RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 ZBED9Q6R2W3 1325 aa23.52■■□□□ 1.36
COMMD1-207ENST00000471704 LAMB1P07942 1786 aa23.52■■□□□ 1.36
COMMD1-207ENST00000471704 NOM1Q5C9Z4 860 aaKnown RBP23.51■■□□□ 1.35
COMMD1-207ENST00000471704 VPS37DQ86XT2 251 aa23.51■■□□□ 1.35
COMMD1-207ENST00000471704 DZIP1LQ8IYY4 767 aaKnown RBP23.51■■□□□ 1.35
COMMD1-207ENST00000471704 CFHR5Q9BXR6 569 aa23.51■■□□□ 1.35
COMMD1-207ENST00000471704 SIL1Q9H173 461 aa23.51■■□□□ 1.35
COMMD1-207ENST00000471704 PA2G4Q9UQ80 394 aaKnown RBP23.51■■□□□ 1.35
COMMD1-207ENST00000471704 TBC1D8O95759 1140 aa23.5■■□□□ 1.35
COMMD1-207ENST00000471704 BCAMP50895 628 aa23.5■■□□□ 1.35
COMMD1-207ENST00000471704 SREBF2Q12772 1141 aa23.5■■□□□ 1.35
COMMD1-207ENST00000471704 PUM3Q15397 648 aaKnown RBP23.5■■□□□ 1.35
COMMD1-207ENST00000471704 CAVIN4Q5BKX8 364 aa23.5■■□□□ 1.35
COMMD1-207ENST00000471704 CTU1Q7Z7A3 348 aaKnown RBP23.5■■□□□ 1.35
COMMD1-207ENST00000471704 SLC10A4Q96EP9 437 aa23.5■■□□□ 1.35
COMMD1-207ENST00000471704 CLMNQ96JQ2 1002 aa23.5■■□□□ 1.35
COMMD1-207ENST00000471704 USP2O75604 605 aaPredicted RBP23.49■■□□□ 1.35
COMMD1-207ENST00000471704 CRKP46108 304 aa23.49■■□□□ 1.35
COMMD1-207ENST00000471704 HDLBPQ00341 1268 aaKnown RBP23.49■■□□□ 1.35
COMMD1-207ENST00000471704 TBC1D22AQ8WUA7 517 aa23.49■■□□□ 1.35
COMMD1-207ENST00000471704 CLUAP1Q96AJ1 413 aa23.49■■□□□ 1.35
COMMD1-207ENST00000471704 TDRD3Q9H7E2 651 aaKnown RBP23.49■■□□□ 1.35
COMMD1-207ENST00000471704 IPO8O15397 1037 aaKnown RBP23.48■■□□□ 1.35
COMMD1-207ENST00000471704 CIAO1O76071 339 aa23.48■■□□□ 1.35
COMMD1-207ENST00000471704 TNFAIP1Q13829 316 aa23.48■■□□□ 1.35
COMMD1-207ENST00000471704 ZNF296Q8WUU4 475 aaPredicted RBP23.48■■□□□ 1.35
COMMD1-207ENST00000471704 TEPSINQ96N21 525 aa23.48■■□□□ 1.35
COMMD1-207ENST00000471704 ZBTB48P10074 688 aaPredicted RBP23.47■■□□□ 1.35
COMMD1-207ENST00000471704 WNK4Q96J92 1243 aa23.47■■□□□ 1.35
COMMD1-207ENST00000471704 MRIQ9BWK5 157 aa23.47■■□□□ 1.35
COMMD1-207ENST00000471704 FBXO3Q9UK99 471 aa23.47■■□□□ 1.35
COMMD1-207ENST00000471704 MANSC4A6NHS7 340 aaPredicted RBP23.46■■□□□ 1.35
COMMD1-207ENST00000471704 GPR25O00155 361 aa23.46■■□□□ 1.35
COMMD1-207ENST00000471704 GNAI3P08754 354 aa23.46■■□□□ 1.35
COMMD1-207ENST00000471704 IFIT1P09914 478 aaKnown RBP23.46■■□□□ 1.35
COMMD1-207ENST00000471704 IREB2P48200 963 aaKnown RBP23.46■■□□□ 1.35
COMMD1-207ENST00000471704 INHBEP58166 350 aa23.46■■□□□ 1.35
COMMD1-207ENST00000471704 CHAF1AQ13111 956 aaPredicted RBP23.46■■□□□ 1.35
COMMD1-207ENST00000471704 TMEM57Q8N5G2 664 aa23.46■■□□□ 1.35
COMMD1-207ENST00000471704 R3HDMLQ9H3Y0 253 aa23.46■■□□□ 1.35
COMMD1-207ENST00000471704 COPRSQ9NQ92 184 aa23.46■■□□□ 1.35
COMMD1-207ENST00000471704 MLLT1Q03111 559 aaPredicted RBP23.45■■□□□ 1.34
COMMD1-207ENST00000471704 MTX1Q13505 466 aa23.45■■□□□ 1.34
COMMD1-207ENST00000471704 ZKSCAN2Q63HK3 967 aa23.45■■□□□ 1.34
COMMD1-207ENST00000471704 LPIN2Q92539 896 aa23.45■■□□□ 1.34
COMMD1-207ENST00000471704 SUGT1Q9Y2Z0 365 aa23.45■■□□□ 1.34
COMMD1-207ENST00000471704 OTOFQ9HC10 1997 aa23.45■■□□□ 1.34
COMMD1-207ENST00000471704 FRAT2O75474 233 aaPredicted RBP23.44■■□□□ 1.34
COMMD1-207ENST00000471704 SLC5A1P13866 664 aa23.44■■□□□ 1.34
COMMD1-207ENST00000471704 CDAN1Q8IWY9 1227 aa23.44■■□□□ 1.34
COMMD1-207ENST00000471704 ANKRD13AQ8IZ07 590 aa23.44■■□□□ 1.34
COMMD1-207ENST00000471704 HDAC5Q9UQL6 1122 aa23.44■■□□□ 1.34
COMMD1-207ENST00000471704 TNRC18O15417 2968 aaPredicted RBP23.43■■□□□ 1.34
COMMD1-207ENST00000471704 ALDH1A1P00352 501 aa23.43■■□□□ 1.34
COMMD1-207ENST00000471704 GJA5P36382 358 aa23.43■■□□□ 1.34
COMMD1-207ENST00000471704 IL15P40933 162 aaPredicted RBP23.43■■□□□ 1.34
COMMD1-207ENST00000471704 IFNL1Q8IU54 200 aa23.43■■□□□ 1.34
COMMD1-207ENST00000471704 TEKT1Q969V4 418 aa23.43■■□□□ 1.34
COMMD1-207ENST00000471704 ZDHHC15Q96MV8 337 aa23.43■■□□□ 1.34
COMMD1-207ENST00000471704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.43■■□□□ 1.34
COMMD1-207ENST00000471704 TCP10L2B9ZVM9 353 aa23.42■■□□□ 1.34
COMMD1-207ENST00000471704 SRGAP3O43295 1099 aa23.42■■□□□ 1.34
COMMD1-207ENST00000471704 PKN2Q16513 984 aaKnown RBP23.42■■□□□ 1.34
COMMD1-207ENST00000471704 ATP2B3Q16720 1220 aa23.42■■□□□ 1.34
COMMD1-207ENST00000471704 TMEM39BQ9GZU3 492 aa23.42■■□□□ 1.34
COMMD1-207ENST00000471704 IGF2BP3O00425 579 aaKnown RBP eCLIP23.41■■□□□ 1.34
COMMD1-207ENST00000471704 RLBP1P12271 317 aa23.41■■□□□ 1.34
COMMD1-207ENST00000471704 APOBEC3HQ6NTF7 200 aaKnown RBP23.41■■□□□ 1.34
COMMD1-207ENST00000471704 CEP126Q9P2H0 1117 aa23.41■■□□□ 1.34
COMMD1-207ENST00000471704 PNMA6EA0A0J9YXQ4 647 aa23.4■■□□□ 1.34
COMMD1-207ENST00000471704 TNNI2P48788 182 aa23.4■■□□□ 1.34
COMMD1-207ENST00000471704 HHIPL2Q6UWX4 724 aa23.4■■□□□ 1.34
COMMD1-207ENST00000471704 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.4■■□□□ 1.34
COMMD1-207ENST00000471704 TESPA1A2RU30 521 aaPredicted RBP23.39■■□□□ 1.33
COMMD1-207ENST00000471704 FKTNO75072 461 aa23.39■■□□□ 1.33
COMMD1-207ENST00000471704 GNAI2P04899 355 aa23.39■■□□□ 1.33
COMMD1-207ENST00000471704 ADORA1P30542 326 aa23.39■■□□□ 1.33
COMMD1-207ENST00000471704 FKBP1CQ5VVH2 108 aa23.39■■□□□ 1.33
COMMD1-207ENST00000471704 WDR66Q8TBY9 1149 aa23.39■■□□□ 1.33
COMMD1-207ENST00000471704 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.39■■□□□ 1.33
COMMD1-207ENST00000471704 HPS5Q9UPZ3 1129 aa23.39■■□□□ 1.33
COMMD1-207ENST00000471704 MAST3O60307 1309 aa23.38■■□□□ 1.33
COMMD1-207ENST00000471704 PHKA1P46020 1223 aa23.38■■□□□ 1.33
COMMD1-207ENST00000471704 FAM83AQ86UY5 434 aa23.38■■□□□ 1.33
COMMD1-207ENST00000471704 ZBTB22O15209 634 aa23.37■■□□□ 1.33
COMMD1-207ENST00000471704 CACNB3P54284 484 aa23.37■■□□□ 1.33
COMMD1-207ENST00000471704 MAP3K9P80192 1104 aa23.37■■□□□ 1.33
COMMD1-207ENST00000471704 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.37■■□□□ 1.33
COMMD1-207ENST00000471704 PTPN18Q99952 460 aa23.37■■□□□ 1.33
COMMD1-207ENST00000471704 ELP3Q9H9T3 547 aa23.37■■□□□ 1.33
COMMD1-207ENST00000471704 TIMM10P62072 90 aa23.36■■□□□ 1.33
COMMD1-207ENST00000471704 TFCP2Q12800 502 aa23.36■■□□□ 1.33
COMMD1-207ENST00000471704 OPTNQ96CV9 577 aa23.36■■□□□ 1.33
COMMD1-207ENST00000471704 MS4A4AQ96JQ5 239 aa23.36■■□□□ 1.33
COMMD1-207ENST00000471704 MYH2Q9UKX2 1941 aa23.35■■□□□ 1.33
COMMD1-207ENST00000471704 HTTP42858 3142 aa23.35■■□□□ 1.33
COMMD1-207ENST00000471704 VGLL4Q14135 290 aa23.35■■□□□ 1.33
COMMD1-207ENST00000471704 SOX10P56693 466 aa23.34■■□□□ 1.33
COMMD1-207ENST00000471704 CCDC102BQ68D86 513 aa23.34■■□□□ 1.33
COMMD1-207ENST00000471704 FBXO46Q6PJ61 603 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms