RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 LRRC14Q15048 493 aa11.18□□□□□ -0.62
ITGA4-205ENST00000468948 ADAMTSL4Q6UY14 1074 aa11.18□□□□□ -0.62
ITGA4-205ENST00000468948 NANOS1Q8WY41 292 aaKnown RBP11.18□□□□□ -0.62
ITGA4-205ENST00000468948 MRFAP1L1Q96HT8 127 aa11.18□□□□□ -0.62
ITGA4-205ENST00000468948 TRIM33Q9UPN9 1127 aa11.18□□□□□ -0.62
ITGA4-205ENST00000468948 CDK11AQ9UQ88 783 aaPredicted RBP11.18□□□□□ -0.62
ITGA4-205ENST00000468948 MX2P20592 715 aa11.17□□□□□ -0.62
ITGA4-205ENST00000468948 MCM4P33991 863 aa11.17□□□□□ -0.62
ITGA4-205ENST00000468948 SERINC3Q13530 473 aa11.17□□□□□ -0.62
ITGA4-205ENST00000468948 DIEXFQ68CQ4 756 aaKnown RBP11.17□□□□□ -0.62
ITGA4-205ENST00000468948 ZNF746Q6NUN9 644 aaPredicted RBP11.17□□□□□ -0.62
ITGA4-205ENST00000468948 CCDC81Q6ZN84 652 aa11.17□□□□□ -0.62
ITGA4-205ENST00000468948 SULF2Q8IWU5 870 aa11.17□□□□□ -0.62
ITGA4-205ENST00000468948 LRRC3Q9BY71 257 aa11.17□□□□□ -0.62
ITGA4-205ENST00000468948 TRIM55Q9BYV6 548 aa11.17□□□□□ -0.62
ITGA4-205ENST00000468948 CBX8Q9HC52 389 aa11.17□□□□□ -0.62
ITGA4-205ENST00000468948 SH2B1Q9NRF2 756 aaPredicted RBP11.17□□□□□ -0.62
ITGA4-205ENST00000468948 NAGPAQ9UK23 515 aa11.17□□□□□ -0.62
ITGA4-205ENST00000468948 PPT2Q9UMR5 302 aa11.17□□□□□ -0.62
ITGA4-205ENST00000468948 ARNTP27540 789 aa11.16□□□□□ -0.62
ITGA4-205ENST00000468948 SEPT6Q14141 434 aa11.16□□□□□ -0.62
ITGA4-205ENST00000468948 MPP2Q14168 576 aa11.16□□□□□ -0.62
ITGA4-205ENST00000468948 LLGL2Q6P1M3 1020 aa11.16□□□□□ -0.62
ITGA4-205ENST00000468948 STK35Q8TDR2 534 aa11.16□□□□□ -0.62
ITGA4-205ENST00000468948 EMILIN2Q9BXX0 1053 aa11.16□□□□□ -0.62
ITGA4-205ENST00000468948 KLF15Q9UIH9 416 aa11.16□□□□□ -0.62
ITGA4-205ENST00000468948 R3HCC1Q9Y3T6 440 aaKnown RBP11.16□□□□□ -0.62
ITGA4-205ENST00000468948 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
ITGA4-205ENST00000468948 FAM221AA4D161 298 aa11.15□□□□□ -0.62
ITGA4-205ENST00000468948 U2SURPO15042 1029 aaKnown RBP11.15□□□□□ -0.62
ITGA4-205ENST00000468948 KLF4O43474 513 aa11.15□□□□□ -0.62
ITGA4-205ENST00000468948 ARAFP10398 606 aa11.15□□□□□ -0.62
ITGA4-205ENST00000468948 ESRRAP11474 423 aaPredicted RBP11.15□□□□□ -0.62
ITGA4-205ENST00000468948 ADH6P28332 368 aa11.15□□□□□ -0.62
ITGA4-205ENST00000468948 CWF19L2Q2TBE0 894 aaKnown RBP11.15□□□□□ -0.62
ITGA4-205ENST00000468948 SDE2Q6IQ49 451 aa11.15□□□□□ -0.62
ITGA4-205ENST00000468948 LPIN3Q9BQK8 851 aa11.15□□□□□ -0.62
ITGA4-205ENST00000468948 SIRPGQ9P1W8 387 aa11.15□□□□□ -0.62
ITGA4-205ENST00000468948 PRKAG3Q9UGI9 489 aa11.15□□□□□ -0.62
ITGA4-205ENST00000468948 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
ITGA4-205ENST00000468948 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
ITGA4-205ENST00000468948 CDC27P30260 824 aa11.14□□□□□ -0.63
ITGA4-205ENST00000468948 RAB33AQ14088 237 aa11.14□□□□□ -0.63
ITGA4-205ENST00000468948 IKBKEQ14164 716 aa11.14□□□□□ -0.63
ITGA4-205ENST00000468948 GDF6Q6KF10 455 aaPredicted RBP11.14□□□□□ -0.63
ITGA4-205ENST00000468948 GRIN3AQ8TCU5 1115 aa11.14□□□□□ -0.63
ITGA4-205ENST00000468948 DDX54Q8TDD1 881 aaKnown RBP11.14□□□□□ -0.63
ITGA4-205ENST00000468948 HNRNPLLQ8WVV9 542 aaKnown RBP11.14□□□□□ -0.63
ITGA4-205ENST00000468948 MKL1Q969V6 931 aa11.14□□□□□ -0.63
ITGA4-205ENST00000468948 SHDQ96IW2 340 aa11.14□□□□□ -0.63
ITGA4-205ENST00000468948 FRRS1LQ9P0K9 344 aa11.14□□□□□ -0.63
ITGA4-205ENST00000468948 CILPO75339 1184 aa11.13□□□□□ -0.63
ITGA4-205ENST00000468948 ZNF165P49910 485 aa11.13□□□□□ -0.63
ITGA4-205ENST00000468948 CABP4P57796 275 aa11.13□□□□□ -0.63
ITGA4-205ENST00000468948 FBXW10Q5XX13 1052 aa11.13□□□□□ -0.63
ITGA4-205ENST00000468948 FERD3LQ96RJ6 166 aa11.13□□□□□ -0.63
ITGA4-205ENST00000468948 ANKRD62A6NC57 917 aa11.12□□□□□ -0.63
ITGA4-205ENST00000468948 SMAD7O15105 426 aaKnown RBP11.12□□□□□ -0.63
ITGA4-205ENST00000468948 BPNT1O95861 308 aa11.12□□□□□ -0.63
ITGA4-205ENST00000468948 NCLP19338 710 aaKnown RBP11.12□□□□□ -0.63
ITGA4-205ENST00000468948 EIF6P56537 245 aaKnown RBP11.12□□□□□ -0.63
ITGA4-205ENST00000468948 PSAPL1Q6NUJ1 521 aa11.12□□□□□ -0.63
ITGA4-205ENST00000468948 BRMS1Q9HCU9 246 aa11.12□□□□□ -0.63
ITGA4-205ENST00000468948 NEURL1BA8MQ27 555 aa11.11□□□□□ -0.63
ITGA4-205ENST00000468948 TTC9Q92623 222 aa11.11□□□□□ -0.63
ITGA4-205ENST00000468948 CRBNQ96SW2 442 aa11.11□□□□□ -0.63
ITGA4-205ENST00000468948 NSFL1CQ9UNZ2 370 aaKnown RBP11.11□□□□□ -0.63
ITGA4-205ENST00000468948 SOX1O00570 391 aaPredicted RBP11.1□□□□□ -0.63
ITGA4-205ENST00000468948 EPHA1P21709 976 aa11.1□□□□□ -0.63
ITGA4-205ENST00000468948 GAS6Q14393 721 aa11.1□□□□□ -0.63
ITGA4-205ENST00000468948 TNNI3KQ59H18 835 aa11.1□□□□□ -0.63
ITGA4-205ENST00000468948 GK5Q6ZS86 529 aa11.1□□□□□ -0.63
ITGA4-205ENST00000468948 REC114Q7Z4M0 266 aa11.1□□□□□ -0.63
ITGA4-205ENST00000468948 JAZF1Q86VZ6 243 aa11.1□□□□□ -0.63
ITGA4-205ENST00000468948 FCHSD1Q86WN1 690 aa11.1□□□□□ -0.63
ITGA4-205ENST00000468948 REXO1Q8N1G1 1221 aaKnown RBP11.1□□□□□ -0.63
ITGA4-205ENST00000468948 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
ITGA4-205ENST00000468948 SRPK1Q96SB4 655 aaKnown RBP11.1□□□□□ -0.63
ITGA4-205ENST00000468948 MDFIQ99750 246 aa11.1□□□□□ -0.63
ITGA4-205ENST00000468948 ELOA3CA0A087WX78 387 aaPredicted RBP11.09□□□□□ -0.63
ITGA4-205ENST00000468948 ELOA3DA6NLF2 546 aaPredicted RBP11.09□□□□□ -0.63
ITGA4-205ENST00000468948 RGS9O75916 674 aaPredicted RBP11.09□□□□□ -0.63
ITGA4-205ENST00000468948 MAP2K3P46734 347 aa11.09□□□□□ -0.63
ITGA4-205ENST00000468948 GIPRP48546 466 aa11.09□□□□□ -0.63
ITGA4-205ENST00000468948 ZNF252P-AS1Q0IIN9 211 aa11.09□□□□□ -0.63
ITGA4-205ENST00000468948 ELOA3BQ3SY89 546 aa11.09□□□□□ -0.63
ITGA4-205ENST00000468948 ZNF662Q6ZS27 426 aa11.09□□□□□ -0.63
ITGA4-205ENST00000468948 CACTIN-AS1Q8N1I8 211 aa11.09□□□□□ -0.63
ITGA4-205ENST00000468948 ELOA3Q8NG57 546 aa11.09□□□□□ -0.63
ITGA4-205ENST00000468948 GAL3ST3Q96A11 431 aa11.09□□□□□ -0.63
ITGA4-205ENST00000468948 PPM1GO15355 546 aaPredicted RBP11.08□□□□□ -0.64
ITGA4-205ENST00000468948 ALAS2P22557 587 aa11.08□□□□□ -0.64
ITGA4-205ENST00000468948 CDC25BP30305 580 aa11.08□□□□□ -0.64
ITGA4-205ENST00000468948 RPL6Q02878 288 aaKnown RBP11.08□□□□□ -0.64
ITGA4-205ENST00000468948 CLCQ05315 142 aa11.08□□□□□ -0.64
ITGA4-205ENST00000468948 PTPN11Q06124 597 aaPredicted RBP11.08□□□□□ -0.64
ITGA4-205ENST00000468948 AP3B2Q13367 1082 aa11.08□□□□□ -0.64
ITGA4-205ENST00000468948 SCARA3Q6AZY7 606 aa11.08□□□□□ -0.64
ITGA4-205ENST00000468948 FAM169BQ8N8A8 192 aa11.08□□□□□ -0.64
ITGA4-205ENST00000468948 NUDT8Q8WV74 236 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms