RNA–Protein interactions for RNA: ENST00000395736.7

TOM1-202, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-202ENST00000395736 UBE2Q2LH0YL09 131 aa13.79□□□□□ -0.2
TOM1-202ENST00000395736 EYA2O00167 538 aa13.79□□□□□ -0.2
TOM1-202ENST00000395736 TBC1D8O95759 1140 aa13.79□□□□□ -0.2
TOM1-202ENST00000395736 FZD1Q9UP38 647 aa13.79□□□□□ -0.2
TOM1-202ENST00000395736 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
TOM1-202ENST00000395736 BCAR3O75815 825 aa13.78□□□□□ -0.2
TOM1-202ENST00000395736 TRIM27P14373 513 aa13.78□□□□□ -0.2
TOM1-202ENST00000395736 BCAMP50895 628 aa13.78□□□□□ -0.2
TOM1-202ENST00000395736 PUM3Q15397 648 aaKnown RBP13.78□□□□□ -0.2
TOM1-202ENST00000395736 INTS3Q68E01 1043 aaKnown RBP13.78□□□□□ -0.2
TOM1-202ENST00000395736 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
TOM1-202ENST00000395736 DEFB129Q9H1M3 183 aa13.78□□□□□ -0.2
TOM1-202ENST00000395736 VCANP13611 3396 aa13.77□□□□□ -0.21
TOM1-202ENST00000395736 CHAF1AQ13111 956 aaPredicted RBP13.77□□□□□ -0.21
TOM1-202ENST00000395736 OTUD5Q96G74 571 aa13.77□□□□□ -0.21
TOM1-202ENST00000395736 SIL1Q9H173 461 aa13.77□□□□□ -0.21
TOM1-202ENST00000395736 TTF2Q9UNY4 1162 aaKnown RBP13.77□□□□□ -0.21
TOM1-202ENST00000395736 PA2G4Q9UQ80 394 aaKnown RBP13.77□□□□□ -0.21
TOM1-202ENST00000395736 CIAO1O76071 339 aa13.76□□□□□ -0.21
TOM1-202ENST00000395736 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
TOM1-202ENST00000395736 PRKG1Q13976 671 aa13.76□□□□□ -0.21
TOM1-202ENST00000395736 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
TOM1-202ENST00000395736 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
TOM1-202ENST00000395736 CDAN1Q8IWY9 1227 aa13.76□□□□□ -0.21
TOM1-202ENST00000395736 VEZTQ9HBM0 779 aa13.76□□□□□ -0.21
TOM1-202ENST00000395736 SERPINA10Q9UK55 444 aa13.76□□□□□ -0.21
TOM1-202ENST00000395736 NF2P35240 595 aa13.75□□□□□ -0.21
TOM1-202ENST00000395736 CRKP46108 304 aa13.75□□□□□ -0.21
TOM1-202ENST00000395736 RBM5P52756 815 aaKnown RBP eCLIP13.75□□□□□ -0.21
TOM1-202ENST00000395736 TTLL12Q14166 644 aaPredicted RBP13.75□□□□□ -0.21
TOM1-202ENST00000395736 LDLRAD1Q5T700 205 aa13.75□□□□□ -0.21
TOM1-202ENST00000395736 ATF7IPQ6VMQ6 1270 aa13.75□□□□□ -0.21
TOM1-202ENST00000395736 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
TOM1-202ENST00000395736 LPIN2Q92539 896 aa13.75□□□□□ -0.21
TOM1-202ENST00000395736 R3HDMLQ9H3Y0 253 aa13.75□□□□□ -0.21
TOM1-202ENST00000395736 PPP2R3BQ9Y5P8 575 aa13.75□□□□□ -0.21
TOM1-202ENST00000395736 GPR25O00155 361 aa13.74□□□□□ -0.21
TOM1-202ENST00000395736 MYO1BO43795 1136 aa13.74□□□□□ -0.21
TOM1-202ENST00000395736 IFIT1P09914 478 aaKnown RBP13.74□□□□□ -0.21
TOM1-202ENST00000395736 EN2P19622 333 aaPredicted RBP13.74□□□□□ -0.21
TOM1-202ENST00000395736 RASA3Q14644 834 aa13.74□□□□□ -0.21
TOM1-202ENST00000395736 NBPF12Q5TAG4 269 aaPredicted RBP13.74□□□□□ -0.21
TOM1-202ENST00000395736 DZIP1LQ8IYY4 767 aaKnown RBP13.74□□□□□ -0.21
TOM1-202ENST00000395736 TDRD3Q9H7E2 651 aaKnown RBP13.74□□□□□ -0.21
TOM1-202ENST00000395736 COPRSQ9NQ92 184 aa13.74□□□□□ -0.21
TOM1-202ENST00000395736 ZNF70Q9UC06 446 aaPredicted RBP13.74□□□□□ -0.21
TOM1-202ENST00000395736 FBXO3Q9UK99 471 aa13.74□□□□□ -0.21
TOM1-202ENST00000395736 ANGEL1Q9UNK9 670 aaKnown RBP13.74□□□□□ -0.21
TOM1-202ENST00000395736 SLC5A1P13866 664 aa13.73□□□□□ -0.21
TOM1-202ENST00000395736 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
TOM1-202ENST00000395736 MTX1Q13505 466 aa13.73□□□□□ -0.21
TOM1-202ENST00000395736 MAP3K11Q16584 847 aa13.73□□□□□ -0.21
TOM1-202ENST00000395736 ATP2B3Q16720 1220 aa13.73□□□□□ -0.21
TOM1-202ENST00000395736 TBC1D22AQ8WUA7 517 aa13.73□□□□□ -0.21
TOM1-202ENST00000395736 FRAT1Q92837 279 aaPredicted RBP13.73□□□□□ -0.21
TOM1-202ENST00000395736 CLUAP1Q96AJ1 413 aa13.73□□□□□ -0.21
TOM1-202ENST00000395736 CLMNQ96JQ2 1002 aa13.73□□□□□ -0.21
TOM1-202ENST00000395736 TEPSINQ96N21 525 aa13.73□□□□□ -0.21
TOM1-202ENST00000395736 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.73□□□□□ -0.21
TOM1-202ENST00000395736 FRAT2O75474 233 aaPredicted RBP13.72□□□□□ -0.21
TOM1-202ENST00000395736 GNAI3P08754 354 aa13.72□□□□□ -0.21
TOM1-202ENST00000395736 IL15P40933 162 aaPredicted RBP13.72□□□□□ -0.21
TOM1-202ENST00000395736 ARMC9Q7Z3E5 817 aa13.72□□□□□ -0.21
TOM1-202ENST00000395736 SRGAP3O43295 1099 aa13.71□□□□□ -0.21
TOM1-202ENST00000395736 ADORA1P30542 326 aa13.71□□□□□ -0.21
TOM1-202ENST00000395736 PHKA1P46020 1223 aa13.71□□□□□ -0.21
TOM1-202ENST00000395736 CACNB3P54284 484 aa13.71□□□□□ -0.21
TOM1-202ENST00000395736 HDLBPQ00341 1268 aaKnown RBP13.71□□□□□ -0.21
TOM1-202ENST00000395736 TMEM57Q8N5G2 664 aa13.71□□□□□ -0.21
TOM1-202ENST00000395736 CEP126Q9P2H0 1117 aa13.71□□□□□ -0.21
TOM1-202ENST00000395736 SPTBN5Q9NRC6 3674 aaKnown RBP13.71□□□□□ -0.22
TOM1-202ENST00000395736 ZBED9Q6R2W3 1325 aa13.7□□□□□ -0.22
TOM1-202ENST00000395736 PNMA6EA0A0J9YXQ4 647 aa13.7□□□□□ -0.22
TOM1-202ENST00000395736 TCP10L2B9ZVM9 353 aa13.7□□□□□ -0.22
TOM1-202ENST00000395736 IPO8O15397 1037 aaKnown RBP13.7□□□□□ -0.22
TOM1-202ENST00000395736 USP2O75604 605 aaPredicted RBP13.7□□□□□ -0.22
TOM1-202ENST00000395736 NOM1Q5C9Z4 860 aaKnown RBP13.7□□□□□ -0.22
TOM1-202ENST00000395736 SPRYD7Q5W111 196 aa13.7□□□□□ -0.22
TOM1-202ENST00000395736 APOBEC3HQ6NTF7 200 aaKnown RBP13.7□□□□□ -0.22
TOM1-202ENST00000395736 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
TOM1-202ENST00000395736 TEKT1Q969V4 418 aa13.7□□□□□ -0.22
TOM1-202ENST00000395736 ZDHHC15Q96MV8 337 aa13.7□□□□□ -0.22
TOM1-202ENST00000395736 TMEM39BQ9GZU3 492 aa13.7□□□□□ -0.22
TOM1-202ENST00000395736 HDAC5Q9UQL6 1122 aa13.7□□□□□ -0.22
TOM1-202ENST00000395736 H0YGN5 161 aa13.69□□□□□ -0.22
TOM1-202ENST00000395736 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
TOM1-202ENST00000395736 PRDX5P30044 214 aa13.69□□□□□ -0.22
TOM1-202ENST00000395736 GJA5P36382 358 aa13.69□□□□□ -0.22
TOM1-202ENST00000395736 TM4SF4P48230 202 aa13.69□□□□□ -0.22
TOM1-202ENST00000395736 TNFAIP1Q13829 316 aa13.69□□□□□ -0.22
TOM1-202ENST00000395736 SUPT20HL1Q3ZLR7 823 aa13.69□□□□□ -0.22
TOM1-202ENST00000395736 ZKSCAN2Q63HK3 967 aa13.69□□□□□ -0.22
TOM1-202ENST00000395736 SUGT1Q9Y2Z0 365 aa13.69□□□□□ -0.22
TOM1-202ENST00000395736 MAST3O60307 1309 aa13.68□□□□□ -0.22
TOM1-202ENST00000395736 SALL1Q9NSC2 1324 aa13.68□□□□□ -0.22
TOM1-202ENST00000395736 ZBTB22O15209 634 aa13.68□□□□□ -0.22
TOM1-202ENST00000395736 GNAI2P04899 355 aa13.68□□□□□ -0.22
TOM1-202ENST00000395736 RLBP1P12271 317 aa13.68□□□□□ -0.22
TOM1-202ENST00000395736 TIMM10P62072 90 aa13.68□□□□□ -0.22
TOM1-202ENST00000395736 TFCP2Q12800 502 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms