y9 468 aa19.1■□□□□ 0.65
COL1A1-204ENST00000474644 APOBEC3FQ8IUX4 373 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms